EY675400

Overview
NameEY675400
Unique NameEY675400
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length973
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675400 vs. ExPASy Swiss-Prot
Match: ILR3_ARATH (Transcription factor ILR3 OS=Arabidopsis thaliana GN=ILR3 PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 2.195e-35
Identity = 79/124 (63.71%), Postives = 89/124 (71.77%), Query Frame = 1
Query:   97 RFLELGSMLEPGTPPKTDKATILSDVVRMMEQLRTEAQKLKQSTEDLQEKIKELKAEKNELRDEKQRLKADKEKLEQQVKAMSA--PSGFLPHPXXXXXXXXXXXXXXXNKLVPFIGYPGVAMW 462
            +F+ELG++LEPG PPKTDKA IL D VRM+ QLR EAQKLK S   LQ+KIKELK EKNELRDEKQRLK +KEKLEQQ+KAM+A  PS F   P               NK+VP I YPGVAMW
Sbjct:   90 KFMELGAILEPGNPPKTDKAAILVDAVRMVTQLRGEAQKLKDSNSSLQDKIKELKTEKNELRDEKQRLKTEKEKLEQQLKAMNAPQPSFFPAPPMMPTAFASAQGQAPGNKMVPIISYPGVAMW 213          
BLAST of EY675400 vs. ExPASy Swiss-Prot
Match: BH115_ARATH (Transcription factor bHLH115 OS=Arabidopsis thaliana GN=BHLH115 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.433e-28
Identity = 67/126 (53.17%), Postives = 82/126 (65.08%), Query Frame = 1
Query:   97 RFLELGSMLEPGTPPKTDKATILSDVVRMMEQLRTEAQKLKQSTEDLQEKIKELKAEKNELRDEKQRLKADKEKLEQQVKAMSAPSG----FLPHPXXXXXXXXXXXXXXXNKLVPFIGYPGVAMW 462
            +F EL S+LEPG  PKTDK  I++D +RM+ Q R EAQKLK     LQEKIKELK EKNELRDEKQ+LK +KE+++QQ+KA+         FLP+P               +KLVPF  YPG AMW
Sbjct:   85 KFTELSSVLEPGRTPKTDKVAIINDAIRMVNQARDEAQKLKDLNSSLQEKIKELKDEKNELRDEKQKLKVEKERIDQQLKAIKTQPQPQPCFLPNP-----QTLSQAQAPGSKLVPFTTYPGFAMW 205          
BLAST of EY675400 vs. ExPASy Swiss-Prot
Match: BH104_ARATH (Transcription factor bHLH104 OS=Arabidopsis thaliana GN=BHLH104 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.577e-25
Identity = 63/123 (51.22%), Postives = 82/123 (66.67%), Query Frame = 1
Query:   97 RFLELGSMLEPGTPPKTDKATILSDVVRMMEQLRTEAQKLKQSTEDLQEKIKELKAEKNELRDEKQRLKADKEKLEQQVKAMSAP-SGFLPHPXXXXXXXXXXXXXXXNKLVPFIGYPGVAMW 462
            RF++L S+LEPG  PKTDK  IL D +R++ QLR EA KL+++ + L E+IK LKAEKNELR+EK  LKADKEK EQQ+K+M+AP SGF+PH                NK+  +  Y  + MW
Sbjct:  149 RFMDLSSVLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEETNQKLLEEIKSLKAEKNELREEKLVLKADKEKTEQQLKSMTAPSSGFIPH---------IPAAFNHNKMAVYPSYGYMPMW 262          
BLAST of EY675400 vs. ExPASy Swiss-Prot
Match: BH034_ARATH (Transcription factor bHLH34 OS=Arabidopsis thaliana GN=BHLH34 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 9.565e-23
Identity = 54/95 (56.84%), Postives = 75/95 (78.95%), Query Frame = 1
Query:   97 RFLELGSMLEPGTPPKTDKATILSDVVRMMEQLRTEAQKLKQSTEDLQEKIKELKAEKNELRDEKQRLKADKEKLEQQVKAMSAPS-GFLP--HP 372
            +F++L S+LEPG  PKTDK+ IL D +R++ QLR EA +L+++ + L E+IK LKA+KNELR+EK  LKA+KEK+EQQ+K+M  PS GF+P  HP
Sbjct:  181 KFMDLSSVLEPGRTPKTDKSAILDDAIRVVNQLRGEAHELQETNQKLLEEIKSLKADKNELREEKLVLKAEKEKMEQQLKSMVVPSPGFMPSQHP 275          
BLAST of EY675400 vs. ExPASy Swiss-Prot
Match: BH121_ARATH (Transcription factor bHLH121 OS=Arabidopsis thaliana GN=BHLH121 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.999e-12
Identity = 40/94 (42.55%), Postives = 63/94 (67.02%), Query Frame = 1
Query:  100 FLELGSMLEPGTPPKTDKATILSDVVRMMEQLRTEAQKLKQSTEDLQEKIKELKAEKNELRDEKQRLKADKEKL----EQQVKAMSAPSGFLPH 369
            F+ELG++L+P  P K DKATIL+D V+++++L +E  KLK     L ++ +EL  EKN+LR+EK  LK+D E L    +Q++++MS     + H
Sbjct:   78 FVELGNVLDPERP-KNDKATILTDTVQLLKELTSEVNKLKSEYTALTDESRELTQEKNDLREEKTSLKSDIENLNLQYQQRLRSMSPWGAAMDH 170          
BLAST of EY675400 vs. ExPASy Swiss-Prot
Match: BH011_ARATH (Transcription factor bHLH11 OS=Arabidopsis thaliana GN=BHLH11 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 8.399e-11
Identity = 34/78 (43.59%), Postives = 54/78 (69.23%), Query Frame = 1
Query:   97 RFLELGSMLEPGTPPKTDKATILSDVVRMMEQLRTEAQKLKQSTEDLQEKIKELKAEKNELRDEKQRLKADKEKLEQQ 330
            +FLELG+ L+P  P K+DKA++L+D ++M++ +  +  +LK   E L ++ +EL  EK+ELR+EK  LK+D E L  Q
Sbjct:   63 QFLELGNALDPNRP-KSDKASVLTDTIQMLKDVMNQVDRLKAEYETLSQESRELIQEKSELREEKATLKSDIEILNAQ 139          
The following BLAST results are available for this feature:
BLAST of EY675400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
ILR3_ARATH2.195e-3563.71Transcription factor ILR3 OS=Arabidopsis thaliana ... [more]
BH115_ARATH4.433e-2853.17Transcription factor bHLH115 OS=Arabidopsis thalia... [more]
BH104_ARATH1.577e-2551.22Transcription factor bHLH104 OS=Arabidopsis thalia... [more]
BH034_ARATH9.565e-2356.84Transcription factor bHLH34 OS=Arabidopsis thalian... [more]
BH121_ARATH1.999e-1242.55Transcription factor bHLH121 OS=Arabidopsis thalia... [more]
BH011_ARATH8.399e-1143.59Transcription factor bHLH11 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-010-A09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675400 ID=EY675400; Name=EY675400; organism=Citrus sinensis; type=EST; length=973bp
ATTACGGTTGAATGAGCCGCTTGAGATCATTCGTTTTCTTCCCTAATTAA
CTGTTTTCCGACTTCAAATTCTCACATTTATTTGGGCATGATCTGAAGGT
TTCTGGAATTGGGTTCTATGTTGGAGCCCGGAACACCACCCAAGACGGAC
AAGGCTACTATTTTGAGCGATGTTGTTCGAATGATGGAGCAGTTAAGAAC
TGAAGCCCAGAAACTGAAGCAATCGACTGAGGATTTGCAAGAAAAGATTA
AAGAATTGAAGGCTGAGAAGAATGAGCTCCGTGATGAGAAGCAGAGGCTA
AAGGCTGATAAAGAGAAGTTGGAACAGCAAGTCAAAGCGATGAGTGCTCC
ATCAGGGTTTTTGCCTCATCCCTCTTCAATGTCGGCTGCATTTGCTGCCC
AAAGCCAGGTTGCTAGTAACAAGCTGGTGCCTTTCATTGGTTACCCTGGC
GTTGCAATGTGGGCAATTCATGCCTCCCGCTGCTGGTTGAAACATCCCAG
GGATTCATGTACTTAGTCCTCCCGGTGGCTTAACTTGAGACCTCTAATTA
ATATTCCTTAAGTTGGAAAGGTTGTTTATCCGGTTTTTTTGGCCCCCTAA
GATAAGGTATGGGCTTTGGAAGAAACGGAAAAACTTATAAGAATATGGAA
TAATTTTCCCATTTATGTTTTTTTGAATACAAAAAAAAAAAAAAAAAAAA
AGGGGCGGGGCCCCCCCCTATAGGAAATCCAAGCCTATAAAGTATAAACC
GTTACATGTCAAAAGTACAAAATACCTCCTTTTAAAATAGTGTGAACCAT
AAAATTTAAATTTTTTTCGGGGGACGAGTTGATTTTTTTTTAAAGCGCCT
ACAGGGAGAGTGGGGAGAAAAAACACCCGGGGGGGTTTCATCCCACACAT
TTTTGTAAATATCCCCTCTGTGGTTCGAATACACCAATATCCCCCCTACC
CTTTTTTTTATCCACCCCACCAC
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