EY675619

Overview
NameEY675619
Unique NameEY675619
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675619 vs. ExPASy Swiss-Prot
Match: AMP1B_ARATH (Methionine aminopeptidase 1B, chloroplastic OS=Arabidopsis thaliana GN=MAP1B PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 5.114e-23
Identity = 69/156 (44.23%), Postives = 88/156 (56.41%), Query Frame = 3
Query:  105 SALFTGAPLSLSPSSTG--RQARCPNKLVVHAKRISGLEEAMRIRRERELQTTTKFRKRPPLRRGK-----------------------GISATSR-------A*SHTQASLSARVLDAAGKWVRPSVTTNEIDKAMHQMIIEAGTYPSPLRYRGF 476
            S  F GAP++ S  S    + +  P +  V AK++SGLEEA+RIR+ REL+T +K R+ PPLRRG+                        IS+  +       A       L+ARVL+ AG  V+PSVTTNEIDKA+H MIIEAG YPSPL Y GF
Sbjct:   30 SRCFLGAPVTSSSLSLSGKKNSYSPRQFHVSAKKVSGLEEAIRIRKMRELETKSKVRRNPPLRRGRVSPRLLVPDHIPRPPYVESGVLPDISSEFQIPGPEGIAKMRAACELAARVLNYAGTLVKPSVTTNEIDKAVHDMIIEAGAYPSPLGYGGF 185          
BLAST of EY675619 vs. ExPASy Swiss-Prot
Match: AMP1C_ARATH (Methionine aminopeptidase 1C, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=MAP1C PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 3.209e-14
Identity = 33/45 (73.33%), Postives = 37/45 (82.22%), Query Frame = 3
Query:  342 LSARVLDAAGKWVRPSVTTNEIDKAMHQMIIEAGTYPSPLRYRGF 476
            L+ARVLD AG  VRP VTT+EIDKA+HQM+IE G YPSPL Y GF
Sbjct:  114 LAARVLDYAGTLVRPFVTTDEIDKAVHQMVIEFGAYPSPLGYGGF 158          

HSP 2 Score: 31.5722 bits (70), Expect = 3.209e-14
Identity = 14/20 (70.00%), Postives = 15/20 (75.00%), Query Frame = 1
Query:  298 VSPRLPVPDHIPKPPYLRES 357
            VSPRL VPDHI KP Y+  S
Sbjct:   69 VSPRLSVPDHILKPLYVESS 88          
BLAST of EY675619 vs. ExPASy Swiss-Prot
Match: AMP1D_ARATH (Methionine aminopeptidase 1D, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=MAP1D PE=2 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 7.403e-13
Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 3
Query:  342 LSARVLDAAGKWVRPSVTTNEIDKAMHQMIIEAGTYPSPLRYRGF 476
            L+ARV D AG  V+P VTT+EID+A+H MIIE G YPSPL Y GF
Sbjct:  122 LAARVRDYAGTLVKPGVTTDEIDEAVHNMIIENGAYPSPLGYGGF 166          

HSP 2 Score: 32.7278 bits (73), Expect = 7.403e-13
Identity = 13/17 (76.47%), Postives = 14/17 (82.35%), Query Frame = 1
Query:  298 VSPRLPVPDHIPKPPYL 348
            VSPR PVP HI KPPY+
Sbjct:   77 VSPRRPVPGHITKPPYV 93          
The following BLAST results are available for this feature:
BLAST of EY675619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
AMP1B_ARATH5.114e-2344.23Methionine aminopeptidase 1B, chloroplastic OS=Ara... [more]
AMP1C_ARATH3.209e-1473.33Methionine aminopeptidase 1C, chloroplastic/mitoch... [more]
AMP1D_ARATH7.403e-1366.67Methionine aminopeptidase 1D, chloroplastic/mitoch... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-013-A06-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675619 ID=EY675619; Name=EY675619; organism=Citrus sinensis; type=EST; length=915bp
CCACGCGTCCGGAAAGAAGAATGGAATCCCCTTAATGAGTGTCGCATGGC
CACGGGTCATCTTCCTTCTCCCATGGATCAGCAAAACCAAAGTTAAACTC
TGCTTCAGCTCTTTTCACGGGGGCCCCACTGTCCCTCTCTCCATCCTCCA
CCGGAAGACAAGCACGTTGTCCAAATAAACTCGTCGTTCATGCAAAGAGA
ATTTCTGGTTTAGAGGAGGCCATGAGAATTAGGAGAGAACGTGAGCTTCA
AACTACAACTAAATTTAGAAAAAGACCACCTTTGAGGCGTGGAAAGGGTA
TCTCCGCGACTTCCCGTGCCTGATCACATACCCAAGCCTCCTTATCTGCG
CGAGTCCTGGATGCTGCTGGAAAATGGGTCAGGCCATCGGTGACGACCAA
TGAAATTGACAAAGCAATGCACCAAATGATAATAGAGGCTGGAACTTATC
CTTCACCTCTTAGGTATAGAGGATTTTCTAAAAGTGTGTGTTCATCAAGT
TAATGAATGCAATGGTGCCGAGGAAATACCAGATTTCTCGCCAAATTTAA
AGATGGTGGACAAAATAAAAAATTGATGGTGACAGTTTCTTTTAGTGGGT
TGGCTAGGGGGAGCCTGACAGAACGTTATTTTTACGGCCAAGGTTAAGGG
TGTGAGCATAAACACACTGAAGAAAGGTAAAAGAAAAAAATTTGGGAAAA
AGGAATGACAAGGAAGGAAGATAAGGAGATGATCTGAAAACAAAGACGAG
AAAAAGAAAACGACAGAGGCACGAAGGGAACAAGGGATTACGGACCACGG
GGCAAAGATTAGAGAGAAATGAGGAGGAAAGTAGAAAAAGAAGAAGAGAA
ACCAAAGGTAAACAGAAACAAGGGGAATTGAGGAAAACAGAGGCGAGAAC
GAAGCATAAGAGAAA
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