EY675397

Overview
NameEY675397
Unique NameEY675397
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1047
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8040 contig Csv1_Contig8040:34..1080. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
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BLAST of EY675397 vs. ExPASy Swiss-Prot
Match: PILG_PSEAE (Protein pilG OS=Pseudomonas aeruginosa GN=pilG PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 8.715e-17
Identity = 44/52 (84.62%), Postives = 46/52 (88.46%), Query Frame = -1 
Query:   13 MEQHSNALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKRVDHHP 168
            MEQ S+ LKVMVIDDSKTIRRTAETLLK VGC+VITAIDGFDALAK  D HP
Sbjct:    1 MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHP 52
The following BLAST results are available for this feature:
BLAST of EY675397 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PILG_PSEAE8.715e-1784.62Protein pilG OS=Pseudomonas aeruginosa GN=pilG PE=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-010-A05-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675397 ID=EY675397; Name=EY675397; organism=Citrus sinensis; type=EST; length=1047bp
AAGATAATGTGCNGGGTGATGGTCAACCCTCTTGGCCAGGGCATCGAAAC
CGTCGATGGCTGTGATGACCTCACACCCTACGTTCTTCAACAGTGTTTCG
GCCGTGCGGCGAATCGTTTTCGAATCGTCGATCACCATCACTTTCAAGGC
GTTGGAATGCTGTTCCATATCTGCTCTACCATCGCCACAGCGAATAGGTT
TTCGGTGTGTACTGCCTGATGTTGCACAGGTCGAGCGCCAAAAGCCTCGG
AATTCAAGGGCTGATGTGCCATGGCAGCCTTTTTAGCACAGTCTCAGAAC
GCAATCTATCGGCCGACCCGCGCGGTGGTTTTTCCTTGACCCACAACAGC
CGCAGCGCCACTCTGACGCCACTTTTATGCGCCCTTATTTGCTAGAGGAA
ATCCCCCATGAGCGTTCGCGTCGGCATTGTCGTGGACCCTATCGCCAGCC
TTTCCTATAAAAAGGACACCTCGCTGGCCATGCTGCTGGCCGCCCAACCC
CCCGGCGGGAGCCTGTTCTAAATGGGAACAGCCGGAACTTTACAAGGGCA
ACGGTGAAGCGCCGGGTGTGCATAAAAGGAGGAAATGAAGAGTTGGGAAA
GGGGGAAGTAGACCGGCCAAGGAAGAGAAGAACAAAAAGAGCGAAGGGGC
CATGGATCTGAAAGGAGTGCTTAAGCATGAGAGATAGTCTGCAATATAAA
AAAGGAATCAGCGCAGATTCAGCGAAAACATCGGCAGTCGAAAAAAAAAA
ACCAAAGAATAAGGAAGAGAAAAAAAGCCGAATGAATTAAAAAGAGAAGT
GAATGTGGAAAGATTTTCATGAGAAGATGTAAAAGAAGGCGGAGTGGGGG
AAAGAAGATGGTAAGAAGTGACGGAGGAGAGAACACAACGAAAGAGGACT
CATCAGGAGAAGGAAATATAAGGAAAAAGAGAATAAAGACGATGTGGGGA
AGGATATGTAGGATTTGGGAGGAGATATAACAAAGACAGAAGAGGGGGGT
ACGGAGGGGGGTAGGAGCTGAGGACGAGGGAGGGTATTAGCAGGAAG
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