EY675274

Overview
NameEY675274
Unique NameEY675274
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length631
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY675274 vs. ExPASy Swiss-Prot
Match: YGAF_ECOLI (Uncharacterized protein ygaF OS=Escherichia coli (strain K12) GN=ygaF PE=1 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 6.054e-15
Identity = 37/72 (51.39%), Postives = 54/72 (75.00%), Query Frame = 2 
Query:    8 CKRGAEATKQFCTEHGIKFEVCGKLLVASTPLEVQRMEALYARSQLNGMKVERLDAHQLRPREPKIFGLGGL 223
            C  G  ATK FC ++GI+++ CGK+LVA++ LE++RM AL+ R+  NG++ E L+A +LR REP I GLGG+
Sbjct:   66 CLAGNRATKAFCDQNGIRYDNCGKMLVATSDLEMERMRALWERTAANGIEREWLNADELREREPNITGLGGI 137
The following BLAST results are available for this feature:
BLAST of EY675274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YGAF_ECOLI6.054e-1551.39Uncharacterized protein ygaF OS=Escherichia coli (... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-008-E02-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675274 ID=EY675274; Name=EY675274; organism=Citrus sinensis; type=EST; length=631bp
CGACTTGTGCAAACGGGGCGCCGAAGCCACCAAGCAGTTCTGCACCGAGC
ACGGGATCAAGTTCGAGGTGTGCGGCAAGTTGCTGGTGGCCTCGACCCCG
CTGGAAGTGCAGCGAATGGAAGCCCTGTACGCCCGCTCGCAGCTCAACGG
CATGAAGGTCGAACGCCTGGACGCCCACCAGTTGCGCCCGCGCGAACCAA
AAATCTTCGGGCTGGGCGGGTTGGTTCCCAACCGCCACCCGGATCCTCCA
ATAACCGCGAAATCTGGGAAACCATGGCCCCGGGTCTTCCGCCCCGGGCG
GGGGGGGAAAACCGGCTGGGAAACCCCCCGGGCCCCCCCATCCTCAAAGG
AAAACTGAAAAAATTCCCCGTTCCACCCCTCGGGGGGAAAAAGCGGGGAG
GGCCAAACCCCCGGGGGTGGGGTGGGCCGGGTTTGTAATTAAGAACCCCC
CTGGGGGGGGTATGGGGGCCAGGGGGAAAAAAATCAAACCCACCCAAAAA
ACCCCCCCTGTTTCTCCGGGGGAAAAAATTTTTCCCCCCCCGCGCGGGAA
AAATCTAGAAAAAAAAAAAGATTTCTCTTCGAAACCAACCCCGCGATTTT
AATTTTGATCCCCGATTATTTCTCCAAGAAG
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