EY659256

Overview
NameEY659256
Unique NameEY659256
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length939
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CESA8_ORYSJ (Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.796e-29
Identity = 63/69 (91.30%), Postives = 66/69 (95.65%), Query Frame = 1
Query:   28 GAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEV 234
            GAGFDDEKSLLMSQMSLEKRFGQSA FVASTLME GGVPQSAT E+LLKEAIHVISCGYEDKTEWG+E+
Sbjct:  703 GAGFDDEKSLLMSQMSLEKRFGQSAAFVASTLMEYGGVPQSATPESLLKEAIHVISCGYEDKTEWGTEI 771          

HSP 2 Score: 119.783 bits (299), Expect = 2.303e-26
Identity = 64/113 (56.64%), Postives = 74/113 (65.49%), Query Frame = 1
Query:  508 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXRGL*XLWKFFSVGTVLSG--MVWWS----IEIS*EVCLC*HHYHSLTAIPLLMYCTLPTVC 828
            +IGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPA  GSAPINLSDRLNQ  R     W   SV  + S    +W+     ++            + LT+IPLL+YC LP +C
Sbjct:  770 EIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLR-----WALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLIYCVLPAIC 877          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CESA3_ARATH (Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 2.461e-28
Identity = 61/69 (88.41%), Postives = 65/69 (94.20%), Query Frame = 1
Query:   28 GAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEV 234
            GAGFDDEK+LLMSQMSLEKRFGQSAVFVASTLMENGGVP SAT E LLKEAIHVISCGYEDK++WG E+
Sbjct:  687 GAGFDDEKALLMSQMSLEKRFGQSAVFVASTLMENGGVPPSATPENLLKEAIHVISCGYEDKSDWGMEI 755          

HSP 2 Score: 120.939 bits (302), Expect = 1.034e-26
Identity = 65/114 (57.02%), Postives = 75/114 (65.79%), Query Frame = 1
Query:  505 LQIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXRGL*XLWKFFSVGTVLSG--MVWWS----IEIS*EVCLC*HHYHSLTAIPLLMYCTLPTVC 828
            ++IGWIYGSVTEDILTGFKMHARGWRSIYCMPK PA  GSAPINLSDRLNQ  R     W   SV  + S    +W+     ++            + +T+IPLLMYCTLP VC
Sbjct:  753 MEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKLPAFKGSAPINLSDRLNQVLR-----WALGSVEILFSRHCPIWYGYNGRLKFLERFAYVNTTIYPITSIPLLMYCTLPAVC 861          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSJ (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.197e-28
Identity = 60/69 (86.96%), Postives = 67/69 (97.10%), Query Frame = 1
Query:   28 GAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEV 234
            G+GFDDEKSLLMSQMSLEKRFGQS+VFVASTLME GGVPQSAT E+LLKEAIHVISCGYEDK++WG+E+
Sbjct:  695 GSGFDDEKSLLMSQMSLEKRFGQSSVFVASTLMEYGGVPQSATPESLLKEAIHVISCGYEDKSDWGTEI 763          

HSP 2 Score: 119.783 bits (299), Expect = 2.303e-26
Identity = 64/113 (56.64%), Postives = 74/113 (65.49%), Query Frame = 1
Query:  508 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXRGL*XLWKFFSVGTVLSG--MVWWS----IEIS*EVCLC*HHYHSLTAIPLLMYCTLPTVC 828
            +IGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPA  GSAPINLSDRLNQ  R     W   SV  + S    +W+     ++            + LT+IPLL+YC LP +C
Sbjct:  762 EIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLR-----WALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLLYCILPAIC 869          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSI (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.197e-28
Identity = 60/69 (86.96%), Postives = 67/69 (97.10%), Query Frame = 1
Query:   28 GAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEV 234
            G+GFDDEKSLLMSQMSLEKRFGQS+VFVASTLME GGVPQSAT E+LLKEAIHVISCGYEDK++WG+E+
Sbjct:  695 GSGFDDEKSLLMSQMSLEKRFGQSSVFVASTLMEYGGVPQSATPESLLKEAIHVISCGYEDKSDWGTEI 763          

HSP 2 Score: 119.783 bits (299), Expect = 2.303e-26
Identity = 64/113 (56.64%), Postives = 74/113 (65.49%), Query Frame = 1
Query:  508 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXRGL*XLWKFFSVGTVLSG--MVWWS----IEIS*EVCLC*HHYHSLTAIPLLMYCTLPTVC 828
            +IGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPA  GSAPINLSDRLNQ  R     W   SV  + S    +W+     ++            + LT+IPLL+YC LP +C
Sbjct:  762 EIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLR-----WALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLLYCILPAIC 869          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.651e-24
Identity = 60/113 (53.10%), Postives = 74/113 (65.49%), Query Frame = 1
Query:  508 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXRGL*XLWKFFSVGTVLSG--MVWWS----IEIS*EVCLC*HHYHSLTAIPLLMYCTLPTVC 828
            +IGWIYGSVTEDILTGF+MH RGW+S+YCMPKRPA  GSAPINLSDRL+Q  R     W   SV    S    +W++    ++I   +       +  T+IPLL YCT+P VC
Sbjct:  737 EIGWIYGSVTEDILTGFRMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLR-----WALGSVEIFFSRHCPLWYAWGGKLKILERLAYINTIVYPFTSIPLLAYCTIPAVC 844          

HSP 2 Score: 99.3673 bits (246), Expect = 3.221e-20
Identity = 46/68 (67.65%), Postives = 57/68 (83.82%), Query Frame = 1
Query:   34 GFDD-EKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEV 234
            G+D+ EKS LMSQ + EKRFG S VF+ASTLMENGG+P++    +L+KEAIHVISCGYE+KTEWG E+
Sbjct:  671 GYDELEKSSLMSQKNFEKRFGMSPVFIASTLMENGGLPEATNTSSLIKEAIHVISCGYEEKTEWGKEI 738          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSJ (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.156e-24
Identity = 63/114 (55.26%), Postives = 74/114 (64.91%), Query Frame = 1
Query:  505 LQIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXR-GL*XLWKFFSVGTVL-----SGMVWWSIEIS*EVCLC*HHYHSLTAIPLLMYCTLPTVC 828
            L++GWIYGS+TEDILTGFKMH RGWRS+YCMPKR A  GSAPINLSDRLNQ  R  L  +  FFS  + L     +G + W    S          +  T++PLL YCTLP VC
Sbjct:  741 LELGWIYGSITEDILTGFKMHCRGWRSVYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLLYGYKNGNLKWLERFS----YINTTIYPFTSLPLLAYCTLPAVC 850          

HSP 2 Score: 103.99 bits (258), Expect = 1.308e-21
Identity = 49/70 (70.00%), Postives = 56/70 (80.00%), Query Frame = 1
Query:   25 AGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEV 234
            A  G D +K +LMSQM+ EKRFGQSA FV STLME GGVP S++   LLKEAIHVISCGYEDKT+WG E+
Sbjct:  674 ADGGMDSDKEMLMSQMNFEKRFGQSAAFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYEDKTDWGLEL 743          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSI (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.156e-24
Identity = 63/114 (55.26%), Postives = 74/114 (64.91%), Query Frame = 1
Query:  505 LQIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXR-GL*XLWKFFSVGTVL-----SGMVWWSIEIS*EVCLC*HHYHSLTAIPLLMYCTLPTVC 828
            L++GWIYGS+TEDILTGFKMH RGWRS+YCMPKR A  GSAPINLSDRLNQ  R  L  +  FFS  + L     +G + W    S          +  T++PLL YCTLP VC
Sbjct:  741 LELGWIYGSITEDILTGFKMHCRGWRSVYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLLYGYKNGNLKWLERFS----YINTTIYPFTSLPLLAYCTLPAVC 850          

HSP 2 Score: 103.99 bits (258), Expect = 1.308e-21
Identity = 49/70 (70.00%), Postives = 56/70 (80.00%), Query Frame = 1
Query:   25 AGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEV 234
            A  G D +K +LMSQM+ EKRFGQSA FV STLME GGVP S++   LLKEAIHVISCGYEDKT+WG E+
Sbjct:  674 ADGGMDSDKEMLMSQMNFEKRFGQSAAFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYEDKTDWGLEL 743          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.156e-24
Identity = 62/114 (54.39%), Postives = 71/114 (62.28%), Query Frame = 1
Query:  508 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXRGL*XLWKFFSVGTVLS--GMVWWSIEIS*EVCLC*HHY-----HSLTAIPLLMYCTLPTVC 828
            ++GWIYGS+TEDILTGFKMH RGWRSIYCMPKRPA  GSAPINLSDRLNQ  R     W   SV    S    +W+  +      L    Y     +  T+IPLL YC LP +C
Sbjct:  715 ELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRPAFKGSAPINLSDRLNQVLR-----WALGSVEIFFSRHSPLWYGYKGGKLKWLERFAYANTTIYPFTSIPLLAYCILPAIC 823          

HSP 2 Score: 97.0561 bits (240), Expect = 1.599e-19
Identity = 45/67 (67.16%), Postives = 55/67 (82.09%), Query Frame = 1
Query:   34 GFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEV 234
            G + +K  LMS+M+ EK FGQS++FV STLME GGVP S++   LLKEAIHVISCGYEDKTEWG+E+
Sbjct:  650 GAEGDKEHLMSEMNFEKTFGQSSIFVTSTLMEEGGVPPSSSPAVLLKEAIHVISCGYEDKTEWGTEL 716          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSJ (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.156e-24
Identity = 60/113 (53.10%), Postives = 73/113 (64.60%), Query Frame = 1
Query:  508 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXRGL*XLWKFFSVGTVLSG--MVWWS----IEIS*EVCLC*HHYHSLTAIPLLMYCTLPTVC 828
            +IGWIYGSVTEDILTGFKMHARGW SIYCMP RP   GSAPINLSDRLNQ  R     W   SV  +LS    +W+     +++   +       + +T+IPL+ YC LP +C
Sbjct:  764 EIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPCFKGSAPINLSDRLNQVLR-----WALGSVEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITSIPLIAYCVLPAIC 871          

HSP 2 Score: 102.834 bits (255), Expect = 2.913e-21
Identity = 46/67 (68.66%), Postives = 55/67 (82.09%), Query Frame = 1
Query:   34 GFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEV 234
            G++DE+S+LMSQ  LEKRFGQS +F+AST M  GG+P S    +LLKEAIHVISCGYEDKTEWG E+
Sbjct:  699 GYEDERSVLMSQKRLEKRFGQSPIFIASTFMTQGGIPPSTNPASLLKEAIHVISCGYEDKTEWGKEI 765          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.156e-24
Identity = 60/113 (53.10%), Postives = 73/113 (64.60%), Query Frame = 1
Query:  508 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXRGL*XLWKFFSVGTVLSG--MVWWS----IEIS*EVCLC*HHYHSLTAIPLLMYCTLPTVC 828
            +IGWIYGSVTEDILTGFKMHARGW SIYCMP RP   GSAPINLSDRLNQ  R     W   SV  +LS    +W+     +++   +       + +T+IPL+ YC LP +C
Sbjct:  764 EIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPCFKGSAPINLSDRLNQVLR-----WALGSVEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITSIPLIAYCVLPAIC 871          

HSP 2 Score: 102.834 bits (255), Expect = 2.913e-21
Identity = 46/67 (68.66%), Postives = 55/67 (82.09%), Query Frame = 1
Query:   34 GFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATHETLLKEAIHVISCGYEDKTEWGSEV 234
            G++DE+S+LMSQ  LEKRFGQS +F+AST M  GG+P S    +LLKEAIHVISCGYEDKTEWG E+
Sbjct:  699 GYEDERSVLMSQKRLEKRFGQSPIFIASTFMTQGGIPPSTNPASLLKEAIHVISCGYEDKTEWGKEI 765          
The following BLAST results are available for this feature:
BLAST of EY659256 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
CESA8_ORYSJ3.796e-2991.30Probable cellulose synthase A catalytic subunit 8 ... [more]
CESA3_ARATH2.461e-2888.41Cellulose synthase A catalytic subunit 3 [UDP-form... [more]
CESA2_ORYSJ4.197e-2886.96Probable cellulose synthase A catalytic subunit 2 ... [more]
CESA2_ORYSI4.197e-2886.96Probable cellulose synthase A catalytic subunit 2 ... [more]
CESA4_ARATH1.651e-2453.10Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA9_ORYSJ2.156e-2455.26Cellulose synthase A catalytic subunit 9 [UDP-form... [more]
CESA9_ORYSI2.156e-2455.26Cellulose synthase A catalytic subunit 9 [UDP-form... [more]
CESA7_ARATH2.156e-2454.39Cellulose synthase A catalytic subunit 7 [UDP-form... [more]
CESA1_ORYSJ2.156e-2453.10Probable cellulose synthase A catalytic subunit 1 ... [more]
CESA1_ORYSI2.156e-2453.10Probable cellulose synthase A catalytic subunit 1 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-B03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659256 ID=EY659256; Name=EY659256; organism=Citrus sinensis; type=EST; length=939bp
CCACGCGTCCGCATATTTGCCTACGCAGGTGCTGGATTTGATGATGAAAA
GTCACTACTTATGTCACAAATGAGCCTGGAGAAGCGATTTGGTCAATCAG
CTGTTTTTGTTGCTTCTACACTTATGGAGAATGGTGGTGTTCCACAGTCT
GCAACACATGAAACTCTTCTTAAGGAGGCCATTCATGTTATCAGTTGTGG
TTACGAGGATAAAACAGAATGGGGATCTGAGGTATGTTGTCTGATTTAAC
AGACACTGATGTATTTCCAAGTTTCTGTCTATATAAAGTGACTGTGTGAA
TCTAAGCAACTGAAATGACTCATTGTTCATCGAACCATTTCTACTATGCT
ACTGAATGACCCCTTGCGATGTTATTATAATTCCAGTTCATCTGTAAATA
ATATGGCACACCCACCAACACACATTTCTTATTGAAGAAATAACTTGCAT
TCTCTTTGTTATCATTTCAGTTTCTCTTGCAAACACCGATTTTTGTCTCT
TGCTCTGCAGATAGGATGGATTTATGGTTCTGTTACGGAAGATATTCTTA
CAGGATTCAAGATGCATGCCCGTGGTTGGCGGTCAATTTACTGCATGCCT
AAGCGCCCAGCCCTTTAAGGGTCTGCTCCTATTAATCTTTCAGATCGTCT
AAACCAGTGCTNNCGTGGGCTCTAGGNTCTGTGGAAATTCTTTTCAGTCG
GCACTGTCCTATCTGGTATGGTATGGTGGTCGATTGAAATTTCTTGAGAA
GTTTGCCTATGTTGACACCACTATCATTCTCTCACTGCAATTCCTCTTCT
CATGTATTGCACGCTGCCAACTGTCTGTCTATTAACGAACAGTTCATTAT
GCTCAAGTATTTNATCATTACCATTACTCACTTTTTACCTTTTTATTTTT
CAGGTTGTGAAAATGACTCCTACCCTAAATTCTTTTGTT
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