EY659084
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659084 vs. ExPASy Swiss-Prot
Match: RR1_SPIOL (30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea GN=RPS1 PE=1 SV=1) HSP 1 Score: 266.929 bits (681), Expect = 1.155e-70 Identity = 134/189 (70.90%), Postives = 161/189 (85.19%), Query Frame = 2 Query: 59 MATLAQQFTG-LRCPPISHTRLSRRKSITQIQQKLLNSRKNKTIVSAVAISNAETREREELNQLFEEAYERCRTAPMEGVSFTLEEFHSALEKYDFNSELGTKVKGTVFCTDNRGALVDITAKSSAYLPTQEACIHKIKHVEEAGIVPGLKEEFVIIGENEADDSLVLSLRMIQYELAWERCXQLQSED 622 MA+LAQQ G LRCPP+S++ LS+ S K + IVSAVA+SNA+TRER++L QLFE+AYERCR APMEGVSFT+++FH+AL+KYDFNSE+G++VKGTVFCTD GALVDITAKSSAYLP EACI++IK+VEEAGI+PG++EEFVIIGENEADDSL+LSLR IQYELAWERC QLQ+ED Sbjct: 1 MASLAQQLAGGLRCPPLSNSNLSKPFS-----PKHTLKPRFSPIVSAVAVSNAQTRERQKLKQLFEDAYERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALVDITAKSSAYLPLAEACIYRIKNVEEAGIIPGVREEFVIIGENEADDSLILSLRQIQYELAWERCRQLQAED 184
BLAST of EY659084 vs. ExPASy Swiss-Prot
Match: RS1A_SYNY3 (30S ribosomal protein S1 homolog A OS=Synechocystis sp. (strain PCC 6803) GN=rps1A PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.096e-20 Identity = 51/110 (46.36%), Postives = 72/110 (65.45%), Query Frame = 2 Query: 293 VSFTLEEFHSALEKYDFNSELGTKVKGTVFCTDNRGALVDITAKSSAYLPTQEACIHKIKHVEEAGIVPGLKEEFVIIGENEADDSLVLSLRMIQYELAWERCXQLQSED 622 + FTLE+F + L+KYD++ G V GTVF ++RGAL+DI AK++AY+P QE I+++ EE + P EF I+ + D L LS+R I+Y AWER QLQ+ED Sbjct: 10 IGFTLEDFAALLDKYDYHFSPGDIVAGTVFSMESRGALIDIGAKTAAYIPIQEMSINRVDDPEEV-LQPNETREFFILTDENEDGQLTLSIRRIEYMRAWERVRQLQAED 118
BLAST of EY659084 vs. ExPASy Swiss-Prot
Match: RS1_SYNP6 (30S ribosomal protein S1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rpsA PE=1 SV=4) HSP 1 Score: 97.4413 bits (241), Expect = 1.212e-19 Identity = 50/114 (43.86%), Postives = 72/114 (63.16%), Query Frame = 2 Query: 281 PMEGVSFTLEEFHSALEKYDFNSELGTKVKGTVFCTDNRGALVDITAKSSAYLPTQEACIHKIKHVEEAGIVPGLKEEFVIIGENEADDSLVLSLRMIQYELAWERCXQLQSED 622 P + FT E+F + L++YD++ G V GTVF + RGAL+DI AK++A+LP QE I++++ EE + P EF I+ + D L LS+R I+Y AWER QLQ+ED Sbjct: 7 PAVDIGFTHEDFAALLDQYDYHFNPGDTVVGTVFNLEPRGALIDIGAKTAAFLPVQEMSINRVESPEEV-LQPSEMREFFILSDENEDGQLTLSIRRIEYMRAWERVRQLQTED 119
BLAST of EY659084 vs. ExPASy Swiss-Prot
Match: RR1_PORPU (30S ribosomal protein S1, chloroplastic OS=Porphyra purpurea GN=rps1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.027e-11 Identity = 41/110 (37.27%), Postives = 59/110 (53.64%), Query Frame = 2 Query: 296 SFTLEEFHSALEKYDFNSELGTKVKGTVFCTDNRGALVDITAKSSAYLPTQEACIH-KIKHVEEAGIVPGLKEEFVIIGENEADDSLVLSLRMIQYELAWERCXQLQSED 622 SFT F + L+KY ++ LG V GT+F + G LVDI SAYLP QE + ++ + I EF ++ N L+LS+R ++Y AW+R QL +ED Sbjct: 7 SFTHRNFAAVLQKYKYDLNLGDIVAGTIFSFELNGVLVDIGTPVSAYLPIQEVSSNQELNNFNSLNI--NDTREFFLLDYNVESRQLILSIRRLEYIRAWKRIRQLLAED 114 The following BLAST results are available for this feature:
BLAST of EY659084 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659084 ID=EY659084; Name=EY659084; organism=Citrus sinensis; type=EST; length=936bpback to top |