EY659248
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659248 vs. ExPASy Swiss-Prot
Match: FAD3C_SESIN (Omega-3 fatty acid desaturase, chloroplastic OS=Sesamum indicum GN=FAD7 PE=2 SV=1) HSP 1 Score: 491.886 bits (1265), Expect = 2.102e-138 Identity = 229/283 (80.92%), Postives = 245/283 (86.57%), Query Frame = 2 Query: 2 WALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGWLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIESTEAARPVLGNXTVSQRNRXRYXLTFLGD*XKHG*R-HYVSDMGDWCYYQTDHSLT 847 WALFVLGHDCGHGSFSND KLNSVVGH+LHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIY+ LD+AT+ LRF +PFPLLAYP YLWSRSPGK GSHF P+SDLFVP+E+KDVITSTVCWTAM ALLVGLSFV+GP+QLLKLYG+PY VMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRG LTTLDRDYGW NNIHHDIGTHVIHHLFPQIPHYHLIE+TEAA+PVLG + LGD + R HYVSD+GD YYQTD LT Sbjct: 160 WALFVLGHDCGHGSFSNDPKLNSVVGHILHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYKNLDTATKKLRFTLPFPLLAYPIYLWSRSPGKQGSHFHPDSDLFVPNEKKDVITSTVCWTAMLALLVGLSFVIGPVQLLKLYGIPYLGNVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYREPKKSAPLPFHLLGDLTRSLKRDHYVSDVGDVVYYQTDPQLT 442
BLAST of EY659248 vs. ExPASy Swiss-Prot
Match: FAD3C_RICCO (Omega-3 fatty acid desaturase, chloroplastic OS=Ricinus communis GN=FAD7A-1 PE=2 SV=1) HSP 1 Score: 481.871 bits (1239), Expect = 2.175e-135 Identity = 219/283 (77.39%), Postives = 240/283 (84.81%), Query Frame = 2 Query: 2 WALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGWLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIESTEAARPVLGNXTVSQRNRXRYXLTFLGD*XKHG*R-HYVSDMGDWCYYQTDHSLT 847 WALFVLGHDCGHGSFSN+ KLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKI+++LD+ T+ LRF +PFP+LAYPFYLWSRSPGK GSHF P+S LFVP ERKD+ITST CWTAMAALLV L+F MGP+Q+LKLYG+PYWIFVMWLD VTYLHHHGHEDKLPWYRGK WSYLRG LTTLDRDYGW NNIHHDIGTHVIHHLFPQIPHYHL+E+TEAA+PV+G + L LG + HYVSD GD YYQ D L+ Sbjct: 170 WALFVLGHDCGHGSFSNNPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIFKSLDNVTKTLRFSLPFPMLAYPFYLWSRSPGKKGSHFHPDSGLFVPKERKDIITSTACWTAMAALLVYLNFSMGPVQMLKLYGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKAWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVMGKYYREPKKSGPLPLHLLGSLVRSMKEDHYVSDTGDVVYYQKDPKLS 452
BLAST of EY659248 vs. ExPASy Swiss-Prot
Match: FAD3D_ARATH (Temperature-sensitive omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD8 PE=2 SV=1) HSP 1 Score: 479.174 bits (1232), Expect = 1.410e-134 Identity = 215/282 (76.24%), Postives = 238/282 (84.40%), Query Frame = 2 Query: 2 WALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGWLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIESTEAARPVLGNXTVSQRNRXRYXLTFLGD*XKHG*R-HYVSDMGDWCYYQTDHSL 844 WALFVLGHDCGHGSFSND +LNSV GHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPL E IY+ L+ T+ RF +PFP+LAYPFYLW+RSPGK GSH+ P+SDLF+P E+KDV+TST CWTAMAALLV L+FVMGP+Q+LKLYG+PYWIFVMWLD VTYLHHHGHEDKLPWYRGKEWSYLRG LTTLDRDYGW NNIHHDIGTHVIHHLFPQIPHYHL+E+TEAA+PVLG +N L LG K + H+VSD GD YY+ D L Sbjct: 149 WALFVLGHDCGHGSFSNDPRLNSVAGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPESIYKNLEKTTQMFRFTLPFPMLAYPFYLWNRSPGKQGSHYHPDSDLFLPKEKKDVLTSTACWTAMAALLVCLNFVMGPIQMLKLYGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPKNSGPLPLHLLGSLIKSMKQDHFVSDTGDVVYYEADPKL 430
BLAST of EY659248 vs. ExPASy Swiss-Prot
Match: FAD3C_SOYBN (Omega-3 fatty acid desaturase, chloroplastic OS=Glycine max GN=FAD7 PE=2 SV=1) HSP 1 Score: 472.626 bits (1215), Expect = 1.320e-132 Identity = 218/283 (77.03%), Postives = 240/283 (84.81%), Query Frame = 2 Query: 2 WALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGWLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIESTEAARPVLGN-XTVSQRNRXRYXLTFLGD*XK-HG*RHYVSDMGDWCYYQTDHSL 844 WALFVLGHDCGHGSFSN+ KLNSVVGHLLHSSILVPYHGWRISHRTHHQ+HGH ENDESWHPL EK++R+LD+ TR LRF PFPLLA+P YL+SRSPGKTGSHFDP+SDLFVP+ERKDVITST CW AM LLVGL FVMGP+QLLKLYGVPY IFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRG LTTLDRDYGW NNIHHDIGTHVIHHLFPQIPHYHL+E+TEAA+PV G +++ +G+ + H+VSD GD YYQTD + Sbjct: 164 WALFVLGHDCGHGSFSNNSKLNSVVGHLLHSSILVPYHGWRISHRTHHQHHGHAENDESWHPLPEKLFRSLDTVTRMLRFTAPFPLLAFPVYLFSRSPGKTGSHFDPSSDLFVPNERKDVITSTACWAAMLGLLVGLGFVMGPIQLLKLYGVPYVIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVFGKYYREPKKSAAPLPFHLIGEIIRSFKTDHFVSDTGDVVYYQTDSKI 446
BLAST of EY659248 vs. ExPASy Swiss-Prot
Match: FAD3C_ARATH (Omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD7 PE=1 SV=1) HSP 1 Score: 466.077 bits (1198), Expect = 1.235e-130 Identity = 215/284 (75.70%), Postives = 235/284 (82.75%), Query Frame = 2 Query: 2 WALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGWLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIESTEAARPVLGNXTVSQRNR---XRYXLTFLGD*XKHG*RHYVSDMGDWCYYQTDHSL 844 WALFVLGHDCGHGSFSND KLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHP+SEKIY TLD TRF RF +P +LAYPFYLW+RSPGK GSH+ P+SDLF+P ERKDV+TST CWTAMAALLV L+F +GP+Q+LKLYG+PYWI VMWLD VTYLHHHGHEDKLPWYRGKEWSYLRG LTTLDRDYG NNIHHDIGTHVIHHLFPQIPHYHL+E+TEAA+PVLG + L L K HYVSD G+ YY+ D +L Sbjct: 156 WALFVLGHDCGHGSFSNDPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPMSEKIYNTLDKPTRFFRFTLPLVMLAYPFYLWARSPGKKGSHYHPDSDLFLPKERKDVLTSTACWTAMAALLVCLNFTIGPIQMLKLYGIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPDKSGPLPLHLLEILAKSIKED--HYVSDEGEVVYYKADPNL 437
BLAST of EY659248 vs. ExPASy Swiss-Prot
Match: FAD3C_BRANA (Omega-3 fatty acid desaturase, chloroplastic (Fragment) OS=Brassica napus GN=FAD7 PE=2 SV=1) HSP 1 Score: 464.922 bits (1195), Expect = 2.752e-130 Identity = 214/282 (75.89%), Postives = 234/282 (82.98%), Query Frame = 2 Query: 2 WALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGWLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIESTEAARPVLGNXTVSQRNRXRYXLTFLGD*XKH-G*RHYVSDMGDWCYYQTDHSL 844 WALFVLGHDCGHGSFSND +LNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHP+SEKIY++LD TRF RF +P +LAYPFYLW+RSPGK GSH+ P+SDLF+P ER DV+TST CWTAMA LLV L+FVMGPMQ+LKLY +PYWI VMWLD VTYLHHHGHEDKLPWYRGKEWSYLRG LTTLDRDYG NNIHHDIGTHVIHHLFPQIPHYHL+E+TEAA+PVLG L LG K H+VSD GD YY+ D +L Sbjct: 114 WALFVLGHDCGHGSFSNDPRLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPMSEKIYKSLDKPTRFFRFTLPLVMLAYPFYLWARSPGKKGSHYHPDSDLFLPKERNDVLTSTACWTAMAVLLVCLNFVMGPMQMLKLYVIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDHFVSDEGDVVYYEADPNL 395
BLAST of EY659248 vs. ExPASy Swiss-Prot
Match: FAD3E_SOYBN (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Glycine max GN=FAD3 PE=2 SV=1) HSP 1 Score: 431.024 bits (1107), Expect = 4.403e-120 Identity = 195/284 (68.66%), Postives = 225/284 (79.23%), Query Frame = 2 Query: 2 WALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGWLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIESTEAARPVLGNXTVSQRNRXR---YXLTFLGD*XKHG*RHYVSDMGDWCYYQTDHSL 844 WALFVLGHDCGHGSFS+ LNS+VGH+LHSSILVPYHGWRISHRTHHQNHGH+E DESW PL+EKIY+ LDS TR +RF +PFPL YP YL+SRSPGK GSHF+P S+LF PSERK + ST+CW M +LL+ LSF+ P+ +LKLYG+PYWIFVMWLD VTYLHHHGH KLPWYRGKEWSYLRG LTT+DRDYGW NIHHDIGTHVIHHLFPQIPHYHL+E+T+AA+PVLG+ + + +L + H+VSD GD YYQTD L Sbjct: 93 WALFVLGHDCGHGSFSDSPLLNSLVGHILHSSILVPYHGWRISHRTHHQNHGHIEKDESWVPLTEKIYKNLDSMTRLIRFTVPFPLFVYPIYLFSRSPGKEGSHFNPYSNLFPPSERKGIAISTLCWATMFSLLIYLSFITSPLLVLKLYGIPYWIFVMWLDFVTYLHHHGHHQKLPWYRGKEWSYLRGGLTTVDRDYGWIYNIHHDIGTHVIHHLFPQIPHYHLVEATQAAKPVLGDYYREPERSAPLPFHLIKYLIQSMRQD--HFVSDTGDVVYYQTDSLL 374
BLAST of EY659248 vs. ExPASy Swiss-Prot
Match: FAD3E_PHAAU (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Phaseolus aureus GN=ARG1 PE=2 SV=1) HSP 1 Score: 421.009 bits (1081), Expect = 4.557e-117 Identity = 191/288 (66.32%), Postives = 224/288 (77.78%), Query Frame = 2 Query: 2 WALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGWLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIESTEAARPVLGNXTVSQR-------NRXRYXLTFLGD*XKHG*RHYVSDMGDWCYYQTDHSL 844 WALFVLGHDCGHGSFSN KLNS VGH+LHS ILVPY+GWRISHRTHHQNHGHVE DESW PL+EK+Y+ LD TR LR+ PFP+ AYPFYLW+RSPGK GSHF+P S+LF P ERK V+TST+CW + ++L+ LS +GP+ +LKLYGVPY IFVMWLD VTYLHHHG+ KLPWYRG+EWSYLRG LTT+DRDYGW NN+HHDIGTHVIHHLFPQIPHYHL+E+T++A+ VLG + + +Y L + H+VSD GD YYQTD L Sbjct: 90 WALFVLGHDCGHGSFSNSSKLNSFVGHILHSLILVPYNGWRISHRTHHQNHGHVEKDESWVPLTEKVYKNLDDMTRMLRYSFPFPIFAYPFYLWNRSPGKEGSHFNPYSNLFSPGERKGVVTSTLCWGIVLSVLLYLSLTIGPIFMLKLYGVPYLIFVMWLDFVTYLHHHGYTHKLPWYRGQEWSYLRGGLTTVDRDYGWINNVHHDIGTHVIHHLFPQIPHYHLVEATKSAKSVLGKYYREPQKSGPLPFHLLKYLLQSISQ------DHFVSDTGDIVYYQTDPKL 371
BLAST of EY659248 vs. ExPASy Swiss-Prot
Match: FAD3E_BRANA (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Brassica napus GN=FAD3 PE=2 SV=1) HSP 1 Score: 418.313 bits (1074), Expect = 2.953e-116 Identity = 193/290 (66.55%), Postives = 225/290 (77.59%), Query Frame = 2 Query: 2 WALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGWLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIESTEAARPVLGNXTVSQRNRXRYXL----TFLGD*XKHG*RHYVSDMGDWCYYQTDHSLTLFQS 859 WA+FVLGHDCGHGSFS+ LNSVVGH+LHS ILVPYHGWRISHRTHHQNHGHVENDESW PL EK+Y+ L +TR LR+ +P P+LAYP YLW RSPGK GSHF+P S LF PSERK + TST CW+ M A LV LSF++ P+ +LK+YGVPY IFVMWLD VTYLHHHGH++KLPWYRGKEWSYLRG LTT+DRDYG FNNIHHDIGTHVIHHLFPQIPHYHL+++T AA+ VLG + + + + K HYVSD GD +Y+TD L ++ S Sbjct: 91 WAIFVLGHDCGHGSFSDIPLLNSVVGHILHSFILVPYHGWRISHRTHHQNHGHVENDESWVPLPEKLYKNLPHSTRMLRYTVPLPMLAYPIYLWYRSPGKEGSHFNPYSSLFAPSERKLIATSTTCWSIMLATLVYLSFLVDPVTVLKVYGVPYIIFVMWLDAVTYLHHHGHDEKLPWYRGKEWSYLRGGLTTIDRDYGIFNNIHHDIGTHVIHHLFPQIPHYHLVDATRAAKHVLGRYYREPKTSGAIPIHLVESLVASIKKD---HYVSDTGDIVFYETDPDLYVYAS 377
BLAST of EY659248 vs. ExPASy Swiss-Prot
Match: FAD3E_TOBAC (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Nicotiana tabacum GN=FAD3 PE=2 SV=1) HSP 1 Score: 416.001 bits (1068), Expect = 1.466e-115 Identity = 190/279 (68.10%), Postives = 222/279 (79.57%), Query Frame = 2 Query: 2 WALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGWLTTLDRDYGWFNNIHHDIGTHVIHHLFPQIPHYHLIESTEAARPVLGNXTVSQRNRXRYXLTFLGD*XKHG*R-HYVSDMGDWCYYQTD 835 WA+FVLGHDCGHGSFS+ LN+VVGH+LHS+ILVPYHGWRISH+THHQNHG+VE DESW P+ EK+Y + +T+FLR+KIPFPLLAYP YL RSPGK+GSHF+P SDLF P ERK V+TST+CWT MAALL+ L G +Q+ K+YG PY IFVMWLD VTYLHHHG+E KLPWYRGKEWSYLRG LTT+DRDYG FNNIHHDIGTHVIHHLFPQIPHYHL E+T+AA+PVLG + + D + + HYVSD G+ +YQTD Sbjct: 90 WAIFVLGHDCGHGSFSDSQLLNNVVGHILHSAILVPYHGWRISHKTHHQNHGNVETDESWVPMPEKLYNKVGYSTKFLRYKIPFPLLAYPMYLMKRSPGKSGSHFNPYSDLFQPHERKYVVTSTLCWTVMAALLLYLCTAFGSLQMFKIYGAPYLIFVMWLDFVTYLHHHGYEKKLPWYRGKEWSYLRGGLTTVDRDYGLFNNIHHDIGTHVIHHLFPQIPHYHLREATKAAKPVLGKYYREPKKSGPIPFHLVKDLTRSMKQDHYVSDSGEIVFYQTD 368 The following BLAST results are available for this feature:
BLAST of EY659248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659248 ID=EY659248; Name=EY659248; organism=Citrus sinensis; type=EST; length=903bpback to top |