EY675271
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675271 vs. ExPASy Swiss-Prot
Match: UPL3_ARATH (E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana GN=UPL3 PE=1 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 7.054e-69 Identity = 146/250 (58.40%), Postives = 169/250 (67.60%), Query Frame = 1 Query: 4 LQELHVIICRKQHLESMTSDNCEEAVDLRFRGAPIEDLCLDFTLPGYPDYILKPGDENVDINNLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAESPAIVNLLEIMGEFTPDQQRAFCQFVTGCTSSFNRVGWRC*IQSLPLSKSISSPAP*YSIKREPGPSESAE*KTCPMAMDCWQFP*TLPLSLTRGNFLPKKRVYAINQGAGVF 753 LQEL V++ RK +LE + DN DL RG IEDL L+FTLPGYP+YIL+ GDE VDI NLEEYISLVVDATVK G+ RQ+EAFR+GFNQVFDITSLQIFTP ELD+LLCGRRELWE LAEHIKFDHGY A+SPAI+NLLEIMGE T DQQRAFCQFVTG G L + + SS + + G SE+A+ P M C + P S + KK +YAIN+G G F Sbjct: 1642 LQELRVVVARKHYLEGVGGDNSSTISDLCLRGCRIEDLSLEFTLPGYPEYILRSGDEIVDITNLEEYISLVVDATVKRGVTRQIEAFRSGFNQVFDITSLQIFTPSELDYLLCGRRELWEVETLAEHIKFDHGYNAKSPAIINLLEIMGELTADQQRAFCQFVTG-APRLPPGGLAVLNPKLTIVRKHSSTSS--AAANGAGASETAD-DDLPSVMTCANYLKLPPYSTK--EIMYKKLLYAINEGQGSF 1885
BLAST of EY675271 vs. ExPASy Swiss-Prot
Match: UPL4_ARATH (E3 ubiquitin-protein ligase UPL4 OS=Arabidopsis thaliana GN=UPL4 PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 4.309e-42 Identity = 107/252 (42.46%), Postives = 145/252 (57.54%), Query Frame = 1 Query: 4 LQELHVIICRKQHLESMTSDNCEEAVDLRFRGAPIEDLCLDFTLPGYPDYILKPGDEN--VDINNLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAESPAIVNLLEIMGEFTPDQQRAFCQFVTGCTSSFNRVGWRC*IQSLPLSKSISSPAP*YSIKREPGPSESAE*KTCPMAMDCWQFP*TLPLSLTRGNFLPKKRVYAINQGAGVF 753 L EL ++ RK+ D+ DL F G IEDLCL+F LPGY DY L P N V+++NLEEYI +V+ATV GI +Q+EAFR+GFNQVF I L+IF EL+ +LCG +L+ + +HIKFDHGYT+ SP + LL+I+ EF +QQRAF QFVTG LP ++S +P +I R+ G S+S++ P M C + P S + +K +YAI +G G F Sbjct: 1266 LVELQALVRRKKLFAEAHGDSGAAKCDLSFHGTKIEDLCLEFALPGYTDYDLAPYSANDMVNLDNLEEYIKGIVNATVCNGIQKQVEAFRSGFNQVFSIEHLRIFNEEELETMLCGECDLFSMNEVLDHIKFDHGYTSSSPPVEYLLQILHEFDREQQRAFLQFVTGS-------------PRLP-HGGLASLSPKLTIVRKHG-SDSSD-TDLPSVMTCANYLKLPPYSSKEK--MKEKLIYAITEGQGSF 1499
BLAST of EY675271 vs. ExPASy Swiss-Prot
Match: TRIPC_HUMAN (Probable E3 ubiquitin-protein ligase TRIP12 OS=Homo sapiens GN=TRIP12 PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 2.551e-32 Identity = 76/169 (44.97%), Postives = 106/169 (62.72%), Query Frame = 1 Query: 13 LHVIICRKQHLE---SMTSDNCEEAVD-LRFRGAPIEDLCLDFTLPGYPDYILKPGDEN--VDINNLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCG-RRELWEPAALAEHIKFDHGYTAESPAIVNLLEIMGEFTPDQQRAFCQFVTG 498 L I+ +K+ LE S T ++ + A++ L G +EDL LDFTLPG+P+ LK G ++ V I+NLEEY+ LV+ + G+ RQ ++FR GF VF ++ LQ F P ELD LLCG + + W+ L E + DHGYT +S A+ L EI+ F +QQR F QFVTG Sbjct: 1752 LEDIVRQKKRLEQDKSQTKESLQYALETLTMNGCSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNEGVSRQFDSFRDGFESVFPLSHLQYFYPEELDQLLCGSKADTWDAKTLMECCRPDHGYTHDSRAVKFLFEILSSFDNEQQRLFLQFVTG 1920 HSP 2 Score: 23.483 bits (49), Expect = 2.551e-32 Identity = 10/17 (58.82%), Postives = 11/17 (64.71%), Query Frame = 3 Query: 519 GGLAVLNPKLTFVKKHF 569 GG LNP LT V+K F Sbjct: 1927 GGFRSLNPPLTIVRKTF 1943
BLAST of EY675271 vs. ExPASy Swiss-Prot
Match: YDE1_SCHPO (Probable ubiquitin fusion degradation protein C12B10.01c OS=Schizosaccharomyces pombe GN=SPAC12B10.01c PE=2 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 3.936e-26 Identity = 61/133 (45.86%), Postives = 81/133 (60.90%), Query Frame = 1 Query: 106 IEDLCLDFTLPGYPDYILKPGDENVDIN--NLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAESPAIVNLLEIMGEFTPDQQRAFCQFVTG 498 +EDL LDFTLPG+P L P + + N+ +Y++ V+D TV G+ +Q+EAF+ GF+ VF TSLQ+ T HEL L E W A L + I DHGYT ESP I LL +M + +QR F QF+TG Sbjct: 1443 LEDLHLDFTLPGFPSIELIPDGASTPVTTFNVSDYLNYVIDYTVGKGVQQQLEAFQNGFSSVFPYTSLQVLTEHELVTLFGTVDEDWSYATLMKSIVADHGYTMESPTIQRLLTLMSQMNFQEQRDFLQFITG 1575 HSP 2 Score: 21.9422 bits (45), Expect = 3.936e-26 Identity = 9/15 (60.00%), Postives = 11/15 (73.33%), Query Frame = 3 Query: 519 GGLAVLNPKLTFVKK 563 GG A LNP LT V++ Sbjct: 1582 GGFAGLNPPLTVVRR 1596
BLAST of EY675271 vs. ExPASy Swiss-Prot
Match: HECD1_HUMAN (E3 ubiquitin-protein ligase HECTD1 OS=Homo sapiens GN=HECTD1 PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 1.464e-21 Identity = 52/143 (36.36%), Postives = 82/143 (57.34%), Query Frame = 1 Query: 106 IEDLCLDFT------LPGYPDYILKPG--DENVDINNLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRE-LWEPAALAEHIKFDHGYTAESPAIVNLLEIMGEFTPDQQRAFCQFVTGCTS 507 IEDL L+F + G+ LKP DE + ++N EEY+ L+ D + TGI +QMEAFR GFN+VF + L F+ E+ +LCG + W + + + GYT +SP + + ++ + D+++AF QF TGC++ Sbjct: 2407 IEDLGLNFQFCPSSRIYGFTAVDLKPSGEDEMITMDNAEEYVDLMFDFCMHTGIQKQMEAFRDGFNKVFPMEKLSSFSHEEVQMILCGNQSPSWAAEDIINYTEPKLGYTRDSPGFLRFVRVLCGMSSDERKAFLQFTTGCST 2549 HSP 2 Score: 26.5646 bits (57), Expect = 1.464e-21 Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = 3 Query: 516 PGGLAVLNPKLTFVKK 563 PGGLA L+P+LT V+K Sbjct: 2552 PGGLANLHPRLTVVRK 2567
BLAST of EY675271 vs. ExPASy Swiss-Prot
Match: UFD4_YEAST (Ubiquitin fusion degradation protein 4 OS=Saccharomyces cerevisiae GN=UFD4 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 2.154e-17 Identity = 67/218 (30.73%), Postives = 101/218 (46.33%), Query Frame = 1 Query: 106 IEDLCLDFTLPGYPDYILKPGDENVDIN--NLEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQIFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAESPAIVNLLEIMGEFTPDQQRAFCQFVTGCTSSFNRVGWRC*IQSLPLSKSISSPAP*YSIKREPGPSESAE*KTCPMAMDCWQFP*TLPLSLTRGNFLPKKRVYAINQGAGVF 753 +E L L FT+PG D L PG N +N N+EEYI V+D + GI +Q++AF GF++VF + I P EL + E W A L ++ +HGYT +S I + + I+ F ++R F QF+TG LP+ S P +++ + + P M C + LP T + + + AI +GAG F Sbjct: 1279 LESLSLTFTVPGNDDIELIPGGCNKSLNSSNVEEYIHGVIDQILGKGIEKQLKAFIEGFSKVFSYERMLILFPDELVDIFGRVEEDWSMATLYTNLNAEHGYTMDSSIIHDFISIISAFGKHERRLFLQFLTGS-------------PKLPIG-GFKSLNPKFTVVLKHAEDGLTADEYLPSVMTCANYL-KLP-KYTSKDIMRSRLCQAIEEGAGAF 1480
BLAST of EY675271 vs. ExPASy Swiss-Prot
Match: UBE3A_HUMAN (Ubiquitin-protein ligase E3A OS=Homo sapiens GN=UBE3A PE=1 SV=4) HSP 1 Score: 75.8702 bits (185), Expect = 4.203e-13 Identity = 50/147 (34.01%), Postives = 80/147 (54.42%), Query Frame = 1 Query: 85 LRFRGAPIEDLCLDFTLP-----GYPD-YILKPGDENVDINN--LEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQ-IFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAESPAIVNLLEIMGEFTPDQQRAFCQFVTG 498 L + G +D+ + F + G P Y LK + + I N +E+++L D + + +Q +AFR GF+ V + + L+ +F P E++ L+CG R L + AL E ++D GYT +S I EI+ FT +Q+R F QF TG Sbjct: 666 LEYEGNVEDDMMITFQISQTDLFGNPMMYDLKENGDKIPITNENRKEFVNLYSDYILNKSVEKQFKAFRRGFHMVTNESPLKYLFRPEEIELLICGSRNL-DFQALEETTEYDGGYTRDSVLIREFWEIVHSFTDEQKRLFLQFTTG 811
BLAST of EY675271 vs. ExPASy Swiss-Prot
Match: UBE3A_MOUSE (Ubiquitin-protein ligase E3A OS=Mus musculus GN=Ube3a PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.647e-12 Identity = 49/147 (33.33%), Postives = 78/147 (53.06%), Query Frame = 1 Query: 85 LRFRGAPIEDLCLDFTLP-----GYPD-YILKPGDENVDINN--LEEYISLVVDATVKTGIMRQMEAFRAGFNQVFDITSLQ-IFTPHELDHLLCGRRELWEPAALAEHIKFDHGYTAESPAIVNLLEIMGEFTPDQQRAFCQFVTG 498 L + G+ +D+ + F + G P Y LK + + I N +E++ D + + +Q +AFR GF+ V + + L+ +F P E++ L+CG R L + AL E ++D GYT ES I EI+ FT +Q+R F F TG Sbjct: 676 LEYEGSVEDDMMITFQISQTDLFGNPMMYDLKENGDKIPITNENRKEFVISYSDYILNKSVEKQFKAFRRGFHMVTNESPLKYLFRPEEIELLICGSRNL-DFQALEETTEYDGGYTRESVVIREFWEIVHSFTDEQKRLFLLFTTG 821 The following BLAST results are available for this feature:
BLAST of EY675271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY675271 ID=EY675271; Name=EY675271; organism=Citrus sinensis; type=EST; length=1001bpback to top |