EY659246

Overview
NameEY659246
Unique NameEY659246
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length937
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659246 vs. ExPASy Swiss-Prot
Match: DNJ11_ARATH (Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana GN=ATJ11 PE=1 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 2.616e-30
Identity = 76/145 (52.41%), Postives = 92/145 (63.45%), Query Frame = 1
Query:    4 PPLRVG-IHPPIXXXXXXXCSYTSAQNTTWTNSTVSNPPHHRMASCASLYEVLGIPMGATSQDIKTAYRRLARTLHPDVVAIEG-KDSTADEFIKIHAGYSTLSDPLKRAVYDQRLFQTRRRPLTA-VSGYSGYSGRNWETDQCW 429
            PP R   I PP+       CSYT  +++   +      P       ASLY+VL +P+GATSQDIK+AYRRLAR  HPDV   +    S+ADEF+KIHA Y TLSDP KR+VYD+R+ + R RPLT   SG   Y GRNWETDQCW
Sbjct:   25 PPSRTARISPPLVSAS---CSYTYTEDSPRLHQI----PRRLTTVPASLYDVLEVPLGATSQDIKSAYRRLARICHPDVAGTDRTSSSSADEFMKIHAAYCTLSDPEKRSVYDRRMLR-RSRPLTVGTSGLGSYVGRNWETDQCW 161          
BLAST of EY659246 vs. ExPASy Swiss-Prot
Match: DNAJ_ANATD (Chaperone protein dnaJ OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.719e-11
Identity = 39/92 (42.39%), Postives = 50/92 (54.35%), Query Frame = 1
Query:  127 MASCASLYEVLGIPMGATSQDIKTAYRRLARTLHPDVVAIEGKDSTADEFIKIHAGYSTLSDPLKRAVYDQRLFQTRRRPLTAVSGYSGYSG 402
            MA     YE+LG+P  AT ++IK AYRRLA+  HPD  A  G     ++F +I+  Y  LSDP KR +YDQ        P     G  G+SG
Sbjct:    1 MAQKKDYYEILGVPRNATEEEIKRAYRRLAKQYHPD--ANPGNKEAEEKFKEINEAYEVLSDPEKRKLYDQ-FGHAAFDPKYGAQGSGGFSG 89          
BLAST of EY659246 vs. ExPASy Swiss-Prot
Match: DNAJ2_SYNY3 (Chaperone protein dnaJ 2 OS=Synechocystis sp. (strain PCC 6803) GN=dnaJ2 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.912e-11
Identity = 39/95 (41.05%), Postives = 54/95 (56.84%), Query Frame = 1
Query:  127 MASCASLYEVLGIPMGATSQDIKTAYRRLARTLHPDVVAIEGKDSTADE-FIKIHAGYSTLSDPLKRAVYDQRLFQTRRRPLTAVSGYSGYSGRN 408
            M    + Y++LG+P  AT+++IK ++R+LAR  HPDV      D TA+E F  I+  Y  LSD  KR   D RLF   RRP T+    +   GR+
Sbjct:    1 MEQVRNYYQILGVPRNATAEEIKKSFRKLARQYHPDV---NPNDKTAEEKFKDINEAYDVLSDETKRRELDSRLFGRFRRPPTSRFSPNSNGGRS 92          
The following BLAST results are available for this feature:
BLAST of EY659246 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
DNJ11_ARATH2.616e-3052.41Chaperone protein dnaJ 11, chloroplastic OS=Arabid... [more]
DNAJ_ANATD2.719e-1142.39Chaperone protein dnaJ OS=Anaerocellum thermophilu... [more]
DNAJ2_SYNY37.912e-1141.05Chaperone protein dnaJ 2 OS=Synechocystis sp. (str... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-A04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659246 ID=EY659246; Name=EY659246; organism=Citrus sinensis; type=EST; length=937bp
CGGCCGCCGCTACGTGTCGGAATCCATCCACCAATCGCAGCAGCCGCTAC
AACAGCTTGTTCATACACATCAGCACAGAACACAACTTGGACTAATTCAA
CGGTGTCGAATCCTCCTCATCACCGGATGGCGTCGTGCGCTTCTCTGTAC
GAGGTTCTCGGTATACCGATGGGGGCCACCAGCCAGGATATCAAAACGGC
GTATCGGCGGCTGGCGAGGACTTTACATCCCGATGTCGTCGCGATTGAAG
GCAAGGACTCAACGGCCGACGAGTTCATTAAGATTCATGCTGGTTACAGC
ACCCTATCGGATCCTCTAAAACGCGCCGTTTATGATCAGAGACTCTTTCA
AACAAGAAGAAGACCGTTGACCGCCGTGTCCGGATATTCCGGGTATTCTG
GAAGGAATTGGGAGACTGATCAGTGCTGGTAGCGAGTTGACTTACTGTAC
TGCTTACGTCACCAGTAATCTTTCTAATTCTAGCCAGTAGTAGATCTGTA
TATTTATAAACACTAATATTTCAACACCTTCAATATATTACAGTATTATT
GGAGCACACGATGTGCAGTAGTGTTGTTTTTGTAATGATAATATTTTTGT
CGTGCNCGAAAATCAATTNTATTTCTACAAAAATAAAAAGGGGGGGGGGG
GCCCTCTTNCTNNCCCTTTTGTGTGCGCTTGGGTGTTGTCCTCCGCCCCC
GGGGTTCTGGTCGTGGTGCCTGGGGCGCCCCCGTCCGCTTGCGGCTCCCC
CTCGTCGTGTCGTCTTCGCGTGGGTGCTAGCCTTTATAGTAATGGGGCGG
CGCGCCTATTTGGGGCTCTACCTCATGTCGTCGCCGGCGCGCCTCGTCTC
TCCTTTCTGTATTTTCGCGTATTTCACTATCCGCTCGGCCGTTCTACACC
TCGGGGTGTGGAAATCTGGTTGTGGCCACTGAGTATA
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