EY675584

Overview
NameEY675584
Unique NameEY675584
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length981
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY675584_ssr120 microsatellite EY675584_ssr120:120..131. BLAST: Citrus ESTs to Prunus persica proteins V1
EY675584_ssr401 microsatellite EY675584_ssr401:401..415. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY675584 vs. ExPASy Swiss-Prot
Match: ZN207_HUMAN (Zinc finger protein 207 OS=Homo sapiens GN=ZNF207 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.373e-29
Identity = 53/75 (70.67%), Postives = 64/75 (85.33%), Query Frame = 3 
Query:  150 WCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIP 374
            WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHKE +  VPNA PGR   ++EIYGM+GIP
Sbjct:   12 WCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHKETIDAVPNAIPGRTDIELEIYGMEGIP 86
[Close]
BLAST of EY675584 vs. ExPASy Swiss-Prot
Match: ZN207_PONAB (Zinc finger protein 207 OS=Pongo abelii GN=ZNF207 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 5.287e-29
Identity = 53/75 (70.67%), Postives = 63/75 (84.00%), Query Frame = 3 
Query:  150 WCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIP 374
            WC+YC+R+FDDEKIL QHQKAKHFKCH+CHKKL T  G+AIH +QVHKE +  VPNA PGR   ++EIYGM+GIP
Sbjct:   12 WCWYCNRDFDDEKILTQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHKETIDAVPNAIPGRTDIELEIYGMEGIP 86
The following BLAST results are available for this feature:
BLAST of EY675584 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ZN207_HUMAN2.373e-2970.67Zinc finger protein 207 OS=Homo sapiens GN=ZNF207 ... [more]
ZN207_PONAB5.287e-2970.67Zinc finger protein 207 OS=Pongo abelii GN=ZNF207 ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-012-E07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675584 ID=EY675584; Name=EY675584; organism=Citrus sinensis; type=EST; length=981bp
ACGAGAGAGGGGAGACCCAGTAGGAAACCCTAATAAATCAATCGAGCGAG
AACGAGAGTGATTTTGATAAATTTTTTTTAAAGGCAAATAGAGAGAAACA
GGGAAGGGCAAAGATGGGAAAGAAGAAGAAGAGAGTATCGTCGAAGGTTT
GGTGCTATTACTGCGACAGGGAATTCGATGACGAAAAGATTTTAGTACAA
CATCAGAAAGCTAAGCACTTCAAGTGCCACGTGTGCCACAAGAAGCTCTC
CACCGCCGGCGGCATGGCCATTCACGTCCTTCAGGTTCACAAAGAGAATG
TCACCAAAGTACCTAATGCAAAACCAGGTCGAGAGTCGACCGACATTGAA
ATTTATGGAATGCAAGGAATACCACCTGATGTCTTAGCTGCTCATTATGG
AGAAGAAGAAGAAGAAGTTCCATCTAAAATGGCCAAAGTGGATACTTCTT
TCCCACAGCTGGTAGGTGGGGTGGTGCCAGGACAATTGGGTGTCAGCTAT
CCTCCTCAATCAACTTTTAGCATGATGCACCCAATTTATAGTTCTGCAGT
TCCCGTGCCTCCCGCTGGTTGCCAGGTGCCTCCTCCTCTTCAACCCTGGT
AACCCAAGCATGGCGCAATTTTCATTCCCCCCCCCTGGCTGGCGTGGGGG
TTAGCCCAACACCCCTTTATTTCCTGGGCAAAAATGGGGGGCCCCCCCCG
GGGATCGTCTAATTCAACCTGGCACCCAACCTTTTTCCCATAATTCCCCC
CCGGAAAGGCCCCCCTTCACCCCCCCCCGGGTTCACCATACCCCCACCCT
TTGTTTTCCTGGGGGGGAAAAAAAAAAAAAACACCAAAGCAAAAAAGTTC
CCCCTTTTTTTTCGGGCCCCCTATTTCCCCCCAACAAAAAGTAATGGGCA
CCGGGGGCCCCTTTCTCCCCAAAAAAAATTAAATGAGGGGGGTTTCCTGT
GTTAGTTGTGGGCCCACCCTTTTTTATAAGG
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