EY659094

Overview
NameEY659094
Unique NameEY659094
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length803
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659094_ssr62 microsatellite EY659094_ssr62:62..73. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY659094 vs. ExPASy Swiss-Prot
Match: Y3550_ARATH (REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana GN=At3g05500 PE=2 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 3.568e-79
Identity = 134/189 (70.90%), Postives = 161/189 (85.19%), Query Frame = 2
Query:  107 NMDIEEEQRLKYLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASXMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFPSVAQKCVPTAAYXSEKYN 673
            +M  EE++RLKYL+FVQ A +  LL F  +Y  AK KSGPLKPGVESVEG VK VVGPVY+KYH +P+E+LK++D+KVD SVT+LD RVPPV+KQV AQA+SAAQ+AP+VAR++ASEV+ AGV  TAS MAKSVY+KYEPAAKELY+ YEPKAEQ AVSAW+KLNQ+PLFP +AQ  VPTAA+ SEKYN
Sbjct:   13 DMTKEEKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESVEGAVKTVVGPVYEKYHDVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAPIVARALASEVRRAGVVETASGMAKSVYSKYEPAAKELYANYEPKAEQCAVSAWKKLNQLPLFPRLAQVAVPTAAFCSEKYN 201          

HSP 2 Score: 47.3654 bits (111), Expect = 3.568e-79
Identity = 20/32 (62.50%), Postives = 26/32 (81.25%), Query Frame = 1
Query:  664 KIQQTVVSAANKGYKVSSYLPLXPTEKIAKVF 759
            K   TVV AA KGY+V+SY+PL PTE+I+K+F
Sbjct:  199 KYNDTVVKAAEKGYRVTSYMPLVPTERISKIF 230          
BLAST of EY659094 vs. ExPASy Swiss-Prot
Match: SRP_VITRI (Stress-related protein OS=Vitis riparia GN=SRP PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.119e-68
Identity = 116/185 (62.70%), Postives = 148/185 (80.00%), Query Frame = 2
Query:  122 EEQRLKYLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASXMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFPSVAQKCVPTAAYXSEKYNK 676
            EE+RLKYL+FVQVA I+V++CF +LY YAK  SGPLKPGV++VEGTVK V+GPVY+K++ +P ELL F+DRKV+ S+ +L+  VP ++K+   QA++ AQ AP +A +VASEV+  GV  TA  + K+VY+K EP AKEL SKYEP AEQYAVSAWR LN++PLFP VAQ  VPTAAY SEKYN+
Sbjct:   16 EEKRLKYLDFVQVAAIYVIVCFSSLYEYAKENSGPLKPGVQTVEGTVKTVIGPVYEKFYDVPFELLMFVDRKVEASIYELERHVPSLVKRASCQAITVAQKAPELALAVASEVQRPGVVDTAKNITKNVYSKCEPTAKELCSKYEPVAEQYAVSAWRSLNRLPLFPQVAQVVVPTAAYWSEKYNQ 200          

HSP 2 Score: 42.743 bits (99), Expect = 1.119e-68
Identity = 20/35 (57.14%), Postives = 24/35 (68.57%), Query Frame = 1
Query:  664 KIQQTVVSAANKGYKVSSYLPLXPTEKIAKVFNTG 768
            K  Q+V   A +GY V+ YLPL PTE+IAKVF  G
Sbjct:  197 KYNQSVSYTAERGYTVALYLPLIPTERIAKVFQDG 231          
BLAST of EY659094 vs. ExPASy Swiss-Prot
Match: Y5513_ORYSJ (REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonica GN=Os05g0151300 PE=2 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 2.336e-50
Identity = 103/200 (51.50%), Postives = 140/200 (70.00%), Query Frame = 2
Query:   83 EKNVPSQQNMDIE---EEQRLKYLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASXMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFPSVAQKCVPTAAYXSEKYN 673
            E+ V  ++  ++E   EE+RL+YLEFVQ A   VL+     Y YAK  +GPL+PGV+ VEGTVK VVGPVYD++HG+P++LLKF+DRKV ESV +LD RVPPV+K+           AP +ARS A+EV+ AG+ GTA+ +AKS   + EP A++LY++YEP AE+ A  AW  LN++PL PSV +  +P AA  S +YN
Sbjct:   15 EEEVTVEKTPEMEAAAEEERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPVYDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVKE-----------APGLARSAAAEVRQAGLVGTATGLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARYN 203          
BLAST of EY659094 vs. ExPASy Swiss-Prot
Match: Y5513_ORYSI (REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica GN=OsI_017815 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.336e-50
Identity = 103/200 (51.50%), Postives = 140/200 (70.00%), Query Frame = 2
Query:   83 EKNVPSQQNMDIE---EEQRLKYLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASXMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFPSVAQKCVPTAAYXSEKYN 673
            E+ V  ++  ++E   EE+RL+YLEFVQ A   VL+     Y YAK  +GPL+PGV+ VEGTVK VVGPVYD++HG+P++LLKF+DRKV ESV +LD RVPPV+K+           AP +ARS A+EV+ AG+ GTA+ +AKS   + EP A++LY++YEP AE+ A  AW  LN++PL PSV +  +P AA  S +YN
Sbjct:   15 EEEVTVEKTPEMEAAAEEERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPVYDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVKE-----------APGLARSAAAEVRQAGLVGTATGLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARYN 203          
BLAST of EY659094 vs. ExPASy Swiss-Prot
Match: SRPP_HEVBR (Small rubber particle protein OS=Hevea brasiliensis GN=SRPP PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.058e-42
Identity = 96/184 (52.17%), Postives = 116/184 (63.04%), Query Frame = 2
Query:  122 EEQRLKYLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASXMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFPSVAQKCVPTAAYXSEKYN 673
            EE+RLKYL+FV+ A ++ +  F  LY YAK  SGPLKPGV+++E  VK VV PVY     +P+E +KF+D+ VD SVT LD  VPPV+KQV AQ  S AQ AP +   VAS V   GV               +  AK LY+  EPKAEQYAV  WR LN++PL P VA   VPTA Y SEKYN
Sbjct:    6 EEERLKYLDFVRAAGVYAVDSFSTLYLYAKDISGPLKPGVDTIENVVKTVVTPVYY----IPLEAVKFVDKTVDVSVTSLDGVVPPVIKQVSAQTYSVAQDAPRIVLDVASSVFNTGV---------------QEGAKALYANLEPKAEQYAVITWRALNKLPLVPQVANVVVPTAVYFSEKYN 170          
BLAST of EY659094 vs. ExPASy Swiss-Prot
Match: Y2778_ARATH (REF/SRPP-like protein At2g47780 OS=Arabidopsis thaliana GN=At2g47780 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.512e-39
Identity = 84/185 (45.41%), Postives = 116/185 (62.70%), Query Frame = 2
Query:  119 EEEQRLKYLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASXMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFPSVAQKCVPTAAYXSEKYN 673
            ++E +LK+LEF+QVA ++   CF  LY  AK  +GPLK GVE++E  V+ V+ P+Y+K+H +P +LL F+DRKVD+    ++  VP ++KQ  +QAL           +VA+EV+  GV  T   +A+SV  KYEPA           AE YA + WR LNQ+PLFP VA   +PTA Y SEKYN
Sbjct:   36 DDEMKLKHLEFIQVAAVYFAACFSTLYELAKDNAGPLKLGVENIEDCVRTVLAPLYEKFHDVPFKLLLFVDRKVDDVFFDVETYVPSLVKQASSQAL-----------TVATEVQRTGVVDTTKSIARSVRDKYEPA-----------AEYYAATLWRLLNQLPLFPEVAHLVIPTAFYWSEKYN 198          

HSP 2 Score: 23.483 bits (49), Expect = 1.512e-39
Identity = 10/31 (32.26%), Postives = 16/31 (51.61%), Query Frame = 1
Query:  664 KIQQTVVSAANKGYKVSSYLPLXPTEKIAKV 756
            K    V    ++ Y  + YLP+ P EKI+ +
Sbjct:  196 KYNDAVRYVGDRDYFGAEYLPMIPIEKISDI 226          
BLAST of EY659094 vs. ExPASy Swiss-Prot
Match: SRP_PHAVU (Stress-related protein OS=Phaseolus vulgaris GN=SRP PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 8.067e-35
Identity = 84/161 (52.17%), Postives = 102/161 (63.35%), Query Frame = 2
Query:  194 LYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASXMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFPSVAQKCVPTAAYXSEKYNK 676
            LY YAK ++GPLKPGV +VE  VK VV PVYD++H +P+ELLK+ DRKV E    LD  VP  +K+V +QA           RSV SEV+  GV+                 AK +YSKYEP AEQ AVSAWRKLNQ+PLFP VA   +P AAY +EKYN+
Sbjct:    6 LYSYAKERAGPLKPGVNTVEDAVKTVVAPVYDRFHLVPVELLKYADRKVGE----LDRHVPSNVKKVSSQA-----------RSVVSEVRRDGVS---------------TFAKTVYSKYEPTAEQCAVSAWRKLNQLPLFPQVANAVLPKAAYCTEKYNE 136          
BLAST of EY659094 vs. ExPASy Swiss-Prot
Match: Y1736_ARATH (REF/SRPP-like protein At1g67360 OS=Arabidopsis thaliana GN=At1g67360 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.973e-28
Identity = 71/184 (38.59%), Postives = 93/184 (50.54%), Query Frame = 2
Query:  122 EEQRLKYLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASXMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFPSVAQKCVPTAAYXSEKYN 673
            +E  LK+L FV++ATIH+L    NLY YAK  SGPLK  VE VEG V  VV PVY K+  +P  LL F+D KV E   K D   PP+ K+V  QA      A   A+S   E +T G     +  A               ++Y+      +V  W KLNQ     ++  K +P AA+ S +YN
Sbjct:    9 KEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVTPVYQKFKDVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTGGPKAAFNYAA---------------TEYKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHFSSRYN 177          

HSP 2 Score: 28.1054 bits (61), Expect = 9.973e-28
Identity = 11/27 (40.74%), Postives = 14/27 (51.85%), Query Frame = 1
Query:  679 VVSAANKGYKVSSYLPLXPTEKIAKVF 759
            V    N GY +  YLPL P + I K +
Sbjct:  180 VTDMTNMGYSLVGYLPLVPVDDIVKAY 206          
BLAST of EY659094 vs. ExPASy Swiss-Prot
Match: REF_HEVBR (Rubber elongation factor protein OS=Hevea brasiliensis PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.023e-21
Identity = 61/146 (41.78%), Postives = 89/146 (60.96%), Query Frame = 2
Query:   74 MAEEKNVPSQQNMDIEEEQRLKYLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASXMAKSVY 511
            MAE+++  +QQ     + + LKYL FVQ A  + +  F N+Y +AK KSGPL+PGV+ +EG VKNV  P+Y+++  +P   LKF+D  V  SVT +D  +PP++K    Q +SA + AP  ARS+AS      + G    +AK  Y
Sbjct:    1 MAEDED--NQQG----QGEGLKYLGFVQDAATYAVTTFSNVYLFAKDKSGPLQPGVDIIEGPVKNVAVPLYNRFSYIPNGALKFVDSTVVASVTIIDRSLPPIVKDASIQVVSAIRAAPEAARSLAS-----SLPGQTKILAKVFY 135          
The following BLAST results are available for this feature:
BLAST of EY659094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
Y3550_ARATH3.568e-7970.90REF/SRPP-like protein At3g05500 OS=Arabidopsis tha... [more]
SRP_VITRI1.119e-6862.70Stress-related protein OS=Vitis riparia GN=SRP PE=... [more]
Y5513_ORYSJ2.336e-5051.50REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 ... [more]
Y5513_ORYSI2.336e-5051.50REF/SRPP-like protein OsI_017815 OS=Oryza sativa s... [more]
SRPP_HEVBR3.058e-4252.17Small rubber particle protein OS=Hevea brasiliensi... [more]
Y2778_ARATH1.512e-3945.41REF/SRPP-like protein At2g47780 OS=Arabidopsis tha... [more]
SRP_PHAVU8.067e-3552.17Stress-related protein OS=Phaseolus vulgaris GN=SR... [more]
Y1736_ARATH9.973e-2838.59REF/SRPP-like protein At1g67360 OS=Arabidopsis tha... [more]
REF_HEVBR1.023e-2141.78Rubber elongation factor protein OS=Hevea brasilie... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-001-D01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659094 ID=EY659094; Name=EY659094; organism=Citrus sinensis; type=EST; length=803bp
CCACGCGTCCGCGAACAAGTTAAAGGCTTCTTCTACGACGTCGTTTCACA
GTCATTCGTCAATCATCATCATCATGGCCGAAGAGAAGAACGTGCCGTCC
CAACAAAACATGGATATTGAGGAGGAGCAGAGGCTGAAATATTTGGAGTT
TGTGCAAGTTGCCACAATCCATGTGTTGCTGTGCTTCCATAATCTATATG
GTTATGCTAAAGCCAAGTCCGGACCATTGAAACCTGGTGTGGAGTCCGTT
GAGGGGACTGTCAAGAATGTGGTTGGACCTGTTTATGATAAGTATCATGG
TCTCCCGATTGAGCTCCTTAAGTTTATTGATCGCAAGGTGGATGAGTCTG
TGACCAAGCTGGACTGCCGTGTGCCTCCAGTCCTCAAGCAAGTCCCTGCC
CAAGCTCTCTCCGCTGCTCAAATGGCTCCCGTAGTGGCACGATCCGTGGC
TTCTGAAGTGAAGACTGCCGGTGTAGCCGGCACTGCCTCANGAATGGCAA
AATCCGTTTACACCAAGTACGAGCCAGCAGCCAAGGAACTTTACTCCAAG
TACGAACCAAAAGCGGAGCAATATGCTGTGTCAGCTTGGCGCAAGCTCAA
TCAGATGCCACTATTCCCCTCAGTAGCTCAAAAGTGTGTGCCAACTGCTG
CCTATTGNTCCGAAAAATACAACAAACAGTGGTGAGCGCTGCAAATAAGG
GGTACAAGGTCTCCTCATATTTGCCTTTGNTCCCTACTGAAAAGATTGCT
AAGGTGTTCAACACGGGGTTGTTGAATCGCAGCCTCTGGCTCCTGCTGGA
CAT
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