EY658310

Overview
NameEY658310
Unique NameEY658310
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1034
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY658310 vs. ExPASy Swiss-Prot
Match: GRIP_ARATH (Protein GRIP OS=Arabidopsis thaliana GN=GRIP PE=1 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 5.090e-44
Identity = 85/134 (63.43%), Postives = 108/134 (80.60%), Query Frame = 3 
Query:   24 VKELRERIXXXXXXXXXXXXTRGAAEKALEHLRVQYEEADAKAQEFSAKLAEAQQKLGQEIKGHEDKYTELDSKFTRLHKRAKQRIQEVQKEKDDLETRLRDVGETAERASSQCSALQQELERTRQQANDALKS 425
            +K+L+E++            TR AAE+ALEHLR  Y EADAK+QE+S+K ++ +QKL QEIK  ++KY +LD+KFTRLHKRAKQRIQE+QKEKDDL+ R R+V ETAERASSQ S++QQELERTRQQAN+ALK+
Sbjct:   84 LKQLQEQVASLSREIDVEKQTRVAAEQALEHLREAYSEADAKSQEYSSKFSQVEQKLDQEIKERDEKYADLDAKFTRLHKRAKQRIQEIQKEKDDLDARFREVNETAERASSQHSSMQQELERTRQQANEALKA 217

HSP 2 Score: 29.6462 bits (65), Expect = 5.090e-44
Identity = 18/33 (54.55%), Postives = 19/33 (57.58%), Query Frame = 1 
Query:  421 KAMDIERAQLRSGKQ*TTWTTLRELCRSFQPKE 519
            KAMD ER QLRS        T+ EL  S QPKE
Sbjct:  216 KAMDAERQQLRSANN-KLRDTIEELRGSLQPKE 247
The following BLAST results are available for this feature:
BLAST of EY658310 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
GRIP_ARATH5.090e-4463.43Protein GRIP OS=Arabidopsis thaliana GN=GRIP PE=1 ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-135-H06-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY658310 ID=EY658310; Name=EY658310; organism=Citrus sinensis; type=EST; length=1034bp
AGGAAAGTAGGGAAGTTGTAGATGTCAAAGAACTCCGTGAAAGAATAGAG
TCTTTGAGTAAAGAACTTCAGGAAGAGAAAGAAACACGTGGTGCTGCGGA
GAAGGCTTTGGAGCATTTACGAGTGCAATATGAAGAGGCAGATGCAAAAG
CTCAAGAATTCTCTGCCAAGCTTGCGGAAGCTCAACAGAAGTTGGGTCAA
GAAATAAAAGGGCATGAGGATAAATACACTGAACTTGACTCCAAATTTAC
CAGACTTCACAAACGAGCAAAACAACGTATTCAAGAGGTTCAAAAGGAAA
AGGATGATCTTGAGACCAGACTCCGCGATGTGGGTGAAACAGCCGAGCGA
GCATCTTCCCAATGTTCAGCATTGCAGCAAGAGTTGGAGCGCACTCGGCA
ACAAGCAAATGATGCATTGAAAAGCCATGGATATAGAGAGGGCACAATTA
AGAAGTGGCAAACAATAAACTACGTGGACAACATTGAGGGAGTTGTGCCG
TTCATTTCAACCCAAAGAAAAATGGTCTTGGAGGCATTGCAGCTGGTCAC
TTTCGGAAAAAAGAATCAAAAGGTGGGAAAGACTGGCAAACCCTTACTAC
AGGCTGGCAAAAAAAAAAAGGGAAGGCTTCAATAACCAAAACTTTTCCGC
CAAACACTCAAAAAAATTTTAAAAGGAGTTTGGGAACCCCATTTGTGGGT
GATGGGTGTTATCGGGAAAAAACAAAAAAACCCCCGAAATCTTTTTTTTT
TCCCTTTCGGGGGGTTTATTTGGAGAAAAAAAAAAACACCAACATTGTGC
GGAAAAGGGGGGACCACTCTCTCCCATGGGGAGAAAAAAAACCCCGGGGT
TTAACGGTGCGGGCGGGGGGGAGAAAGGGGAAAAAGGGGGAGACTTTGTG
CCCCCTCTTTCAAATAGCGGGGGGCCCCCGGGGAAAAAGAGAAAAAAAGA
GGAATGAGAGGGGGGGGAGACAGCCCGCCCCCCCCCCCCCCAGCACGTCA
CTTCACAAAAAAAAAAAAAAAGACGGGGGTGGAA
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