EY659157
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659157 vs. ExPASy Swiss-Prot
Match: BRE1B_ARATH (E3 ubiquitin-protein ligase BRE1-like 2 OS=Arabidopsis thaliana GN=HUB2 PE=1 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 7.838e-52 Identity = 85/178 (47.75%), Postives = 121/178 (67.98%), Query Frame = 1 Query: 4 GVRAGGGSNVLQKLDSENQTRDSIPSGPPEDMFLCRLLQVNSIESSSKDGILQYVEEALASRHSSARELMKFIEEVIDAQRVKTKSIAEAFHEKLSAEDAIIQLSKIDDMMKEEAKNLHEVMEIIHLKHKEYADQIENYISSHSVDQAEIQHXXXXXXXXXXXXXXSRRKLVSLKMQK 537 GVRAG L LD ++ R +P ++ FLCRLLQV+S+++S D +++ VEEALA RHSS ELM E ID Q+ K +SI+++ H S EDA IQLS I+D+MKEE+KNL E+++ +H++HKE+++QI+ YISSHS DQ+E++H +RRKL++LKMQK Sbjct: 122 GVRAGANQEALNYLDIVDKKR--VPPCAADETFLCRLLQVDSLDTSKSDEVVRKVEEALALRHSSTMELMGLFENTIDTQKTKAESISQSLHAVKSTEDATIQLSSINDLMKEESKNLREMIDALHVRHKEHSEQIQAYISSHSTDQSELKHLKGQLEEIKAELEENRRKLITLKMQK 297 HSP 2 Score: 41.2022 bits (95), Expect = 7.838e-52 Identity = 29/62 (46.77%), Postives = 37/62 (59.68%), Query Frame = 3 Query: 525 KDAKDIASGTHSLVPAAAMVNGSVSPEKMPADGMMDLQELNDSVEEA*ILAADRLFEVERAQ 710 K KD A H PA A NGS+SPEK P D L+EL DS++E I+A RL E++ +Q Sbjct: 294 KMQKDAACEGHVTSPAIA--NGSLSPEK-PVD-KTKLRELKDSIDEIKIMAEGRLSELQASQ 351 HSP 3 Score: 35.8094 bits (81), Expect = 7.838e-52 Identity = 14/24 (58.33%), Postives = 21/24 (87.50%), Query Frame = 2 Query: 725 LSKQLENLQNELDDXQYVHSSRLY 796 LS+Q ++++NEL D QY++SSRLY Sbjct: 357 LSRQCQDIENELKDDQYIYSSRLY 380 HSP 4 Score: 21.1718 bits (43), Expect = 7.838e-52 Identity = 6/12 (50.00%), Postives = 9/12 (75.00%), Query Frame = 1 Query: 799 LVNDQLQHWMXE 834 L+ND++ HW E Sbjct: 382 LINDRIHHWNAE 393
BLAST of EY659157 vs. ExPASy Swiss-Prot
Match: BRE1B_ORYSJ (E3 ubiquitin-protein ligase BRE1-like 2 OS=Oryza sativa subsp. japonica GN=BRE1B PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 8.581e-34 Identity = 63/177 (35.59%), Postives = 103/177 (58.19%), Query Frame = 1 Query: 4 GVRAGGGSNVLQKLDSENQTRDSIPSGPPEDMFLCRLLQVNSIESSSKDGILQYVEEALASRHSSARELMKFIEEVIDAQRVKTKSIAEAFHEKLSAEDAIIQLSKIDDMMKEEAKNLHEVMEIIHLKHKEYADQIENYISSHSVDQAEIQHXXXXXXXXXXXXXXSRRKLVSLKMQ 534 GVRAGG N LQ LD E + +S+ S P E++FL RLL + ++ + + VEEALA R+S+ LMK ++E Q+ +++S++ A + + S+ED I+ L +D +KE NL + + II+ KH++Y D+IE + ++ S + E++ SRRKL L++Q Sbjct: 63 GVRAGGDLNGLQALDHEEMSEESLESCPSEEIFLFRLLNSRNFRNNDDSSLSKLVEEALALRYSTTVTLMKSLQEAFAVQQARSESLSLALNGQNSSEDVIVALENHNDYLKEVVDNLRQAVSIINRKHEKYLDEIEAFKNNQSRELHEVKCLSGELEESMAELEESRRKLAVLQLQ 239 HSP 2 Score: 41.9726 bits (97), Expect = 8.581e-34 Identity = 28/61 (45.90%), Postives = 38/61 (62.30%), Query Frame = 3 Query: 540 IASGTHSLVPAAAM--VNGSVSPEKMPADGMMDLQELNDSVEEA*ILAADRLFEVERAQXD 716 + +G SL+ +A VNGSVS +K GM ++L D+VEEA LAA+RLFE+ Q D Sbjct: 238 LQTGGGSLMNTSAPNGVNGSVSTDKSSDKGM-GWRDLKDAVEEAKTLAANRLFELHETQED 297 HSP 3 Score: 29.261 bits (64), Expect = 8.581e-34 Identity = 12/24 (50.00%), Postives = 19/24 (79.17%), Query Frame = 2 Query: 725 LSKQLENLQNELDDXQYVHSSRLY 796 LSKQLE++Q++L D Y+ +S+ Y Sbjct: 301 LSKQLEDIQDQLKDENYIVTSKPY 324
BLAST of EY659157 vs. ExPASy Swiss-Prot
Match: BRE1B_ORYSI (E3 ubiquitin-protein ligase BRE1-like 2 OS=Oryza sativa subsp. indica GN=BRE1B PE=3 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 8.581e-34 Identity = 63/177 (35.59%), Postives = 103/177 (58.19%), Query Frame = 1 Query: 4 GVRAGGGSNVLQKLDSENQTRDSIPSGPPEDMFLCRLLQVNSIESSSKDGILQYVEEALASRHSSARELMKFIEEVIDAQRVKTKSIAEAFHEKLSAEDAIIQLSKIDDMMKEEAKNLHEVMEIIHLKHKEYADQIENYISSHSVDQAEIQHXXXXXXXXXXXXXXSRRKLVSLKMQ 534 GVRAGG N LQ LD E + +S+ S P E++FL RLL + ++ + + VEEALA R+S+ LMK ++E Q+ +++S++ A + + S+ED I+ L +D +KE NL + + II+ KH++Y D+IE + ++ S + E++ SRRKL L++Q Sbjct: 63 GVRAGGDLNGLQALDHEEMSEESLESCPSEEIFLFRLLNSRNFRNNDDSSLSKLVEEALALRYSTTVTLMKSLQEAFAVQQARSESLSLALNGQNSSEDVIVALENHNDYLKEVVDNLRQAVSIINRKHEKYLDEIEAFKNNQSRELHEVKCLSGELEESMAELEESRRKLAVLQLQ 239 HSP 2 Score: 41.9726 bits (97), Expect = 8.581e-34 Identity = 28/61 (45.90%), Postives = 38/61 (62.30%), Query Frame = 3 Query: 540 IASGTHSLVPAAAM--VNGSVSPEKMPADGMMDLQELNDSVEEA*ILAADRLFEVERAQXD 716 + +G SL+ +A VNGSVS +K GM ++L D+VEEA LAA+RLFE+ Q D Sbjct: 238 LQTGGGSLMNTSAPNGVNGSVSTDKSSDKGM-GWRDLKDAVEEAKTLAANRLFELHETQED 297 HSP 3 Score: 29.261 bits (64), Expect = 8.581e-34 Identity = 12/24 (50.00%), Postives = 19/24 (79.17%), Query Frame = 2 Query: 725 LSKQLENLQNELDDXQYVHSSRLY 796 LSKQLE++Q++L D Y+ +S+ Y Sbjct: 301 LSKQLEDIQDQLKDENYIVTSKPY 324 The following BLAST results are available for this feature:
BLAST of EY659157 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659157 ID=EY659157; Name=EY659157; organism=Citrus sinensis; type=EST; length=942bpback to top |