EY659235

Overview
NameEY659235
Unique NameEY659235
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY659235 vs. ExPASy Swiss-Prot
Match: FB84_ARATH (F-box protein At1g70590 OS=Arabidopsis thaliana GN=At1g70590 PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 2.901e-63
Identity = 137/264 (51.89%), Postives = 172/264 (65.15%), Query Frame = 1 
Query:  118 MKQRTWPDRSTGSRFTAPQFPITEKDNRRPELTXXXXXXXXXXXXXFSCSRSIKS----TEGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGR-GVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDXKDAAISLYRQAAVLGDPA-----------AQPANAEEAVKSVYQASIAGPCRAQYQLALCLQ*SRGVDFNLQEAARWYLXAAEGA-MCVLCTHSLCYSLGKAATEXR 858
            MKQRTWP RS GSRF++  F      ++R  ++              S S S  S     E  DF+ LP+D+L KIAA F+ P L+AASLVCKSW DAL+PLRE+M+L+RWGK++KHGR GVR NLDKALDSFLKGA RGSTLAMVDAGL+YWE   K+ A++LYR+A+ LGD              QP+N +EA+K + Q++  G  RAQYQLALCL   R V  NL EA +WYL AAEG  +  +   SLCYS+G+   + R
Sbjct:    1 MKQRTWPCRSEGSRFSSLSFLKPHDKDKRSRISSINKATAKSTTSSRSSSSSSSSRPPSNEFGDFSMLPYDILMKIAAPFSHPNLQAASLVCKSWRDALKPLRESMLLIRWGKKYKHGRGGVRANLDKALDSFLKGAMRGSTLAMVDAGLVYWERGEKEKAVNLYRRASELGDAVGQCNLGIAYLQVQPSNPKEAMKWLKQSAENGYVRAQYQLALCLHHGRVVQTNLLEATKWYLKAAEGGYVRAMYNISLCYSVGEGLPQNR 264
The following BLAST results are available for this feature:
BLAST of EY659235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FB84_ARATH2.901e-6351.89F-box protein At1g70590 OS=Arabidopsis thaliana GN... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-004-H05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659235 ID=EY659235; Name=EY659235; organism=Citrus sinensis; type=EST; length=901bp
CGGAGAGTTGGTGCAGAAATTTCGCCACACGGGAATATTTCCCCACACGG
AATTAAGCACAAATACTGTACTTTTGACGACTACAGAATACAGACGGTTG
TTCACAGAAATGGGAAGATGAAGCAAAGAACATGGCCGGATCGATCGACC
GGCTCTCGGTTCACAGCTCCTCAATTCCCGATAACCGAGAAGGACAACCG
CCGGCCAGAACTCACCGCCAGTGCACGGAAGGCTAGAATCAAACGGCGCA
GCCGCTTCAGCTGCTCACGATCAATAAAATCAACGGAGGGTCATGATTTC
GCGAGCCTACCGTTCGATGTCTTGAACAAAATCGCAGCGTCATTCACGCT
GCCTCAACTGAGAGCGGCGTCGCTGGTGTGCAAGTCATGGAACGACGCGC
TTCGGCCGTTGAGAGAGGCGATGGTGTTACTAAGATGGGGGAAACGATTC
AAGCACGGCCGAGGCGTCCGCAAGAACTTGGATAAGGCTCTCGACTCGTT
CTTGAAAGGCGCGGCTCGCGGCTCCACGCTTGCTATGGTTGACGCCGGAC
TGATGTATTGGGAGATGGACANAAAGGATGCGGCTATTAGCTTGTATCGG
CAAGCCGCTGTGCTTGGAGATCCAGCTGCGCAACCTGCAAATGCAGAGGA
AGCTGTGAAAAGTGTGTATCAAGCATCGATTGCTGGGCCATGTCGAGCTC
AGTATCAACTTGCACTTTGCCTGCAATAGAGTCGAGGAGTGGATTTCAAT
CTTCAAGAAGCTGCTAGGTGGTATTTAANAGCTGCTGAAGGTGCTATGTG
CGTGCTATGTACACACTCTCTTTGCTATTCTTTGGGGAAGGCTGCCACTG
AGNACAGACANCGAGGAATGGATGAAAGAGCACTGATGGGGTACGGAAAG
C
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