EY675257

Overview
NameEY675257
Unique NameEY675257
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length335
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8529 contig Csv1_Contig8529:1..335. BLAST: Citrus Unigene V1 Contigs to Trembl
Homology
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BLAST of EY675257 vs. ExPASy Swiss-Prot
Match: Y607_HAEIN (Shikimate 5-dehydrogenase-like protein HI0607 OS=Haemophilus influenzae GN=HI0607 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.531e-16
Identity = 48/99 (48.48%), Postives = 58/99 (58.59%), Query Frame = 3 
Query:   36 LRGSGGTAKAVASALRDGGYAKGVIVARNEVAGRALAQSLGYEWQAQLGALRPQMLVNVTPIGMTGGAEADQLAFEADAIDAAETVFDVVAIPSETPLI 332
            + GSGG AKAV +A ++ G+ K  I ARN   G+ LA   GY +   L   +  +LVNVT IGM GG E   LAF    ID A   FDVVA+P ETP I
Sbjct:  124 VHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLENQQADILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVAMPVETPFI 222
The following BLAST results are available for this feature:
BLAST of EY675257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y607_HAEIN4.531e-1648.48Shikimate 5-dehydrogenase-like protein HI0607 OS=H... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-008-C05-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675257 ID=EY675257; Name=EY675257; organism=Citrus sinensis; type=EST; length=335bp
GTAACGTGTCCGGGATTCCCGGGTCGACTTTCGCCCTGCGCGGCAGCGGT
GGTACCGCTAAGGCGGTGGCCAGTGCGTTGCGCGATGGCGGTTATGCCAA
GGGCGTGATTGTGGCGCGTAATGAAGTGGCGGGCCGGGCACTGGCCCAGA
GCCTGGGGTATGAGTGGCAGGCGCAGTTGGGTGCCTTGCGCCCGCAGATG
CTTGTCAACGTGACGCCGATTGGCATGACCGGAGGGGCGGAAGCAGATCA
GTTGGCGTTTGAGGCTGATGCCATTGATGCGGCCGAGACCGTATTCGATG
TGGTGGCGATTCCCTCGGAAACGCCGCTGATCCTG
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