EY675346

Overview
NameEY675346
Unique NameEY675346
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1006
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY675346 vs. ExPASy Swiss-Prot
Match: MCM8_HUMAN (DNA replication licensing factor MCM8 OS=Homo sapiens GN=MCM8 PE=1 SV=2)

HSP 1 Score: 47.3654 bits (111), Expect = 7.037e-11
Identity = 29/76 (38.16%), Postives = 45/76 (59.21%), Query Frame = 3 
Query:  264 LSEEKDTEPLTDIWPLA--MLRRYIYFVKGYFKPILTKEAEKVISSYY-QLQRRSATQNAARTTVRMLESLIRLAQ 482
            LSE     P   I P+   +LR+YI + + Y  P L+ EA +V+  +Y +L+++S   N++  T R LESLIRL +
Sbjct:  646 LSERLKVVPGETIDPIPHQLLRKYIGYARQYVYPRLSTEAARVLQDFYLELRKQSQRLNSSPITTRQLESLIRLTE 721

HSP 2 Score: 41.2022 bits (95), Expect = 7.037e-11
Identity = 18/39 (46.15%), Postives = 26/39 (66.67%), Query Frame = 1 
Query:   55 LSANTTLSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILA 171
            +S N  +   LLSRFD+V +LLDT N   D ++S H++A
Sbjct:  573 VSENLKMGSALLSRFDLVFILLDTPNEHHDHLLSEHVIA 611
The following BLAST results are available for this feature:
BLAST of EY675346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MCM8_HUMAN7.037e-1138.16DNA replication licensing factor MCM8 OS=Homo sapi... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-009-D03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675346 ID=EY675346; Name=EY675346; organism=Citrus sinensis; type=EST; length=1006bp
CTTTATTATTTCTTATACACCCCTTGGTTGCAATATTCTTAACCTCTTCT
AGCCCTCTCTGCCAATACAACACTTTCTGGTCCCTTATTGAGCAGATTTG
ATATAGTTCTTGTCCTCCTGGACACTAAAAATCCTGAATGGGATGCTGTT
GTATCATCTCACATTCTTGCTGAGGTAAAGTAAGCTTTAATTATGGATTT
AGAATCATAAAGGACTTGAAAATTTGTAAATATTGGCTTCTTCTGAACTA
ATGTCAGGGAGGACTTAGCGAAGAGAAGGACACTGAACCTCTAACAGATA
TCTGGCCATTAGCAATGCTTCGCAGGTACATTTACTTCGTAAAAGGATAC
TTCAAACCGATCCTTACGAAGGAAGCTGAAAAAGTAATCTCAAGCTATTA
TCAACTCCAAAGAAGATCTGCGACCCAGAATGCAGCCAGGACAACCGTGC
GGATGTTAGAAAGTTTGATACGCCTAGCTCAAGGTATGTACGTTTACTAT
TGGCTTATTCTTCCAATGAGAAATTTCTACTTTTATCCTCATGGGAAATT
AAATCCATTGGCTGTTGCACCTCTTGCAAAAATAATGGTTCAAAAATGGA
AATTTACTCCATTTAAACCCTATTTACTGGCATTTTTTATGCCTTTGAAA
TCATCCCCTGAACACCTCCAGCCCATAGTGGGAAAAGGGGTTTGGGGGAA
ACCCCCCGGCATTTAAATTTTCCAGGAAAAAATCCCGGATTCTAAAAAAG
ATTTTCCTTTTTTTTTTTTAATTACCCCTGGTGAAATTTTATTCAGGTCA
CATTTTGTGCATTAAAAATATTAAAAAAATAAAATTTCACGTTGCCCCTC
CGCAAAAAATTTTTTTAAAATCATTCTGGAAAATTTTTCATAAAAAAATT
GGCGTCCCATAAAAATAATGGAGAAGGATGTTTGCCCAAAATTTAGTAAA
TGTTTTTTTACAAGGGAGAAGGTAATATTTTTTTAATCACCGAACATGAG
GATTTT
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