EY676435

Overview
NameEY676435
Unique NameEY676435
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY676435 vs. ExPASy Swiss-Prot
Match: DHGY_CUCSA (Glycerate dehydrogenase OS=Cucumis sativus GN=HPR-A PE=2 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.358e-70
Identity = 148/224 (66.07%), Postives = 162/224 (72.32%), Query Frame = 3
Query:   60 MAKPVSIEVWNPNGKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLFXXXXXXXXXXXXVL*ELGLYNGMASQIYSSGTGSRDKLSVWIWTWVYRI-RPYAKMMGEGGQNGTSFIFDLFQATPLGKFCPKL*GHFPKTQG 728
            MAKPV IEVWNPNGKYRVVSTKPMPGTRWINLLIEQDCRVEICT+KKTILSVEDI+ALIGDKCDGVIGQLTEDWGE LF+ALSRAGGKAFSNMAVGYNNVDVNAANKYG+AVGNTPGVLTETTAELAASL              +   G Y+G    ++         + V       RI   YA+MM EG +    + FDL+Q+T L KF     G F K  G
Sbjct:    1 MAKPVQIEVWNPNGKYRVVSTKPMPGTRWINLLIEQDCRVEICTEKKTILSVEDILALIGDKCDGVIGQLTEDWGEVLFSALSRAGGKAFSNMAVGYNNVDVNAANKYGVAVGNTPGVLTETTAELAASLSLAAARRIVEADEFM-RAGRYDGWLPNLFVGNLLKGQTVGV---IGAGRIGSAYARMMVEGFKMNLIY-FDLYQSTRLEKFVTAY-GEFLKANG 218          
The following BLAST results are available for this feature:
BLAST of EY676435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DHGY_CUCSA1.358e-7066.07Glycerate dehydrogenase OS=Cucumis sativus GN=HPR-... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-022-F05-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY676435 ID=EY676435; Name=EY676435; organism=Citrus sinensis; type=EST; length=873bp
TTTCAAAGCACACGCTCTGTTTTTGGCACTTGGAACTTGAAACTGCCAAC
TTAGCTTCAATGGCGAAGCCAGTTTCAATTGAAGTGTGGAACCCAAATGG
AAAATATAGAGTTGTTAGTACCAAGCCTATGCCTGGAACCCGCTGGATCA
ATCTCTTAATCGAACAAGATTGCCGTGTTGAAATATGTACCCAGAAGAAA
ACTATACTCTCTGTTGAAGATATCATTGCTTTGATTGGTGACAAGTGCGA
TGGAGTCATTGGACAGTTGACAGAGGACTGGGGAGAGACTTTGTTTGCTG
CACTGAGTAGAGCAGGAGGAAAGGCTTTTAGTAACATGGCTGTTGGTTAC
AACAATGTTGACGTTAATGCTGCTAACAAATATGGTATTGCTGTTGGAAA
CACTCCTGGAGTACTTACTGAAACAACAGCAGAGTTAGCAGCTTCGCTCT
TCTCTAGCGGCTGCAAAAAAAATTGTTGAAGCAAATGAGTTTTATGAGAG
CTGGGCTTATACAATGGGATGGCTTCCCAAATCTATTCCTCGGGAACTGG
CTCAAGGGACAAACTGTCGGTGTGGATTTGGACCTGGGTCTATCGGATCC
GGCCCTATGCTAAAATGATGGGTGAAGGGGGTCAAAATGGAACCTCTTTT
ATCTTTGATCTTTTCCAAGCTACCCCCCTGGGAAAATTTTGTCCCAAACT
TTAGGGTCATTTTCCAAAAACCCAAGGGGTGAAAAAACCCTGGCCCTTTG
AAAAAAAACCCCCCCCATGGAAAAAGGGGGGCTTCCAAAAAAAAAAATTG
GAAAAATTCTTCCCCCACCTTCTGGGGAAAAAACCCCGATACCCTTTTTT
TTAAAAAAAAAAAAGGGGTTTGC
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