EY675603

Overview
NameEY675603
Unique NameEY675603
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1000
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675603 vs. ExPASy Swiss-Prot
Match: GSTF6_ARATH (Glutathione S-transferase 6, chloroplastic OS=Arabidopsis thaliana GN=GST6 PE=1 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 1.202e-15
Identity = 45/101 (44.55%), Postives = 54/101 (53.47%), Query Frame = 3
Query:  102 MAGIKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNVSCVNTDTTNSDPPINWIWEHNQFILISFVN*LMQPFGQVPVLEHGDQKLF 404
            MA IKVHG   STAT RV A+LYEK+L++EL+PVDM+AG HK+EA L+LN                                   PFGQ+P LE GD  LF
Sbjct:   49 MASIKVHGVPMSTATMRVLATLYEKDLQFELIPVDMRAGAHKQEAHLALN-----------------------------------PFGQIPALEDGDLTLF 114          

HSP 2 Score: 25.7942 bits (55), Expect = 1.202e-15
Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 2
Query:  521 KSRGIHQYIAQEFPEKG 571
            +SR I QY+A+E+ EKG
Sbjct:  115 ESRAITQYLAEEYSEKG 131          
BLAST of EY675603 vs. ExPASy Swiss-Prot
Match: GSTF2_TOBAC (Glutathione S-transferase APIC OS=Nicotiana tabacum GN=APIC PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 7.136e-13
Identity = 62/176 (35.23%), Postives = 77/176 (43.75%), Query Frame = 3
Query:  111 IKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNVSCVNTDTTNSDPPINWIWEHNQFILISFVN*LMQPFGQVPVLEHGDQKLFGTPTHSYLLLFSGLISGWLNFIPYLKLHSTKKF----FWDDVQNQGAFTNTSPRSFQKKGPHL-KLAPDSPIAPLMGM 623
            IKVHGS  STAT RV A L EK+L++ELVPVDM +GEHKK  +LSLN                                   PFGQVP  E GD KLF +   +  +      +G+      L L   KK      W +V+             QK  PH  KL  +  I P++GM
Sbjct:    3 IKVHGSPMSTATMRVAACLIEKDLDFELVPVDMVSGEHKKHPYLSLN-----------------------------------PFGQVPAFEDGDLKLFESRAITQYIAHVYADNGY-----QLILQDPKKMPIMSVWMEVEG------------QKFEPHASKLTWELGIKPIIGM 126          
BLAST of EY675603 vs. ExPASy Swiss-Prot
Match: GSTF1_TOBAC (Glutathione S-transferase PARB OS=Nicotiana tabacum GN=PARB PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 7.136e-13
Identity = 60/175 (34.29%), Postives = 76/175 (43.43%), Query Frame = 3
Query:  111 IKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNVSCVNTDTTNSDPPINWIWEHNQFILISFVN*LMQPFGQVPVLEHGDQKLFGTPTHSYLLLFSGLISGWLNFIPYLKLHSTKKF----FWDDVQNQGAFTNTSPRSFQKKGPHLKLAPDSPIAPLMGM 623
            IKVHGS  STAT RV A L EKEL++E VPVDM +GEHKK  +LSLN                                   PFGQVP  E GD KLF +   +  +      +G+      L L   KK      W +V+ Q           + + P  KL  +  I P++GM
Sbjct:    3 IKVHGSPMSTATMRVAACLIEKELDFEFVPVDMASGEHKKHPYLSLN-----------------------------------PFGQVPAFEDGDLKLFESRAITQYIAHVYADNGY-----QLILQDPKKMPSMSVWMEVEGQ-----------KFEPPATKLTWELGIKPIIGM 126          
BLAST of EY675603 vs. ExPASy Swiss-Prot
Match: GSTF_HYOMU (Glutathione S-transferase OS=Hyoscyamus muticus PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.119e-12
Identity = 40/99 (40.40%), Postives = 51/99 (51.52%), Query Frame = 3
Query:  108 GIKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNVSCVNTDTTNSDPPINWIWEHNQFILISFVN*LMQPFGQVPVLEHGDQKLF 404
            G+K+HG   S A  RV A+L EK+L++ELVPV+M+AG+HKKE F++LN                                   PFGQVP  E GD KLF
Sbjct:    2 GMKLHGPAMSPAVMRVIATLKEKDLDFELVPVNMQAGDHKKEPFITLN-----------------------------------PFGQVPAFEDGDLKLF 65          

HSP 2 Score: 22.3274 bits (46), Expect = 3.119e-12
Identity = 9/17 (52.94%), Postives = 12/17 (70.59%), Query Frame = 2
Query:  521 KSRGIHQYIAQEFPEKG 571
            +SR I QYIA  + +KG
Sbjct:   66 ESRAITQYIAHTYADKG 82          
BLAST of EY675603 vs. ExPASy Swiss-Prot
Match: GST16_ARATH (Glutathione S-transferase 16 OS=Arabidopsis thaliana GN=GST16 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 6.830e-12
Identity = 43/101 (42.57%), Postives = 51/101 (50.50%), Query Frame = 3
Query:  102 MAGIKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNVSCVNTDTTNSDPPINWIWEHNQFILISFVN*LMQPFGQVPVLEHGDQKLF 404
            MAGIKV G   ST+T+RV  +L+EK L++ELV V++K GEHKKE FLS N                                   PFGQVP  E GD KLF
Sbjct:    1 MAGIKVFGHPASTSTRRVLIALHEKNLDFELVHVELKDGEHKKEPFLSRN-----------------------------------PFGQVPAFEDGDLKLF 66          

HSP 2 Score: 22.3274 bits (46), Expect = 6.830e-12
Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 2
Query:  521 KSRGIHQYIAQEFPEKGT 574
            +SR I QYIA  +  +GT
Sbjct:   67 ESRAITQYIAHRYENQGT 84          
BLAST of EY675603 vs. ExPASy Swiss-Prot
Match: GSTF_SILCU (Glutathione S-transferase OS=Silene cucubalus GN=GST PE=1 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 7.890e-12
Identity = 42/98 (42.86%), Postives = 51/98 (52.04%), Query Frame = 3
Query:  111 IKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNVSCVNTDTTNSDPPINWIWEHNQFILISFVN*LMQPFGQVPVLEHGDQKLF 404
            IKVHG+  STATQRV  +LYEK LE+E VP+DM AG HK+ ++L+LN                                   PFGQVP LE G+ KLF
Sbjct:    3 IKVHGNPRSTATQRVLVALYEKHLEFEFVPIDMGAGGHKQPSYLALN-----------------------------------PFGQVPALEDGEIKLF 65          
BLAST of EY675603 vs. ExPASy Swiss-Prot
Match: GSTF4_ARATH (Glutathione S-transferase PM24 OS=Arabidopsis thaliana GN=PM24.1 PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 1.495e-11
Identity = 43/101 (42.57%), Postives = 50/101 (49.50%), Query Frame = 3
Query:  102 MAGIKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNVSCVNTDTTNSDPPINWIWEHNQFILISFVN*LMQPFGQVPVLEHGDQKLF 404
            MAGIKV G   S AT+RV  +L+EK L++ELV V++K GEHKKE FLS N                                   PFGQVP  E GD KLF
Sbjct:    1 MAGIKVFGHPASIATRRVLIALHEKNLDFELVHVELKDGEHKKEPFLSRN-----------------------------------PFGQVPAFEDGDLKLF 66          

HSP 2 Score: 22.3274 bits (46), Expect = 1.495e-11
Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 2
Query:  521 KSRGIHQYIAQEFPEKGT 574
            +SR I QYIA  +  +GT
Sbjct:   67 ESRAITQYIAHRYENQGT 84          
BLAST of EY675603 vs. ExPASy Swiss-Prot
Match: GSTF1_ARATH (Glutathione S-transferase 1 OS=Arabidopsis thaliana GN=GST1 PE=1 SV=2)

HSP 1 Score: 62.7734 bits (151), Expect = 7.166e-11
Identity = 38/101 (37.62%), Postives = 49/101 (48.51%), Query Frame = 3
Query:  102 MAGIKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNVSCVNTDTTNSDPPINWIWEHNQFILISFVN*LMQPFGQVPVLEHGDQKLF 404
            MAGIKV G   STAT+RV  +L+EK +++E V V++K GEHKKE F+                                   L  PFG+VP  E GD K+F
Sbjct:    1 MAGIKVFGHPASTATRRVLIALHEKNVDFEFVHVELKDGEHKKEPFI-----------------------------------LRNPFGKVPAFEDGDFKIF 66          

HSP 2 Score: 25.7942 bits (55), Expect = 7.166e-11
Identity = 11/17 (64.71%), Postives = 13/17 (76.47%), Query Frame = 2
Query:  521 KSRGIHQYIAQEFPEKG 571
            +SR I QYIA EF +KG
Sbjct:   67 ESRAITQYIAHEFSDKG 83          
The following BLAST results are available for this feature:
BLAST of EY675603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
GSTF6_ARATH1.202e-1544.55Glutathione S-transferase 6, chloroplastic OS=Arab... [more]
GSTF2_TOBAC7.136e-1335.23Glutathione S-transferase APIC OS=Nicotiana tabacu... [more]
GSTF1_TOBAC7.136e-1334.29Glutathione S-transferase PARB OS=Nicotiana tabacu... [more]
GSTF_HYOMU3.119e-1240.40Glutathione S-transferase OS=Hyoscyamus muticus PE... [more]
GST16_ARATH6.830e-1242.57Glutathione S-transferase 16 OS=Arabidopsis thalia... [more]
GSTF_SILCU7.890e-1242.86Glutathione S-transferase OS=Silene cucubalus GN=G... [more]
GSTF4_ARATH1.495e-1142.57Glutathione S-transferase PM24 OS=Arabidopsis thal... [more]
GSTF1_ARATH7.166e-1137.62Glutathione S-transferase 1 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-012-G08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675603 ID=EY675603; Name=EY675603; organism=Citrus sinensis; type=EST; length=1000bp
CCTGGCGGGTACGAGTTCCGGGATTCNNCGGGTCGACCCACTGCGTCCGC
ACAAGTCAAGTCACAACTCACAATAACAAGCGAGGGAAGGAAGACCCAAA
GATGGCAGGCATCAAGGTCCACGGTTCTGTTTTCTCAACTGCTACGCAGC
GAGTTTTCGCATCCCTCTACGAGAAGGAGCTCGAATACGAGCTTGTCCCC
GTAGACATGAAGGCTGGTGAACACAAAAAGGAGGCCTTCCTTTCTTTGAA
TGTAAGTTGTGTTAATACCGACACTACTAACTCAGATCCTCCTATTAATT
GGATATGGGAGCACAATCAATTTATACTCATTAGTTTCGTTAATTGATTG
ATGCAGCCATTCGGTCAAGTTCCGGTGCTTGAACACGGCGACCAGAAGCT
CTTCGGTACGCCCACTCACTCATACTTATTATTGTTTTCTGGCTTAATTA
GTGGGTGGCTAAATTTTATTCCTTACTTAAAATTGCATAGTACTAAAAAG
TTCTTTTGGGATGATGTACAAAATCAAGGGGCATTCACCAATACATCGCC
CAGGAGTTTCCAGAAAAAGGGACCCCATTTAAAATTGGCCCCGGACAGCC
CCATCGCCCCGTTAATGGGAATGGGAAAGGAGGGGGAGGGACCTCCAATT
CCAAACCCCCCAATTATCAAAACCTCAATTGGGGAGCCCGTGGTACGGGG
CCATGGTTTTGGAAATGACCAATGGAACCCCTATGGCGGTGAAGAAAAAA
AAATAAAAAAATAAAGCTACCCAAAAATTTTGAAGATGTTTAAAAAGGGC
CGAGATTGTCGATGTAAAAAATTAGAGAGGAGGGAGCGAAAAGTTATCCT
CATGAGTACAATTTAGCGACACATCCCACCACAAAAATTATAGATTATAT
ATGTAGTGGTAACAGCCGAAGAACAAAAACTGATTTTTATAAAAGCAACG
CCCACGCAACTTACGAACCATGGTGGGAGAAGGGAAAGATTAACAAATTT
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