EY675326

Overview
NameEY675326
Unique NameEY675326
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1073
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY675326_ssr964 microsatellite EY675326_ssr964:964..973. BLAST: Citrus ESTs to SwissProt
Homology
BLAST of EY675326 vs. ExPASy Swiss-Prot
Match: URAA_PASMU (Probable uracil permease OS=Pasteurella multocida GN=uraA PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.995e-20
Identity = 59/169 (34.91%), Postives = 92/169 (54.44%), Query Frame = -1
Query:   30 LDPNVALFYRRLGHLVVP--SGHRAPSPGVPGVEAFAFITPIILAKGQFGLAATMGGVMAAGFVYTFLGLAVKIKGTGFIDRXXXXXXXXXXXXXXXLAMAPIAANMAMGKAGDGSELIHYQTAMLISMPALLTTLIVAVFGKGIFRLVPIISGVLVGFAMSFYFGVVD 530
            L+ N AL    +G L+    +G + P   +    +FAFI PI      +G+A TMGG++  G VY  L   VKIKG G + +               + +AP+A +MA+GK    +    Y  A+ +SM  LLTTL VAVF KG+ +L+PI+ G++VG+ +  + G+++
Sbjct:   41 LNANTALLTAGIGTLLFQLCTGRQVP---IFLASSFAFIAPIQYGVTTWGIATTMGGLVFTGLVYFALSTLVKIKGAGALQKVFPPVVVGPVIIIIGMGLAPVAVDMALGK----NSTYQYNDAVFVSMATLLTTLGVAVFAKGMMKLIPIMFGIVVGYILCLFLGLIN 202          
BLAST of EY675326 vs. ExPASy Swiss-Prot
Match: URAA_HAEIN (Probable uracil permease OS=Haemophilus influenzae GN=uraA PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 9.633e-19
Identity = 58/169 (34.32%), Postives = 89/169 (52.66%), Query Frame = -1
Query:   30 LDPNVALFYRRLGHLVVP--SGHRAPSPGVPGVEAFAFITPIILAKGQFGLAATMGGVMAAGFVYTFLGLAVKIKGTGFIDRXXXXXXXXXXXXXXXLAMAPIAANMAMGKAGDGSELIHYQTAMLISMPALLTTLIVAVFGKGIFRLVPIISGVLVGFAMSFYFGVVD 530
            LD N AL    +G L+    +G + P   +    +FAFI PI      +G+A TMGG+   G VY  L   VK++G   + R               + +APIA +M++GK    +    Y  A+L+SM  LLTTL VAVF KG+ +L+PI+ G+  G+ +  + G+++
Sbjct:   42 LDSNTALLTAGVGTLLFQFCTGKQVP---IFLASSFAFIAPIQYGVQTWGIATTMGGLAFTGLVYFALSTLVKLRGAEALQRFFPPVVVGPVIIIIGMGLAPIAVDMSLGK----NSAYAYNDAVLVSMVTLLTTLSVAVFAKGLMKLIPIMFGITAGYILCLFLGLIN 203          
BLAST of EY675326 vs. ExPASy Swiss-Prot
Match: PYRP_BACSU (Uracil permease OS=Bacillus subtilis GN=pyrP PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 1.219e-13
Identity = 51/167 (30.54%), Postives = 80/167 (47.90%), Query Frame = -1
Query:   30 LDPNVALFYRRLGHLVVPSGHRAPSPGVPGVEAFAFITPIILAKGQFGLAATMGGVMAAGFVYTFLGLAVKIKGTGFIDRXXXXXXXXXXXXXXXLAMAPIAANMAMGKAGDGSELIHYQTAMLISMPALLTTLIVAVFGKGIFRLVPIISGVLVGFAMSFYFGVVD 530
            + P VAL    +G L      +   P   G  +FAFI+PIIL K   G  A M G   AG VY  + L ++  GTG++ +               L +A  A NMAM    + SEL++      ++   L  T+I A+F +G   L+P++ G++ G+  +   G+V+
Sbjct:   43 MSPAVALVTSGIGTLAYLLITKGQIPAYLG-SSFAFISPIILVKATGGPGAAMVGAFLAGLVYGLIALLIRQLGTGWLMKILPPVVVGPVIIVIGLGLASTAVNMAMYADPNASELVYSLKHFSVAGVTLAITIICAIFLRGFLSLIPVLIGIIGGYLFALTQGIVN 208          
BLAST of EY675326 vs. ExPASy Swiss-Prot
Match: PYRP_BACCL (Uracil permease OS=Bacillus caldolyticus GN=pyrP PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.920e-12
Identity = 50/167 (29.94%), Postives = 78/167 (46.71%), Query Frame = -1
Query:   30 LDPNVALFYRRLGHLVVPSGHRAPSPGVPGVEAFAFITPIILAKGQFGLAATMGGVMAAGFVYTFLGLAVKIKGTGFIDRXXXXXXXXXXXXXXXLAMAPIAANMAMGKAGDGSELIHYQTAMLISMPALLTTLIVAVFGKGIFRLVPIISGVLVGFAMSFYFGVVD 530
            LDP++AL    LG L      +   P   G  +FA+I PII AK   G  A M G   AG VY  + L +K  G  ++ +               L +A  A  MAM        L+H+  A++     L  T++ +V  +G+  L+P++ G++VG+  +   G+VD
Sbjct:   41 LDPSIALLTSGLGTLAFLLITKWQVPAYLG-SSFAYIAPIIAAKTAGGPGAAMIGSFLAGLVYGVVALIIKKAGYRWVMKLLPPVVVGPVIIVIGLGLAGTAVGMAMNGPDGKYSLLHFSVALV----TLAATIVCSVLARGMLSLIPVLVGIVVGYLYALAVGLVD 202          
BLAST of EY675326 vs. ExPASy Swiss-Prot
Match: URAA_ECOLI (Uracil permease OS=Escherichia coli (strain K12) GN=uraA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.490e-11
Identity = 52/185 (28.11%), Postives = 86/185 (46.49%), Query Frame = -1
Query:    3 LDPNVALFYRRLGHLVVPSGHRAPSPGVPGVEAFAFITPIILAKGQFGLAATMGGVMAAGFVYTFLGLAVKIKGTGFIDRXXXXXXXXXXXXXXXLAMAPIAANMAMGKAGDGSELIHYQTAMLISMPALLTTLIVAVFGKGIFRLVPIISGVLVGFAMSFYFGVVDP---------GIRTLYRP 530
            ++P   L +  +G L+     +   P   G  +FAFI+P++L     G    +GG +  G ++  +   VK  GTG++D                L +A +AA MA     +G         ++IS+  L  T++ +V  +G   ++PI+ GVLVG+A+SF  G+VD           + TLY P
Sbjct:   41 INPATVLLFNGIGTLLYLFICKGKIPAYLG-SSFAFISPVLLLL-PLGYEVALGGFIMCGVLFCLVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQT--PDSKTIIISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTLYTP 221          
BLAST of EY675326 vs. ExPASy Swiss-Prot
Match: URAA_ECO57 (Uracil permease OS=Escherichia coli O157:H7 GN=uraA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.490e-11
Identity = 52/185 (28.11%), Postives = 86/185 (46.49%), Query Frame = -1
Query:    3 LDPNVALFYRRLGHLVVPSGHRAPSPGVPGVEAFAFITPIILAKGQFGLAATMGGVMAAGFVYTFLGLAVKIKGTGFIDRXXXXXXXXXXXXXXXLAMAPIAANMAMGKAGDGSELIHYQTAMLISMPALLTTLIVAVFGKGIFRLVPIISGVLVGFAMSFYFGVVDP---------GIRTLYRP 530
            ++P   L +  +G L+     +   P   G  +FAFI+P++L     G    +GG +  G ++  +   VK  GTG++D                L +A +AA MA     +G         ++IS+  L  T++ +V  +G   ++PI+ GVLVG+A+SF  G+VD           + TLY P
Sbjct:   41 INPATVLLFNGIGTLLYLFICKGKIPAYLG-SSFAFISPVLLLL-PLGYEVALGGFIMCGVLFCLVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQT--PDSKTIIISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTLYTP 221          
The following BLAST results are available for this feature:
BLAST of EY675326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
URAA_PASMU2.995e-2034.91Probable uracil permease OS=Pasteurella multocida ... [more]
URAA_HAEIN9.633e-1934.32Probable uracil permease OS=Haemophilus influenzae... [more]
PYRP_BACSU1.219e-1330.54Uracil permease OS=Bacillus subtilis GN=pyrP PE=1 ... [more]
PYRP_BACCL3.920e-1229.94Uracil permease OS=Bacillus caldolyticus GN=pyrP P... [more]
URAA_ECOLI1.490e-1128.11Uracil permease OS=Escherichia coli (strain K12) G... [more]
URAA_ECO571.490e-1128.11Uracil permease OS=Escherichia coli O157:H7 GN=ura... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-009-B04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675326 ID=EY675326; Name=EY675326; organism=Citrus sinensis; type=EST; length=1073bp
CCCGGCCGGTACAGGGTCCGGATTCCCGGGTCGACTACACCGAAGTAGAA
CGACATGGCGAAACCCACCAGCACGCCGGAGATGATCGGCACCAGGCGGA
AAATGCCTTTGCCGAATACCGCCACGATCAATGTGGTCAGCAGCGCCGGC
ATCGAGATCAGCATGGCGGTTTGGTAGTGGATCAACTCGCTACCGTCACC
CGCCTTGCCCATCGCCATGTTGGCGGCAATCGGCGCCATGGCCAGGCCGA
TGGAGATAATCACCGGCCCGATCACCACCGGCGGCAGCAGCCGGTCGATG
AAACCGGTGCCCTTGATCTTCACCGCCAGCCCCAGGAAGGTGTAAACGAA
ACCTGCCGCCATCACGCCGCCCATGGTCGCCGCGAGGCCGAATTGGCCTT
TGGCGAGAATGATCGGGGTGATAAACGCAAAAGCTTCGACGCCAGGAACA
CCGGGACTTGGCGCCCGGTGACCACTTGGAACAACAAGGTGCCCAAGCCT
GCGGTAAAACAGGGCGACGTTTGGATCGAGAACCGGTGATCAGCGGCATC
AACACCCAGCGCGCCCAAAGGCAACGAAAGAACATCCTGGGCCCCAGACA
GGATCCGGGGGCCAAAGCGGGTCGTTAAATTCCTTCCTGCTTGGCCCCCC
CTCCTTTCCTGCTGGGATACCAAAAATTTTGGTCCCCGGGGGTCCCCCCA
AGACCCCGGGAATATTTTACCCCGTGTTTCTTTTCGGGCGTTCTTTACAT
GGGACCGCGGTGGAAAAAATAAAAAAGTCCGGGGGTGGGCTTTTTCTTAA
CAGGGCGGACATAATCCTTTCTTGGGGAGAGGAATATCAAAAAAACTGAG
GGAGCGCGAAAAATCCAATGGTAATGAGAGGATATTTATTCAAAAGAGAG
AAAGATAAGAGGGGGTAAACCACCTTGTTATAAAACCACTTAGGGGGGTG
GAATACCAGTATAGTGTGTGTGTAAAATGTCTTTTATCGATTGCAATAAA
GATTATTAATTTTATAGTTTTATTCTCGGGGGGGTAAAGTNAATGATTTT
TGAAATTTGCTCACAGATGTTGT
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