EY659247

Overview
NameEY659247
Unique NameEY659247
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659247 vs. ExPASy Swiss-Prot
Match: CMTA2_ARATH (Calmodulin-binding transcription activator 2 OS=Arabidopsis thaliana GN=CMTA2 PE=1 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 4.071e-83
Identity = 164/265 (61.89%), Postives = 196/265 (73.96%), Query Frame = 3
Query:    3 DLSSSNGHKGISGFLAEXXXXXXXXXXKMNDSADDGALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEF--NNELGISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQAR*KYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHVPLKEDDYDFLKDGRXHX*ERXANALGRVKSMGQYP*ARAQYRRLLTRV 791
            DL+  NGH+GISGFLAE           + D+ ++ + + S AKAV TV+E+TATP +  D  + LS+KDSLTA+ NATQAADR+HQ+FRMQSFQRKQL+E   +N+  IS E A+S  AAK+ +     G  H+AA+QIQKK+RGWKKRKEFLLIRQRIVKIQAHVRGHQ R +YR IIWSVG+LEK+ILRWRRKGSGLRGF+RD +     P     +EDDYDFLK+GR    ER   AL RVKSM QYP ARAQYRRLLT V
Sbjct:  739 DLAYGNGHRGISGFLAESSLTSYLEKLTV-DAKENSSADSSGAKAVLTVAERTATPMSYGDVPETLSMKDSLTAVLNATQAADRLHQVFRMQSFQRKQLSELGGDNKFDISDELAVSFAAAKTKKSGHSSGAVHAAAVQIQKKYRGWKKRKEFLLIRQRIVKIQAHVRGHQVRKQYRAIIWSVGLLEKIILRWRRKGSGLRGFKRDTISKPTEPVCPAPQEDDYDFLKEGRKQTEERLQKALTRVKSMAQYPEARAQYRRLLTVV 1002          
BLAST of EY659247 vs. ExPASy Swiss-Prot
Match: CMTA1_ARATH (Calmodulin-binding transcription activator 1 OS=Arabidopsis thaliana GN=CMTA1 PE=2 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 2.826e-76
Identity = 158/273 (57.88%), Postives = 192/273 (70.33%), Query Frame = 3
Query:    3 DLSSSNGHKGISGFLAEXXXXXXXXXXKMNDSADDGALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEFNNE--LGISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQAR*KYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQ--------HVPLKEDDYDFLKDGRXHX*ERXANALGRVKSMGQYP*ARAQYRRLLTRV 791
            DL+ +NGH+GISGFLAE           + DS ++        KAVQTVSE+TA P    D  + LSLKDSLTA+ NATQAADR+HQ+FRMQSFQRKQL +  ++  + IS + A+S  A+K+  P QGD     AA  IQKK+RGWKKRKEFLLIRQRIVKIQAHVRGHQ R +YR +IWSVG+LEK+ILRWRRKG+GLRGF+R+A+     P+         +P +ED+YD+LK+GR    ER   AL RVKSM QYP AR QYRRLLT V
Sbjct:  690 DLAYANGHRGISGFLAESSLTSYLEKLTV-DSKENSPANSCGEKAVQTVSERTAAPMTYGDVPEKLSLKDSLTAVRNATQAADRLHQVFRMQSFQRKQLCDIGDDEKIDISDQLAVSFAASKTKNPGQGDVSLSCAATHIQKKYRGWKKRKEFLLIRQRIVKIQAHVRGHQVRKQYRTVIWSVGLLEKIILRWRRKGNGLRGFKRNAVAKTVEPEPPVSAICPRIP-QEDEYDYLKEGRKQTEERLQKALTRVKSMVQYPEARDQYRRLLTVV 960          
BLAST of EY659247 vs. ExPASy Swiss-Prot
Match: CMTA3_ARATH (Calmodulin-binding transcription activator 3 OS=Arabidopsis thaliana GN=CMTA3 PE=1 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 9.756e-61
Identity = 140/267 (52.43%), Postives = 174/267 (65.17%), Query Frame = 3
Query:    3 DLSSSNGHKGISGFLAEXXXXXXXXXXKMNDSADDGALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEFNNE-LGISYEHALSLVAAKSLRP--VQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQAR*KYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHVPLKEDDYDFLKDGRXHX*ERXANALGRVKSMGQYP*ARAQYRRLLTRVN 794
            DL+ +NGHKGI+G+L+E           +ND            K  +TV E   +P++        SL DSLTA+ NATQAA RIHQ+FR QSFQ+KQL EF ++ LG+S E ALS++A K+ +      D    +AAI+IQ KFRG+K RK++L+ RQRI+KIQAHVRG+Q R  YR IIWSVG+LEKVILRWRRKG+GLRGF+ +AL      Q    KE+D DF K GR    +R   AL RVKSM QYP AR QYRRLL  VN
Sbjct:  739 DLAYANGHKGIAGYLSEYALRAHVSLLSLND------------KNAETV-EMAPSPSSS-------SLTDSLTAVRNATQAAARIHQVFRAQSFQKKQLKEFGDKKLGMSEERALSMLAPKTHKSGRAHSDDSVQAAAIRIQNKFRGYKGRKDYLITRQRIIKIQAHVRGYQFRKNYRKIIWSVGVLEKVILRWRRKGAGLRGFKSEAL--VEKMQDGTEKEEDDDFFKQGRKQTEDRLQKALARVKSMVQYPEARDQYRRLLNVVN 983          
BLAST of EY659247 vs. ExPASy Swiss-Prot
Match: CMTA4_ARATH (Calmodulin-binding transcription activator 4 OS=Arabidopsis thaliana GN=CMTA4 PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.712e-39
Identity = 106/268 (39.55%), Postives = 152/268 (56.72%), Query Frame = 3
Query:    6 LSSSNGHKGISGFLAEXXXXXXXXXXKMNDSADD-GALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEFN-----NELGISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQAR*KYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHVPLKEDDYDFLKDGRXHX*ERXAN-ALGRVKSMGQYP*ARAQYRRLLTR 788
            +++SNGHKG++G+L+E           + ++ +     +    K + ++SE++  P+ + D+   +SLKD+L A+ NA QAA RI   FR  SF++++  E        E G+  E    + A   L   +G    +SAA+ IQK FRG+K RK FL +RQ++VKIQAHVRG+Q R  Y+ I W+V IL+KV+LRWRRKG GLRGFR+D      +        +D D LK  R    +   N A  RV SM   P AR QY R+L R
Sbjct:  726 IAASNGHKGLAGYLSEVALTNHLSSLTLEETENSKDTAQVQTEKTLNSISEQS--PSGNEDQ---VSLKDTLAAVRNAAQAAARIQAAFRAHSFRKRKQREAALVACLQEYGMYCEDIEGISAMSKLTFGKGRNY-NSAALSIQKNFRGYKDRKCFLELRQKVVKIQAHVRGYQIRKNYKVICWAVRILDKVVLRWRRKGVGLRGFRQDVESTEDS--------EDEDILKVFRKQKVDVAVNEAFSRVLSMSNSPEARQQYHRVLKR 979          
BLAST of EY659247 vs. ExPASy Swiss-Prot
Match: CMTA5_ARATH (Calmodulin-binding transcription activator 5 OS=Arabidopsis thaliana GN=CMTA5 PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 1.331e-25
Identity = 87/264 (32.95%), Postives = 135/264 (51.14%), Query Frame = 3
Query:    3 DLSSSNGHKGISGFLAEXXXXXXXXXXKMNDSADDGALEDSIAKAVQTV-SEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQ-RKQLTEFNNELGISYEHALSLVAAKSLRPVQGDGLAH---SAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQAR*KYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHVPLKEDDYDFLKDGRXHX*ERXANALGRVKSMGQYP*ARAQYRRL 779
            DL+   G+ G++ FLAE          +  D    G    +I+  ++T+ +EK++ P N N+E    SLKD+L A   A +AA RI   FR    + R     F ++     E A +++AA  ++    +       +AA +IQ +F+ WK R+EFL +R++ ++IQA  RG Q R +Y+ I WSVG+LEK ILRWR K  G RG +         P      E   DF K  +    ER   ++ +V++M +   A+  YRR+
Sbjct:  656 DLAQQKGYDGLAAFLAEKCLVA-----QFKDMQTAG----NISGNLETIKAEKSSNPGNANEEEQ--SLKDTLAAYRTAAEAAARIQGAFREHELKVRSSAVRFASK----EEEAKNIIAAMKIQHAFRNFEVRRKIAAAARIQYRFQTWKMRREFLNMRKKAIRIQAAFRGFQVRRQYQKITWSVGVLEKAILRWRLKRKGFRGLQVS------QPDEKEGSEAVEDFYKTSQKQAEERLERSVVKVQAMFRSKKAQQDYRRM 898          
BLAST of EY659247 vs. ExPASy Swiss-Prot
Match: CMTA6_ARATH (Calmodulin-binding transcription activator 6 OS=Arabidopsis thaliana GN=CMTA6 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.627e-25
Identity = 87/264 (32.95%), Postives = 136/264 (51.52%), Query Frame = 3
Query:    3 DLSSSNGHKGISGFLAEXXXXXXXXXXKMNDSADDGALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQ--RKQLTEFNNELGISYEHALSLVAAKSLRPV---QGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQAR*KYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHVPLKEDDYDFLKDGRXHX*ERXANALGRVKSMGQYP*ARAQYRRL 779
            DL+  NG+ G++ +LAE          K+  +   G LE   A   + +++ T          D  SLKD+L A   A +AA RI   FR ++ +  R  + +F N+     E A S++AA  ++             AA +IQ +F+ WK R+E+L +R++ ++IQA  RG QAR +Y+ I+WSVG+LEK +LRWR+K  G RG +  A   +P        E   DF K  +    ER   ++ RV++M +   A+  YRR+
Sbjct:  570 DLAQQNGYDGLAAYLAEKCLVAQFRDMKIAGNIT-GDLE---ACKAEMLNQGTLP-------EDEQSLKDALAAYRTAAEAAARIQGAFREKALKAARSSVIQFANK----EEEAKSIIAAMKIQNAFRKYDTRRKIEAAYRIQCRFQTWKIRREYLNMRRQAIRIQAAFRGLQARRQYKKILWSVGVLEKAVLRWRQKRKGFRGLQVAAEEDSPG-------EAQEDFYKTSQRQAEERLERSVVRVQAMFRSKKAQQDYRRM 811          
The following BLAST results are available for this feature:
BLAST of EY659247 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
CMTA2_ARATH4.071e-8361.89Calmodulin-binding transcription activator 2 OS=Ar... [more]
CMTA1_ARATH2.826e-7657.88Calmodulin-binding transcription activator 1 OS=Ar... [more]
CMTA3_ARATH9.756e-6152.43Calmodulin-binding transcription activator 3 OS=Ar... [more]
CMTA4_ARATH4.712e-3939.55Calmodulin-binding transcription activator 4 OS=Ar... [more]
CMTA5_ARATH1.331e-2532.95Calmodulin-binding transcription activator 5 OS=Ar... [more]
CMTA6_ARATH8.627e-2532.95Calmodulin-binding transcription activator 6 OS=Ar... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-A05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659247 ID=EY659247; Name=EY659247; organism=Citrus sinensis; type=EST; length=873bp
CAGACCTATCTTCTAGCAATGGACACAAAGGAATCTCGGGTTTTCTTGCG
GAGTCTTCGTTAACCAGCCTTCTGTTATCCCTTAAAATGAACGATTCAGC
AGACGATGGTGCCTTAGAAGATTCTATAGCTAAAGCTGTACAAACAGTTT
CAGAGAAGACAGCTACTCCTGCTAATGATAATGATGAGTCAGATGTACTA
TCACTGAAGGATTCATTAACTGCCATCTGTAATGCTACTCAAGCTGCTGA
CCGTATACATCAAATTTTCAGGATGCAATCATTCCAGCGGAAGCAGTTAA
CTGAGTTTAATAATGAATTAGGTATATCATATGAGCATGCTCTTTCACTT
GTGGCTGCTAAGTCACTCAGGCCTGTACAAGGTGATGGTCTAGCCCATTC
TGCCGCTATACAGATCCAGAAGAAGTTTCGTGGTTGGAAGAAGAGGAAAG
AATTCCTATTAATTAGGCAAAGGATTGTTAAAATTCAGGCACATGTGAGA
GGACATCAGGCAAGATAAAAATATAGGCCAATCATCTGGTCAGTTGGAAT
CCTGGAAAAGGTCATTTTGCGCTGGAGACGTAAAGGCAGCGGTTTGCGTG
GATTCCGACGTGATGCTCTCGGTATGAATCCTAATCCACAACATGTGCCA
TTGAAGGAAGACGATTATGATTTTTTAAAGGATGGGAGGNAACATNACTG
AGAAAGGGNTGCAAATGCACTTGGCAGAGTGAAGTCCATGGGTCAGTATC
CCTGAGCACGAGCTCAGTACCGTAGGTTGCTGACCCGTGTCAATGTTCCN
GTGATACCAGCAGGAGTNCAATATGGTCCAAATGGGCTTGGAGAATAGCT
GATGGAGACCTCGATCTGATTGA
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