EY659099

Overview
NameEY659099
Unique NameEY659099
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length578
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3448 contig Csv1_Contig3448:1423..2000. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659099 vs. ExPASy Swiss-Prot
Match: ERG1_PANGI (Squalene monooxygenase OS=Panax ginseng PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.185e-48
Identity = 89/108 (82.41%), Postives = 101/108 (93.52%), Query Frame = 1
Query:   13 SSPDQARKEMRQACFDYLSLGGVFSTGPVALLSGLNPRPLSLVLHFFAVAIYGVGRLLLPFPSPKRMWIGARLISGASGIIFPIIKAEGVRQMFFPATIPAVYRAPPV 336
            +SPD+AR+EMR ACFDYLSLGG+ S GP+ALLSGLNPRP+SL LHFFAVAIYGVGRLL+PFPSPKRMW+GARLI GASGIIFPIIK+EG+RQMFFPA +PA YRAPP+
Sbjct:  431 ASPDKARQEMRNACFDYLSLGGICSQGPIALLSGLNPRPISLFLHFFAVAIYGVGRLLIPFPSPKRMWLGARLILGASGIIFPIIKSEGLRQMFFPAIVPAYYRAPPI 538          
BLAST of EY659099 vs. ExPASy Swiss-Prot
Match: ERG11_ARATH (Squalene monooxygenase 1,1 OS=Arabidopsis thaliana GN=SQP1,1 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 3.838e-23
Identity = 50/101 (49.50%), Postives = 68/101 (67.33%), Query Frame = 1
Query:   13 SSPDQARKEMRQACFDYLSLGGVFSTGPVALLSGLNPRPLSLVLHFFAVAIYGVGRLLLPFPSPKRMWIGARLISGASGIIFPIIKAEGVRQMFFPATIPA 315
            +S D+A++ MRQ C+DYLS GG  ++G +ALL G+NPRP+SL+ H  A+ +  +G LL PFPSP R+W   RL   A  ++ P +KAEGV QM FP    A
Sbjct:  405 ASTDEAKEAMRQGCYDYLSSGGFRTSGMMALLGGMNPRPISLIYHLCAITLSSIGHLLSPFPSPLRIWHSLRLFGLAMKMLVPHLKAEGVSQMLFPVNAAA 505          
BLAST of EY659099 vs. ExPASy Swiss-Prot
Match: ERG12_ARATH (Squalene monooxygenase 1,2 OS=Arabidopsis thaliana GN=SQP1,2 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.488e-22
Identity = 50/104 (48.08%), Postives = 70/104 (67.31%), Query Frame = 1
Query:   16 SPDQARKEMRQACFDYLSLGGVFSTGPVALLSGLNPRPLSLVLHFFAVAIYGVGRLLLPFPSPKRMWIGARLISGASGIIFPIIKAEGVRQMFFPATIPAVYRA 327
            S D+A++ MRQ  +DYL  GG  ++G +ALL G+NPRPLSLV H  A+ +  +G+LL PFPSP R+W   +L   A  ++ P +KAEGV QM FPA   A +++
Sbjct:  407 STDEAKEAMRQGVYDYLCSGGFRTSGMMALLGGMNPRPLSLVYHLCAITLSSIGQLLSPFPSPLRIWHSLKLFGLAMKMLVPNLKAEGVSQMLFPANAAAYHKS 510          
BLAST of EY659099 vs. ExPASy Swiss-Prot
Match: ERG12_BRANA (Squalene monooxygenase 1,2 OS=Brassica napus GN=SQP1,2 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.249e-22
Identity = 50/104 (48.08%), Postives = 72/104 (69.23%), Query Frame = 1
Query:   13 SSPDQARKEMRQACFDYLSLGGVFSTGPVALLSGLNPRPLSLVLHFFAVAIYGVGRLLLPFPSPKRMWIGARLISGASGIIFPIIKAEGVRQMFFPATIPAVYR 324
            +S D+A++ MRQ CFDYLS GG  ++G +AL+ G+NPRPLSL  H F +++  +G+LL PFP+P R+W   RL+  +  ++ P +KAEG+ QM  P T  A YR
Sbjct:  407 ASTDEAKEAMRQGCFDYLSSGGFRTSGLMALIGGMNPRPLSLFYHLFVISLSSIGQLLSPFPTPLRVWHSLRLLDLSLKMLVPHLKAEGIGQMLSP-TNAAAYR 509          
BLAST of EY659099 vs. ExPASy Swiss-Prot
Match: ERG11_BRANA (Squalene monooxygenase 1,1 OS=Brassica napus GN=SQP1,1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.669e-18
Identity = 49/104 (47.12%), Postives = 63/104 (60.58%), Query Frame = 1
Query:   13 SSPDQARKEMRQACFDYLSLGGVFSTGPVALLSGLNPRPLSLVLHFFAVAIYGVGRLLLPFPSPKRMWIGARLISGASGIIFPIIKAEGVRQMFFPATIPAVYR 324
            +S D+A++ MRQ CFDYLS GG  ++G +ALL G+NPRPLSL+ H   + +  +G+LL PFPSP  +W   RL             AEGV QM  PA   A YR
Sbjct:  406 ASTDEAKEAMRQGCFDYLSSGGFRTSGMMALLGGMNPRPLSLIFHLCGITLSSIGQLLSPFPSPLGIWHSLRLFG-----------AEGVSQMLSPA-YAAAYR 497          
BLAST of EY659099 vs. ExPASy Swiss-Prot
Match: ERG13_ARATH (Squalene monooxygenase 2 OS=Arabidopsis thaliana GN=SQP2 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.845e-17
Identity = 43/104 (41.35%), Postives = 66/104 (63.46%), Query Frame = 1
Query:   13 SSPDQARKEMRQACFDYLSLGGVFSTGPVALLSGLNPRPLSLVLHFFAVAIYGVGRLLLPFPSPKRMWIGARLISGASGIIFPIIKAEGVRQMFFPATIPAVYR 324
            ++ D+AR+ MRQ CF+YL+ G   + G + +L G+NP PL+LVLH  A+ +  +G LL PFPSP+R W   R+++ A  ++   +  EG ++M  P T  A YR
Sbjct:  405 ATTDEAREGMRQGCFNYLARGDFKTRGLMTILGGMNPHPLTLVLHLVAITLTSMGHLLSPFPSPRRFWHSLRILAWALQMLGAHLVDEGFKEMLIP-TNAAAYR 507          
BLAST of EY659099 vs. ExPASy Swiss-Prot
Match: ERG1_RAT (Squalene monooxygenase OS=Rattus norvegicus GN=Sqle PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.513e-11
Identity = 37/91 (40.66%), Postives = 54/91 (59.34%), Query Frame = 1
Query:   13 SSPDQARKEMRQACFDYLSLGGVFSTGPVALLSGLNPRPLSLVLHFFAVAIYGVGRLLLPFP---SPKRMWIGARLISGASGIIFPIIKAE 276
            S+ D + +++R+ACF Y  LGG   TGPV LLS L+P PL L+ HFF+VA+Y         P    P+ ++    ++  A  IIFP+I +E
Sbjct:  477 SATDDSLRQLRKACFLYFKLGGECLTGPVGLLSILSPDPLLLIRHFFSVAVYATYFCFKSEPWATKPRALFSSGAILYKACSIIFPLIYSE 567          
BLAST of EY659099 vs. ExPASy Swiss-Prot
Match: ERG1_HUMAN (Squalene monooxygenase OS=Homo sapiens GN=SQLE PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.513e-11
Identity = 38/91 (41.76%), Postives = 54/91 (59.34%), Query Frame = 1
Query:   13 SSPDQARKEMRQACFDYLSLGGVFSTGPVALLSGLNPRPLSLVLHFFAVAIYGVGRLLLPFP---SPKRMWIGARLISGASGIIFPIIKAE 276
            S+ D +  ++R+ACF Y  LGG    GPV LLS L+P PL+L+ HFFAVAIY V       P    P+ +   + ++  A  +IFP+I +E
Sbjct:  478 SATDDSLHQLRKACFLYFKLGGECVAGPVGLLSVLSPNPLALIGHFFAVAIYAVYFCFKSEPWITKPRALLSSSAVLYKACSVIFPLIYSE 568          
BLAST of EY659099 vs. ExPASy Swiss-Prot
Match: ERG1_MOUSE (Squalene monooxygenase OS=Mus musculus GN=Sqle PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.370e-11
Identity = 37/91 (40.66%), Postives = 53/91 (58.24%), Query Frame = 1
Query:   13 SSPDQARKEMRQACFDYLSLGGVFSTGPVALLSGLNPRPLSLVLHFFAVAIYGVGRLLLPFP---SPKRMWIGARLISGASGIIFPIIKAE 276
            S+ D +  ++R+ACF Y  LGG   TGPV LLS L+P PL L+ HFF+VAIY         P    P+ ++    ++  A  I+FP+I +E
Sbjct:  476 SATDDSLHQLRKACFLYFKLGGECVTGPVGLLSILSPHPLVLIRHFFSVAIYATYFCFKSEPWATKPRALFSSGAVLYKACSILFPLIYSE 566          
The following BLAST results are available for this feature:
BLAST of EY659099 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
ERG1_PANGI1.185e-4882.41Squalene monooxygenase OS=Panax ginseng PE=2 SV=1[more]
ERG11_ARATH3.838e-2349.50Squalene monooxygenase 1,1 OS=Arabidopsis thaliana... [more]
ERG12_ARATH2.488e-2248.08Squalene monooxygenase 1,2 OS=Arabidopsis thaliana... [more]
ERG12_BRANA3.249e-2248.08Squalene monooxygenase 1,2 OS=Brassica napus GN=SQ... [more]
ERG11_BRANA1.669e-1847.12Squalene monooxygenase 1,1 OS=Brassica napus GN=SQ... [more]
ERG13_ARATH1.845e-1741.35Squalene monooxygenase 2 OS=Arabidopsis thaliana G... [more]
ERG1_RAT1.513e-1140.66Squalene monooxygenase OS=Rattus norvegicus GN=Sql... [more]
ERG1_HUMAN1.513e-1141.76Squalene monooxygenase OS=Homo sapiens GN=SQLE PE=... [more]
ERG1_MOUSE3.370e-1140.66Squalene monooxygenase OS=Mus musculus GN=Sqle PE=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-001-D06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659099 ID=EY659099; Name=EY659099; organism=Citrus sinensis; type=EST; length=578bp
CCACGCGTCCGCTCTTCTCCTGATCAAGCAAGGAAGGAAATGCGCCAAGC
ATGTTTCGATTATTTAAGCCTTGGAGGTGTCTTTTCAACTGGACCAGTTG
CTCTACTTTCTGGTCTAAACCCTCGCCCCTTGAGTTTAGTTCTCCATTTC
TTTGCTGTGGCAATATATGGTGTCGGTCGTTTGCTACTGCCGTTTCCTTC
ACCTAAGCGCATGTGGATTGGAGCTAGGTTAATTTCGGGTGCATCAGGTA
TCATTTTCCCCATCATTAAGGCCGAAGGAGTGAGGCAAATGTTCTTCCCT
GCCACCATACCTGCTGTCTACAGAGCCCCTCCTGTTGAGGATTGACGGAC
CAAACAAAAATCAATGTAGCTGAGGCTTTGTTGCTAATAAGGCCGTGCTT
CTTGTATCTGAACCTCCATCAACCTTAAGGACATATTATATGCAAACTGC
CTTTGTTAAAAAGGGCAAAAAGATAGAAAACAGAAGAACGTGGACATTAT
ATAATTATTTGTGGTTTCGAGGATGCATAAAATCATACAAACAATCCCAT
AATTGTATTGTATGATGCTTTATTATCT
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