EY659147

Overview
NameEY659147
Unique NameEY659147
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5338 contig Csv1_Contig5338:1..860. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY659147 vs. ExPASy Swiss-Prot
Match: NAC18_ARATH (NAC domain-containing protein 18 OS=Arabidopsis thaliana GN=NAC018 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.938e-12
Identity = 54/199 (27.14%), Postives = 85/199 (42.71%), Query Frame = 3 
Query:   87 PPTASTPIDVDFASTDENL-FGSLERMIRGSPLPCNVINDVNPYNHMPSNLP------DGVWYLVCSKE---------NTSAQHGQWRAKGETCEIFSN----SYIIGWRTTLEFFEGQVPNERKTDWVMQEFRITQKRL-----YGDKKEE---DSSSLCRVFLSGKQSPNHEMQQKLFSANINNETHSHSTELSFDK 599
            PP  + P    F  TDE L    L+R     PLP  +I DV+ Y   P  LP      +  WY    ++         N +A  G W+A G    + S     S  +G +  L F+ G+ P   K+DW+M E+R+T  +      +G+KK     D   LCR++     + +      L   +++N+ H H   +  D+
Sbjct:   12 PPQPNLPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPWELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGKPPKGVKSDWIMHEYRLTDNKPTHICDFGNKKNSLRLDDWVLCRIYKKNNSTASRH-HHHLHHIHLDNDHHRHDMMIDDDR 209
[Close]
BLAST of EY659147 vs. ExPASy Swiss-Prot
Match: NAC78_ARATH (NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.131e-11
Identity = 43/155 (27.74%), Postives = 71/155 (45.81%), Query Frame = 3 
Query:  120 FASTDENLFGS-LERMIRGSPLPCNVINDVNPYNHMPSNLPDGV--------WYLVC---------SKENTSAQHGQWRAKGETCEIFSNSYIIGWRTTLEFFEGQVPNERKTDWVMQEFRITQKRLYGDKKEEDSSSLCRVFLSGKQSPNHEMQ 530
            F  TDE L    L+R +   P   + I+  + Y   P +LPD          WY            SK N + + G W+  G+  EI + S ++G + TL + +G+ P   +T+WVM E+R++ + L      +++  LCR+F      P +  Q
Sbjct:   15 FHPTDEELVRYYLKRKVCNKPFKFDAISVTDIYKSEPWDLPDKSKLKSRDLEWYFFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRNGSRVVGMKKTLVYHKGRAPRGERTNWVMHEYRLSDEDLKKAGVPQEAYVLCRIFQKSGTGPKNGEQ 169
The following BLAST results are available for this feature:
BLAST of EY659147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
NAC18_ARATH4.938e-1227.14NAC domain-containing protein 18 OS=Arabidopsis th... [more]
NAC78_ARATH7.131e-1127.74NAC domain-containing protein 78 OS=Arabidopsis th... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-001-H07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659147 ID=EY659147; Name=EY659147; organism=Citrus sinensis; type=EST; length=877bp
CACGCGTCCGAGCAATCGCTTCGCTTGTGAGCTTCTGCTTCTCTCGAAGA
GCATCAATTCTCTCCTTGAATTGTCTCGTCATGTGTCCACCCACAGCTTC
CACTCCCATCGATGTTGATTTTGCTTCTACTGATGAGAATCTCTTTGGTT
CTTTGGAGAGAATGATCAGGGGATCTCCTCTTCCCTGCAATGTAATCAAT
GATGTCAATCCTTACAACCATATGCCCTCAAATTTACCTGATGGAGTTTG
GTACCTGGTGTGCTCTAAGGAGAACACAAGTGCACAGCATGGACAATGGA
GGGCTAAAGGGGAGACCTGCGAAATATTCTCAAATTCTTACATTATTGGT
TGGAGAACTACACTTGAATTTTTCGAAGGTCAAGTTCCGAATGAACGTAA
AACTGATTGGGTAATGCAAGAGTTCAGAATAACGCAGAAGAGATTGTATG
GGGACAAAAAGGAAGAGGATTCCAGCTCACTATGCAGAGTCTTTTTGAGT
GGTAAACAAAGCCCTAACCATGAAATGCAGCAGAAACTGTTTAGCGCCAA
TATTAACAATGAAACTCATAGTCATTCAACGGAATTAAGTTTTGACAAAG
ATAAGGATGATACAAGACAAGTTTCAATAATCAGACGTGAGGTGAGTAAT
GACGGTGAGAGTAGAACTTCGGCTGTCATGGAGAGACAACCNATCATGCC
GAGGACAACCTGCCTGAAGCTGATAATTTTTCTGAAGATGACTTCTTGGA
ATTACACGATCTTGATCAGCCATTATCACCTTNNCTCAGTTCTGACAATT
CAGTGGCATGACCTTGTCATCGGATGAATATTTGATCATTTAGCTTTGCT
GCAGAACTGGAACCTGNAAAAACAAGG
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