EY675625

Overview
NameEY675625
Unique NameEY675625
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY675625 vs. ExPASy Swiss-Prot
Match: UPL7_ARATH (E3 ubiquitin-protein ligase UPL7 OS=Arabidopsis thaliana GN=UPL7 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 6.643e-45
Identity = 106/206 (51.46%), Postives = 128/206 (62.14%), Query Frame = 1 
Query:   13 TPHQNRPLMDSAIRCLHMMYERDCRHQFCPRVLWLSPAKRSRPPIAVAARTHEVLSANMRSDEXXXXXXXXXXXXXXPHVFPFEERVEMFREFISMDKVSRKIAGDVAGPGSRSIEIVVRRGHIVERWLSAIKF------PWIKVEFIYSWFHL*SECGLPETWAGTMVGAIKKVF*TDISKIAFLLPDYGAIFPKPQLSERLLIP 612
            T  ++R LMDSAIRCLH++YERDCRH FC   LWLSP + SRPPIA AARTHEVL     + +              PHVFPFEERV +FREFIS DK SRK+AG+V  PG+RSIEIVVRRGH+VE     +          I V F+       +E GLPE  AG   G + K F TDI+K AF   +YG +F +   S+RLL+P
Sbjct:  664 TGPESRQLMDSAIRCLHLLYERDCRHPFCASALWLSPGRTSRPPIAFAARTHEVLP----TSDVLTTPSMGSVITITPHVFPFEERVHVFREFISKDKASRKMAGEVDAPGARSIEIVVRRGHVVEDGFQQLNSIGSRLKSSIHVSFV-------NESGLPE--AGLDYGGLSKEFLTDITKAAF-ATEYG-LFSQTPTSDRLLVP 854
The following BLAST results are available for this feature:
BLAST of EY675625 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
UPL7_ARATH6.643e-4551.46E3 ubiquitin-protein ligase UPL7 OS=Arabidopsis th... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-013-B02-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675625 ID=EY675625; Name=EY675625; organism=Citrus sinensis; type=EST; length=957bp
ATTCTATGAGAAACACCTCATCAGAATAGGCCTCTTATGGATTCTGCAAT
TAGATGCTTGCATATGATGTATGAAAGGGACTGTAGGCACCAATTTTGCC
CCCGTGTTCTGTGGCTTTCACCTGCTAAAAGAAGCAGGCCCCCAATTGCA
GTAGCTGCCAGAACTCATGAAGTATTGTCAGCTAATATGAGATCAGATGA
ATCCTTAACTGTTTCTAGCTTGGGTTCTGTGGTCACCACTACTCCCCATG
TCTTTCCATTTGAAGAGAGAGTTGAAATGTTTCGAGAGTTCATTAGTATG
GATAAAGTCTCTCGAAAAATAGCTGGTGATGTGGCGGGACCTGGTTCACG
GTCCATTGAGATAGTAGTTCGCCGGGGTCATATTGTTGAAAGATGGCTTT
CGGCAATTAAATTCCCTTGGATCAAGGTTGAATTCATCTATTCATGGTTT
CATTTGTAAAGCGAATGTGGCCTTCCAGAAACCTGGGCTGGGACTATGGT
GGGGGCTATCAAAAAAGTTTTTTGAACTGATATATCAAAAATCGCCTTTT
TGCTCCCTGATTATGGGGCTATTTTTCCCAAACCTCAACTTTCAGAAAGG
CTCCTGATTCCCCTAAATGGTGGCCCCAAGAAAAATCAAGAAAAACGGAT
CCCAAAGGTTTTAAATTTCCTTTGGGGAAAAAATTTTTGGGTAAAAACAC
TTTTTAAAAAGGGAAATTACCTTGGATTTTTGCCTTTTTACAAATTTTTT
TGATGAAAAAATTTGGTTTTAAGGCCAAAAAAAACCTTCCTTGGGGGGAG
CCGGTCCCAACCCCTTTTATTACCAAAACTTCCATCCCAGAGAAATTCAG
ATTTGTGTGTAACACGCTATAGTAGTTGTAGGATAACCCCTGAAAGAAGA
ATGTTGGGTACGGGGGTTTTATCACAGAGCTATAAAAAAAAAATAATTTA
ATTTTTT
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