EY675617

Overview
NameEY675617
Unique NameEY675617
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length948
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: ARF_VIGUN (ADP-ribosylation factor OS=Vigna unguiculata GN=ARF PE=2 SV=3)

HSP 1 Score: 285.034 bits (728), Expect = 9.500e-78
Identity = 141/148 (95.27%), Postives = 143/148 (96.62%), Query Frame = 2
Query:   47 FCHPEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPKAMNAAKITDKLGLHSLRQRHGYLQSTCA 490
            F   EMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLP AMNAA+ITDKLGLHSLRQRH Y+QSTCA
Sbjct:   13 FAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCA 160          

HSP 2 Score: 27.7202 bits (60), Expect = 9.500e-78
Identity = 13/14 (92.86%), Postives = 13/14 (92.86%), Query Frame = 3
Query:   12 MPLSFTKLFSRLFA 53
            M LSFTKLFSRLFA
Sbjct:    1 MGLSFTKLFSRLFA 14          
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: ARF2_ARATH (ADP-ribosylation factor 2 OS=Arabidopsis thaliana GN=ARF2-A PE=2 SV=3)

HSP 1 Score: 285.034 bits (728), Expect = 3.586e-77
Identity = 141/148 (95.27%), Postives = 143/148 (96.62%), Query Frame = 2
Query:   47 FCHPEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPKAMNAAKITDKLGLHSLRQRHGYLQSTCA 490
            F   EMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLP AMNAA+ITDKLGLHSLRQRH Y+QSTCA
Sbjct:   13 FAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCA 160          

HSP 2 Score: 25.7942 bits (55), Expect = 3.586e-77
Identity = 12/14 (85.71%), Postives = 12/14 (85.71%), Query Frame = 3
Query:   12 MPLSFTKLFSRLFA 53
            M LSF KLFSRLFA
Sbjct:    1 MGLSFAKLFSRLFA 14          
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: ARF1_DAUCA (ADP-ribosylation factor 1 OS=Daucus carota GN=ARF1 PE=2 SV=2)

HSP 1 Score: 282.722 bits (722), Expect = 4.677e-77
Identity = 140/148 (94.59%), Postives = 142/148 (95.95%), Query Frame = 2
Query:   47 FCHPEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPKAMNAAKITDKLGLHSLRQRHGYLQSTCA 490
            F   EMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLP AMNAA+I DKLGLHSLRQRH Y+QSTCA
Sbjct:   13 FAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEIIDKLGLHSLRQRHWYIQSTCA 160          

HSP 2 Score: 27.7202 bits (60), Expect = 4.677e-77
Identity = 13/14 (92.86%), Postives = 13/14 (92.86%), Query Frame = 3
Query:   12 MPLSFTKLFSRLFA 53
            M LSFTKLFSRLFA
Sbjct:    1 MGLSFTKLFSRLFA 14          
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: ARF1_ARATH (ADP-ribosylation factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2)

HSP 1 Score: 285.034 bits (728), Expect = 6.100e-77
Identity = 141/148 (95.27%), Postives = 143/148 (96.62%), Query Frame = 2
Query:   47 FCHPEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPKAMNAAKITDKLGLHSLRQRHGYLQSTCA 490
            F   EMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLP AMNAA+ITDKLGLHSLRQRH Y+QSTCA
Sbjct:   13 FAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCA 160          

HSP 2 Score: 25.0238 bits (53), Expect = 6.100e-77
Identity = 12/14 (85.71%), Postives = 12/14 (85.71%), Query Frame = 3
Query:   12 MPLSFTKLFSRLFA 53
            M LSF KLFSRLFA
Sbjct:    1 MGLSFGKLFSRLFA 14          
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: ARF2_ORYSJ (ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica GN=ARF PE=2 SV=2)

HSP 1 Score: 283.493 bits (724), Expect = 6.100e-77
Identity = 140/148 (94.59%), Postives = 143/148 (96.62%), Query Frame = 2
Query:   47 FCHPEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPKAMNAAKITDKLGLHSLRQRHGYLQSTCA 490
            F   EMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RVVEARDELHRMLNEDELRDAVLLVFANKQDLP AMNAA+ITDKLGLHSLRQRH Y+QSTCA
Sbjct:   13 FAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCA 160          

HSP 2 Score: 26.5646 bits (57), Expect = 6.100e-77
Identity = 12/14 (85.71%), Postives = 13/14 (92.86%), Query Frame = 3
Query:   12 MPLSFTKLFSRLFA 53
            M L+FTKLFSRLFA
Sbjct:    1 MGLTFTKLFSRLFA 14          
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: ARF1_ORYSJ (ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica GN=Os01g0813400 PE=2 SV=3)

HSP 1 Score: 283.493 bits (724), Expect = 6.100e-77
Identity = 140/148 (94.59%), Postives = 143/148 (96.62%), Query Frame = 2
Query:   47 FCHPEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPKAMNAAKITDKLGLHSLRQRHGYLQSTCA 490
            F   EMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RVVEARDELHRMLNEDELRDAVLLVFANKQDLP AMNAA+ITDKLGLHSLRQRH Y+QSTCA
Sbjct:   13 FAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCA 160          

HSP 2 Score: 26.5646 bits (57), Expect = 6.100e-77
Identity = 12/14 (85.71%), Postives = 13/14 (92.86%), Query Frame = 3
Query:   12 MPLSFTKLFSRLFA 53
            M L+FTKLFSRLFA
Sbjct:    1 MGLTFTKLFSRLFA 14          
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: ARF_MAIZE (ADP-ribosylation factor OS=Zea mays GN=ARF1 PE=2 SV=2)

HSP 1 Score: 282.337 bits (721), Expect = 1.353e-76
Identity = 140/148 (94.59%), Postives = 143/148 (96.62%), Query Frame = 2
Query:   47 FCHPEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPKAMNAAKITDKLGLHSLRQRHGYLQSTCA 490
            F   EMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLP AMNAA+ITDKLGL+SLRQRH Y+QSTCA
Sbjct:   13 FAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLNSLRQRHWYIQSTCA 160          

HSP 2 Score: 26.5646 bits (57), Expect = 1.353e-76
Identity = 12/14 (85.71%), Postives = 13/14 (92.86%), Query Frame = 3
Query:   12 MPLSFTKLFSRLFA 53
            M L+FTKLFSRLFA
Sbjct:    1 MGLTFTKLFSRLFA 14          
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: ARF1_SALBA (ADP-ribosylation factor 1 OS=Salix bakko GN=ARF1 PE=2 SV=3)

HSP 1 Score: 281.952 bits (720), Expect = 2.515e-75
Identity = 140/148 (94.59%), Postives = 142/148 (95.95%), Query Frame = 2
Query:   47 FCHPEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPKAMNAAKITDKLGLHSLRQRHGYLQSTCA 490
            F   EMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRV EARDELHRMLNEDELRDAVLLVFANKQDLP AMNAA+ITDKLGLHSLRQRH Y+QSTCA
Sbjct:   13 FSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVGEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCA 160          

HSP 2 Score: 22.7126 bits (47), Expect = 2.515e-75
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 3
Query:   12 MPLSFTKLFSRLFA 53
            M LSFTKL  RLF+
Sbjct:    1 MGLSFTKLLGRLFS 14          
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: ARF1_CHLRE (ADP-ribosylation factor 1 OS=Chlamydomonas reinhardtii GN=ARF1 PE=2 SV=2)

HSP 1 Score: 282.337 bits (721), Expect = 2.710e-75
Identity = 140/148 (94.59%), Postives = 143/148 (96.62%), Query Frame = 2
Query:   47 FCHPEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPKAMNAAKITDKLGLHSLRQRHGYLQSTCA 490
            F   EMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RVVEARDELHRMLNEDELRDAVLLVFANKQDLP AMNAA+ITDKLGLHSLRQRH Y+QSTCA
Sbjct:   13 FGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCA 160          
BLAST of EY675617 vs. ExPASy Swiss-Prot
Match: ARF1_CATRO (ADP-ribosylation factor 1 OS=Catharanthus roseus GN=ARF1 PE=2 SV=3)

HSP 1 Score: 276.174 bits (705), Expect = 4.277e-75
Identity = 137/148 (92.57%), Postives = 141/148 (95.27%), Query Frame = 2
Query:   47 FCHPEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPKAMNAAKITDKLGLHSLRQRHGYLQSTCA 490
            F   EMRILMVGLDAAGKTTILY+LKLGEIVTTIPTIGFNVETVEY+ ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLP AMNAA+ITDK GLHSLRQRH Y+QSTCA
Sbjct:   13 FAKKEMRILMVGLDAAGKTTILYQLKLGEIVTTIPTIGFNVETVEYQYISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKHGLHSLRQRHWYIQSTCA 160          

HSP 2 Score: 27.7202 bits (60), Expect = 4.277e-75
Identity = 13/14 (92.86%), Postives = 13/14 (92.86%), Query Frame = 3
Query:   12 MPLSFTKLFSRLFA 53
            M LSFTKLFSRLFA
Sbjct:    1 MGLSFTKLFSRLFA 14          
The following BLAST results are available for this feature:
BLAST of EY675617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
ARF_VIGUN9.500e-7895.27ADP-ribosylation factor OS=Vigna unguiculata GN=AR... [more]
ARF2_ARATH3.586e-7795.27ADP-ribosylation factor 2 OS=Arabidopsis thaliana ... [more]
ARF1_DAUCA4.677e-7794.59ADP-ribosylation factor 1 OS=Daucus carota GN=ARF1... [more]
ARF1_ARATH6.100e-7795.27ADP-ribosylation factor 1 OS=Arabidopsis thaliana ... [more]
ARF2_ORYSJ6.100e-7794.59ADP-ribosylation factor 2 OS=Oryza sativa subsp. j... [more]
ARF1_ORYSJ6.100e-7794.59ADP-ribosylation factor 1 OS=Oryza sativa subsp. j... [more]
ARF_MAIZE1.353e-7694.59ADP-ribosylation factor OS=Zea mays GN=ARF1 PE=2 S... [more]
ARF1_SALBA2.515e-7594.59ADP-ribosylation factor 1 OS=Salix bakko GN=ARF1 P... [more]
ARF1_CHLRE2.710e-7594.59ADP-ribosylation factor 1 OS=Chlamydomonas reinhar... [more]
ARF1_CATRO4.277e-7592.57ADP-ribosylation factor 1 OS=Catharanthus roseus G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-013-A03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675617 ID=EY675617; Name=EY675617; organism=Citrus sinensis; type=EST; length=948bp
GATAACAGAAAATGCCGCTGTCATTTACGAAGCTTTTTAGCCGGCTTTTT
GCCACCCAGAGATGCGAATTCTGATGGTGGGTCTCGACGCTGCTGGTAAG
ACCACCATTTTGTACAAGCTCAAGCTCGGTGAGATTGTGACAACCATTCC
TACCATTGGTTTCAACGTGGAGACTGTGGAATATAAGAACATTAGCTTCA
CTGTTTGGGATGTTGGGGGTCAGGATAAGATTCGTCCTTTGTGGAGACAT
TACTTCCAAAACACTCAAGGACTTATCTTTGTGGTTGATAGCAATGATCG
TGACCGTGTGGTTGAAGCTAGAGATGAACTGCACCGGATGCTGAATGAGG
ATGAGTTGAGGGATGCTGTGCTGCTTGTTTTTGCCAACAAGCAAGATCTT
CCAAAGGCCATGAATGCTGCAAAGATCACTGATAAGCTTGGTCTTCACTC
CCTTCGTCAACGCCACGGGTACCTCCAGAGCACATGTGCCACATCTGGGG
AAGGGATCTAAGAAGGGTCTGGAACGGGTCCTCAAACAACATCCCAAAAC
AAAGGCTAATTTAATTGGTCCAAGTCTAAAACGAAATCTTTGCAGGCACA
TCCAAGGAGAAAGGAGGTTACTAGGCCTTTTGGTTTTTTTTGGGCGGGGG
ATTCTTTTTGGGGGTTTTAACAACCCAAAATCAAAAAAAATAGAAATTTG
GTATTGTGATAAAAAATTAAAATTATGGGACCCAAAAAAAAAAAAGTTTT
TTATCGCATAAAGCCTTTTGGAAAAGGATGAAAAATAACACCCCCAATTT
ATTTAGGAAATAATAAAGGGAGAATTTTATTGGGGCGAGTGAGTAATCCA
CCACTAAAAGTCATCACTCCATATAGTGACGGTGGAGAAGAGATGTGGCA
AAGAAAATATATTTTTATTATTAAACCCACCCAAAATAAGAAAATGAT
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