EY658299

Overview
NameEY658299
Unique NameEY658299
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1048
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY658299 vs. ExPASy Swiss-Prot
Match: Y3544_ARATH (Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana GN=At3g25440 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.785e-23
Identity = 69/183 (37.70%), Postives = 96/183 (52.46%), Query Frame = 3
Query:    9 KKAKRNELRFYRLKAKKKINSPSPEVRIRYKLEKAKRKEAWLIEKLTKFELPKAPAEAYDPEILTDEERHYLKRTGEKKKNYVQXXXXXXXXXXXLNMHLHWKKHETVKVVCKPCEPGKIHEYAEVLAQLEQR-HCD*HQSEQY**YFIGGRNYVQPESNFPLQNTLIKRPGALEKFRYEQSL 554
            K+A    L+F+R K KK+    + E +I  KL KA++KE  L+E + K E  ++    +DPEILT EE  Y  + G K KNYV            LNMHLHWKKH+T++VV K   P ++ E A  LA+L      D H+      Y   G+NYVQP +        + R  AL+K +   +L
Sbjct:  114 KRAVVRWLKFFRWKKKKEFERMTSEEKILNKLRKARKKEERLMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNTIIMY--RGKNYVQPPTEIMSPRITLPRKKALDKSKCRDAL 294          
The following BLAST results are available for this feature:
BLAST of EY658299 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y3544_ARATH2.785e-2337.70Uncharacterized CRM domain-containing protein At3g... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-135-G05-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY658299 ID=EY658299; Name=EY658299; organism=Citrus sinensis; type=EST; length=1048bp
AGATGTCGAAGAAGGCCAAGAGGAACGAACTCAGGTTCTATCGTCTTAAG
GCTAAAAAGAAGATTAATTCTCCAAGTCCAGAAGTTAGGATCAGATACAA
ACTTGAGAAGGCAAAACGTAAGGAAGCATGGCTCATTGAGAAGTTGACCA
AATTTGAGCTTCCGAAAGCCCCGGCTGAAGCATATGATCCTGAAATTTTA
ACCGACGAAGAGAGGCACTACTTAAAACGTACCGGTGAGAAAAAAAAGAA
TTATGTCCAAGTTGGAAGACGGGGAGTATTTGGAGGTGTTGTTCTTAATA
TGCATCTTCATTGGAAGAAGCATGAAACTGTGAAGGTTGTTTGCAAACCC
TGTGAGCCAGGGAAAATTCATGAGTATGCTGAAGTGCTTGCTCAACTGGA
GCAAAGGCATTGTGATTGACATCAATCCGAGCAATACTAATAATATTTTA
TCGGGGGAAGGAACTATGTGCAGCCCGAAAGTAATTTCCCCCTCCAGAAT
ACCCTTATCAAAAGACCAGGGGCCCTGGAAAAGTTTAGGTACGAACAGTC
CCTTTGACCTAACGGGTGGGTTCCTTTGAAAAGGTTGGGAAAAAAAAAGC
TGGAGCCGATTTTAGGACCAGGTCCCCCAAAACAAAAAAAGGGAAAAAAG
GGATTGCCCAAACCGGCTCCTCCCCGATATATATTGCGGGGGGAAAAAAA
AAACAAAGGAATCGGCGAGGTTTTGGCGCGAGAAAACCTTTTAGTTGGGC
CGAGGCAACCAAAAGGCTGGTGGGGTTAAAATTTCTCAAAACCTCCTAAT
AATTAAAGAAAAGAGAAAAATCTGGTAAAAAAATTTTAGATGGCTCAGGA
GGTATTTCGACAAAGACAAAAATTTTGTAGTGGGGGAAAGAAAGCACATA
ATAAAATAAAAACAAACAAGAGGCAGTGGAGACGGAATGGGACGGGGTGT
TATNACAATAACGGTTTTAATAATGAGTTGAATTTATGTGGATTATTTTT
TGGTAAGTTATATATACGAAAAAAATAACGAAAAANGCAAACAACATG
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