EY659263

Overview
NameEY659263
Unique NameEY659263
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659263 vs. ExPASy Swiss-Prot
Match: ETFB_ARATH (Electron transfer flavoprotein subunit beta, mitochondrial OS=Arabidopsis thaliana GN=ETFB PE=1 SV=1)

HSP 1 Score: 372.474 bits (955), Expect = 1.848e-102
Identity = 186/242 (76.86%), Postives = 208/242 (85.95%), Query Frame = 1
Query:   31 MVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMNAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKLGLYYLLVKSSXDS*K 756
            +VA+KRVVDYAVKIRVK D+TGVET NVKMSMNPFCEIALEEALRIKE+G A EV+AVS+GP+QCVDTLRTGLAMGADRG+HVE      PLT+AKILKSL +VE PGLI LGKQAIDDDCNQTGQMVA LL WPQ TFASKVVLDK+K +A V+REVDGGLETL +DLPAVITTDLRLNQPRYA+LPNIM AKSKPIKK T Q+L VD+KSD+E+++VTEPPKRK G+    V    D  K
Sbjct:    4 LVAVKRVVDYAVKIRVKPDKTGVETQNVKMSMNPFCEIALEEALRIKEAGFAKEVIAVSIGPSQCVDTLRTGLAMGADRGIHVETNSIFLPLTIAKILKSLADVENPGLIFLGKQAIDDDCNQTGQMVAALLGWPQATFASKVVLDKDKNVATVDREVDGGLETLNVDLPAVITTDLRLNQPRYASLPNIMKAKSKPIKKMTVQDLKVDIKSDIEILEVTEPPKRKSGVMVSSVDELIDKLK 245          
BLAST of EY659263 vs. ExPASy Swiss-Prot
Match: ETFB_ORYSJ (Electron transfer flavoprotein subunit beta, mitochondrial OS=Oryza sativa subsp. japonica GN=ETFB PE=3 SV=1)

HSP 1 Score: 342.813 bits (878), Expect = 1.568e-93
Identity = 177/252 (70.24%), Postives = 209/252 (82.94%), Query Frame = 1
Query:   31 MVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHV----EAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMNAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKLGLYYLLVKSSXDS*K*SPRHL 774
            +VA+KRVVDYAVK+RV+ DRTGVET +VKMSMNPFCEIA+EEALR++ESG A+EVVA ++GP+Q  DTLRT LAMGADR VHV    + +  L PL VAKIL++L   E PGL+ILGKQAIDDDCNQTGQM+AGLL+WPQGTFASKV+L+KEK  A VEREVDGG+ET+ LDLPAVITTDLRLNQPRYATLPNIM AKSK IKK TP++L+VD++SD+EV++VTEPPKRK G+    V    D  K   R L
Sbjct:    4 LVAVKRVVDYAVKVRVRPDRTGVETASVKMSMNPFCEIAVEEALRLRESGAATEVVAATVGPSQSADTLRTALAMGADRAVHVLHDPDPSRPLLPLAVAKILRALALQENPGLVILGKQAIDDDCNQTGQMLAGLLNWPQGTFASKVILNKEK--ATVEREVDGGIETISLDLPAVITTDLRLNQPRYATLPNIMKAKSKVIKKVTPEDLDVDIRSDMEVVEVTEPPKRKAGVILSSVDELVDRLKNEARVL 253          
BLAST of EY659263 vs. ExPASy Swiss-Prot
Match: ETFB_ORYSI (Electron transfer flavoprotein subunit beta, mitochondrial OS=Oryza sativa subsp. indica GN=ETFB PE=3 SV=1)

HSP 1 Score: 341.658 bits (875), Expect = 3.494e-93
Identity = 176/252 (69.84%), Postives = 209/252 (82.94%), Query Frame = 1
Query:   31 MVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHV----EAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMNAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKLGLYYLLVKSSXDS*K*SPRHL 774
            +VA+KRVVDYAVK+RV+ DRTGVET +VKMSMNPFCEIA+EEALR++E+G A+EVVA ++GP+Q  DTLRT LAMGADR VHV    + +  L PL VAKIL++L   E PGL+ILGKQAIDDDCNQTGQM+AGLL+WPQGTFASKV+L+KEK  A VEREVDGG+ET+ LDLPAVITTDLRLNQPRYATLPNIM AKSK IKK TP++L+VD++SD+EV++VTEPPKRK G+    V    D  K   R L
Sbjct:    4 LVAVKRVVDYAVKVRVRPDRTGVETASVKMSMNPFCEIAVEEALRLREAGAATEVVAATVGPSQSADTLRTALAMGADRAVHVLHDPDPSRPLLPLAVAKILRALALQENPGLVILGKQAIDDDCNQTGQMLAGLLNWPQGTFASKVILNKEK--ATVEREVDGGIETISLDLPAVITTDLRLNQPRYATLPNIMKAKSKVIKKVTPEDLDVDIRSDMEVVEVTEPPKRKAGVILSSVDELIDRLKNEARVL 253          
BLAST of EY659263 vs. ExPASy Swiss-Prot
Match: ETFB_PONAB (Electron transfer flavoprotein subunit beta OS=Pongo abelii GN=ETFB PE=2 SV=3)

HSP 1 Score: 301.212 bits (770), Expect = 5.233e-81
Identity = 155/238 (65.13%), Postives = 184/238 (77.31%), Query Frame = 1
Query:   16 AEMIEMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEA----AGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMNAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKLGL 717
            AE+  +VA+KRV+DYAVKIRVK DRTGV T+ VK SMNPFCEIA+EEA+R+KE  L  EV+AVS GPAQC +T+RT LAMGADRG+HVE     A +L PL VA++L  L E EK  L++LGKQAIDDDCNQTGQM AG L WPQGTFAS+V L+ +K    VERE+DGGLETL L LPAV+T DLRLN+PRYATLPNIM AK K I+   P +L VD+ S L VI V +PP+R  G+
Sbjct:    2 AELRALVAVKRVIDYAVKIRVKPDRTGVVTDGVKHSMNPFCEIAVEEAVRLKEKKLVKEVIAVSCGPAQCQETIRTALAMGADRGIHVEVPPAEAERLGPLQVARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQVTLEGDK--LKVEREIDGGLETLRLKLPAVVTADLRLNEPRYATLPNIMKAKKKKIEVIKPGDLGVDLTSKLSVISVEDPPQRTAGV 237          
BLAST of EY659263 vs. ExPASy Swiss-Prot
Match: ETFB_HUMAN (Electron transfer flavoprotein subunit beta OS=Homo sapiens GN=ETFB PE=1 SV=3)

HSP 1 Score: 300.827 bits (769), Expect = 6.835e-81
Identity = 155/238 (65.13%), Postives = 184/238 (77.31%), Query Frame = 1
Query:   16 AEMIEMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEA----AGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMNAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKLGL 717
            AE+  +VA+KRV+DYAVKIRVK DRTGV T+ VK SMNPFCEIA+EEA+R+KE  L  EV+AVS GPAQC +T+RT LAMGADRG+HVE     A +L PL VA++L  L E EK  L++LGKQAIDDDCNQTGQM AG L WPQGTFAS+V L+ +K    VERE+DGGLETL L LPAV+T DLRLN+PRYATLPNIM AK K I+   P +L VD+ S L VI V +PP+R  G+
Sbjct:    2 AELRVLVAVKRVIDYAVKIRVKPDRTGVVTDGVKHSMNPFCEIAVEEAVRLKEKKLVKEVIAVSCGPAQCQETIRTALAMGADRGIHVEVPPAEAERLGPLQVARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQVTLEGDK--LKVEREIDGGLETLRLKLPAVVTADLRLNEPRYATLPNIMKAKKKKIEVIKPGDLGVDLTSKLSVISVEDPPQRTAGV 237          
BLAST of EY659263 vs. ExPASy Swiss-Prot
Match: ETFB_DICDI (Electron transfer flavoprotein subunit beta OS=Dictyostelium discoideum GN=etfb PE=3 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 2.199e-79
Identity = 149/229 (65.07%), Postives = 180/229 (78.60%), Query Frame = 1
Query:   31 MVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMNAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKLGL 717
            +V IKRVVDYAVKIRVK D++GVET NVKMSMNPF EIA+EEA+RIKE  LA E++AVSMGP    +T+RT +AMGAD+G+HVE   +L PL+VAK+LK LV+ EKP LIILGKQAIDDDCNQT QM+AGLL+WPQ TFASKV  D +     V RE+DGGLETL + LPA+I+ DLRLN+PRYA L NIM +K   +K  TP+ LNVD   +L++I V EPPKR  G+
Sbjct:    6 LVPIKRVVDYAVKIRVKGDKSGVETANVKMSMNPFDEIAVEEAIRIKEKNLAKEIIAVSMGPKTSQETIRTAIAMGADKGIHVETTAELQPLSVAKLLKELVDKEKPNLIILGKQAIDDDCNQTAQMLAGLLNWPQATFASKV--DIKDDSVHVTREIDGGLETLSMKLPAIISCDLRLNEPRYAKLQNIMKSKKAELKVETPESLNVDTNCNLKIISVEEPPKRSGGV 232          
BLAST of EY659263 vs. ExPASy Swiss-Prot
Match: ETFB_BOVIN (Electron transfer flavoprotein subunit beta OS=Bos taurus GN=ETFB PE=2 SV=3)

HSP 1 Score: 295.434 bits (755), Expect = 2.872e-79
Identity = 151/238 (63.45%), Postives = 182/238 (76.47%), Query Frame = 1
Query:   16 AEMIEMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEA----AGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMNAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKLGL 717
            AE+  +VA+KRV+D+AVKIRVK D+TGV T+ VK SMNPFCEIA+EEA+R+KE  L  E++AVS GPAQC +T+RT LAMGADRG+HVE     A  L PL VA++L  L E EK  L++LGKQAIDDDCNQTGQM AG L WPQGTFAS+V L+ +K    VERE+DGGLETL L LPAV+T DLRLN+PRYATLPNIM AK K I+     +L VD+ S L VI V +PP+R  G+
Sbjct:    2 AELRALVAVKRVIDFAVKIRVKPDKTGVVTDGVKHSMNPFCEIAVEEAVRLKEKKLVKEIIAVSCGPAQCQETIRTALAMGADRGIHVEVPAAEANHLGPLQVARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQVTLEGDK--IKVEREIDGGLETLRLKLPAVVTADLRLNEPRYATLPNIMKAKKKKIEVIKAGDLGVDLTSKLSVISVEDPPQRTAGV 237          
BLAST of EY659263 vs. ExPASy Swiss-Prot
Match: ETFB_MOUSE (Electron transfer flavoprotein subunit beta OS=Mus musculus GN=Etfb PE=1 SV=3)

HSP 1 Score: 293.893 bits (751), Expect = 8.355e-79
Identity = 150/238 (63.03%), Postives = 182/238 (76.47%), Query Frame = 1
Query:   16 AEMIEMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAG----QLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMNAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKLGL 717
            AE+  +VA+KRV+D+AVKIRVK D++GV T+ VK SMNPFCEIA+EEA+R+KE  L  E++AVS GP+QC +T+RT LAMGADRG+HVE  G     L PL VA++L  L E EK  L+ LGKQAIDDDCNQTGQM AGLL WPQGTFAS+V L+ +K    VERE+DGGLETL L LPAV+T DLRLN+PRYATLPNIM AK K I+     +L VD+ S + VI V EPP+R  G+
Sbjct:    2 AELRALVAVKRVIDFAVKIRVKPDKSGVVTDGVKHSMNPFCEIAVEEAVRLKEKKLVKEIIAVSCGPSQCQETIRTALAMGADRGIHVEIPGAQAESLGPLQVARVLAKLAEKEKVDLLFLGKQAIDDDCNQTGQMTAGLLDWPQGTFASQVTLEGDK--VKVEREIDGGLETLRLKLPAVVTADLRLNEPRYATLPNIMKAKKKKIEVVKAGDLGVDLTSKVSVISVEEPPQRSAGV 237          
BLAST of EY659263 vs. ExPASy Swiss-Prot
Match: ETFB_PIG (Electron transfer flavoprotein subunit beta OS=Sus scrofa GN=ETFB PE=2 SV=3)

HSP 1 Score: 292.352 bits (747), Expect = 2.431e-78
Identity = 150/238 (63.03%), Postives = 181/238 (76.05%), Query Frame = 1
Query:   16 AEMIEMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEA----AGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMNAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKLGL 717
            AE+  +VA+KRV+D+AVKIRVK DRTGV  + VK SMNPFCEIA+EEA+R+KE  L  EV+AVS GPAQC +T+RT LAMGADRG+HVE     A  L PL VA++L  L + EK  L++LGKQAIDDDCNQTGQM AG L WPQGTFAS+V L+ +K    VERE+DGGLETL L LPAV+T DLRLN+PRYATLPNIM AK K I+     +L VD+ S L V+ V +PP+R  G+
Sbjct:    2 AELRALVAVKRVIDFAVKIRVKPDRTGVVMDGVKHSMNPFCEIAVEEAVRLKEKKLVKEVIAVSCGPAQCQETIRTALAMGADRGIHVEVPAAEAHHLGPLQVARVLAKLAQKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQVTLEGDK--VKVEREIDGGLETLRLKLPAVVTADLRLNEPRYATLPNIMKAKKKKIEVIKAGDLGVDLTSKLSVVSVEDPPQRVAGV 237          
BLAST of EY659263 vs. ExPASy Swiss-Prot
Match: ETFB_RAT (Electron transfer flavoprotein subunit beta OS=Rattus norvegicus GN=Etfb PE=2 SV=3)

HSP 1 Score: 291.967 bits (746), Expect = 3.175e-78
Identity = 149/238 (62.61%), Postives = 181/238 (76.05%), Query Frame = 1
Query:   16 AEMIEMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAG----QLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMNAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKLGL 717
            AE+  +VA+KRV+D+AVKIRVK D++GV T+ VK SMNPFCEIA+EEA+R+KE  L  E++AVS GP QC +T+RT LAMGADRG+HVE  G     L PL VA++L  L E EK  L+ LGKQAIDDDCNQTGQM AGLL WPQGTFAS+V L+ +K    VERE+DGGLET+ L LPAV+T DLRLN+PRYATLPNIM AK K I+     +L VD+ S + VI V EPP+R  G+
Sbjct:    2 AELRALVAVKRVIDFAVKIRVKPDKSGVVTDGVKHSMNPFCEIAVEEAVRLKEKKLVKEIIAVSCGPPQCQETIRTALAMGADRGIHVEVPGAEAENLGPLQVARVLAKLAEKEKVDLLFLGKQAIDDDCNQTGQMTAGLLDWPQGTFASQVTLEGDK--VKVEREIDGGLETIRLKLPAVVTADLRLNEPRYATLPNIMKAKKKKIEVIKAGDLGVDLTSKVSVISVEEPPQRLAGV 237          
The following BLAST results are available for this feature:
BLAST of EY659263 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
ETFB_ARATH1.848e-10276.86Electron transfer flavoprotein subunit beta, mitoc... [more]
ETFB_ORYSJ1.568e-9370.24Electron transfer flavoprotein subunit beta, mitoc... [more]
ETFB_ORYSI3.494e-9369.84Electron transfer flavoprotein subunit beta, mitoc... [more]
ETFB_PONAB5.233e-8165.13Electron transfer flavoprotein subunit beta OS=Pon... [more]
ETFB_HUMAN6.835e-8165.13Electron transfer flavoprotein subunit beta OS=Hom... [more]
ETFB_DICDI2.199e-7965.07Electron transfer flavoprotein subunit beta OS=Dic... [more]
ETFB_BOVIN2.872e-7963.45Electron transfer flavoprotein subunit beta OS=Bos... [more]
ETFB_MOUSE8.355e-7963.03Electron transfer flavoprotein subunit beta OS=Mus... [more]
ETFB_PIG2.431e-7863.03Electron transfer flavoprotein subunit beta OS=Sus... [more]
ETFB_RAT3.175e-7862.61Electron transfer flavoprotein subunit beta OS=Rat... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-B10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659263 ID=EY659263; Name=EY659263; organism=Citrus sinensis; type=EST; length=899bp
TCGGCAACAACGGCAGCCGAAATGATAGAAATGGTGGCAATAAAGCGAGT
CGTTGACTACGCCGTCAAGATCAGGGTGAAATCCGACAGGACAGGAGTGG
AGACAAACAACGTTAAGATGTCGATGAACCCCTTTTGCGAGATAGCGCTG
GAGGAGGCTCTGAGGATCAAGGAATCTGGATTGGCTTCCGAGGTTGTCGC
CGTCAGCATGGGCCCCGCCCAGTGCGTTGATACTCTACGGACGGGTTTAG
CTATGGGTGCTGATAGAGGAGTCCACGTGGAGGCTGCCGGTCAGCTGTAT
CCTTTGACTGTTGCCAAGATTTTGAAGAGCCTTGTTGAGGTTGAGAAGCC
TGGCTTGATTATTCTGGGAAAGCAGGCAATTGATGATGACTGCAATCAAA
CAGGGCAAATGGTTGCAGGGCTACTCAGCTGGCCGCAGGGAACCTTTGCT
TCTAAGGTTGTGCTGGATAAGGAAAAACAATTAGCAATGGTGGAGAGAGA
AGTAGATGGTGGTCTTGAGACTTTAGAATTGGATTTACCAGCTGTAATCA
CCACTGATTTGAGACTCAACCAACCGAGGTACGCGACACTCCCCAACATA
ATGAACGCAAAATCGAAACCAATAAAGAAATATACTCCCCAGGAGCTAAA
CGTGGATGTCAAATCTGATTTGGAGGTGATTCAAGTAACAGAACCTCCCA
AGAGAAAGCTGGGGTTATATTATCTTCTGGTGAAGAGCTCATTNGACAGC
TAAAAATGAAGCCCGCGTCATTTAAACTTTCTTTGTAACTGTTATTCCCA
TCGAAATACTAGAACAAAAATTAAGAACTTCAGGCGTCAAATAAATAGCC
TTAGTTCAAATAGAGTATGGCCTCAAAATGCAGATTGGCCTGCCATGCT
back to top