EY675185

Overview
NameEY675185
Unique NameEY675185
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1013
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675185 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1)

HSP 1 Score: 343.199 bits (879), Expect = 1.122e-94
Identity = 170/205 (82.93%), Postives = 175/205 (85.37%), Query Frame = 3
Query:    6 RPVKSAPHSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGPSGYVLHVLDSFVQAIVTGKGSIENL 620
            R VKSAP SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQSILAIWA QVVLMGFVEGYR+                AFDPLGLADDPD FAELKVKELKNG    +  +   FVQAIVTGKG IENL
Sbjct:   37 RTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLA-MFSMFGFFVQAIVTGKGPIENL 240          

HSP 2 Score: 26.1794 bits (56), Expect = 1.122e-94
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 2
Query:  629 HIADPGANNAW 661
            H+ADP ANNAW
Sbjct:  243 HVADPVANNAW 253          
BLAST of EY675185 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1)

HSP 1 Score: 343.199 bits (879), Expect = 1.122e-94
Identity = 170/205 (82.93%), Postives = 175/205 (85.37%), Query Frame = 3
Query:    6 RPVKSAPHSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGPSGYVLHVLDSFVQAIVTGKGSIENL 620
            R VKSAP SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQSILAIWA QVVLMGFVEGYR+                AFDPLGLADDPD FAELKVKELKNG    +  +   FVQAIVTGKG IENL
Sbjct:   37 RTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLA-MFSMFGFFVQAIVTGKGPIENL 240          

HSP 2 Score: 26.1794 bits (56), Expect = 1.122e-94
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 2
Query:  629 HIADPGANNAW 661
            H+ADP ANNAW
Sbjct:  243 HVADPVANNAW 253          
BLAST of EY675185 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2)

HSP 1 Score: 340.502 bits (872), Expect = 9.409e-94
Identity = 168/205 (81.95%), Postives = 174/205 (84.88%), Query Frame = 3
Query:    6 RPVKSAPHSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGPSGYVLHVLDSFVQAIVTGKGSIENL 620
            R VKSAP SIWYGPDRPKYLGPFS+Q PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEILSKNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR+                AFDPLGLADDPD FAELKVKE+KNG    +  +   FVQAIVTGKG IENL
Sbjct:   39 RTVKSAPTSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKNGRLA-MFSMFGFFVQAIVTGKGPIENL 242          

HSP 2 Score: 25.7942 bits (55), Expect = 9.409e-94
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 2
Query:  629 HIADPGANNAW 661
            H+ADP ANNAW
Sbjct:  245 HLADPVANNAW 255          
BLAST of EY675185 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1)

HSP 1 Score: 338.576 bits (867), Expect = 3.510e-92
Identity = 166/205 (80.98%), Postives = 174/205 (84.88%), Query Frame = 3
Query:    6 RPVKSAPHSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGPSGYVLHVLDSFVQAIVTGKGSIENL 620
            R VKSAP SIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPEILSKNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNL+HAQSILAIWACQVVLMGFVEGYR+                AFDPLGLADDP+ FAELKVKE+KNG    +  +   FVQAIVTGKG IENL
Sbjct:   39 RTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLA-MFSMFGFFVQAIVTGKGPIENL 242          
BLAST of EY675185 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1)

HSP 1 Score: 334.339 bits (856), Expect = 5.075e-92
Identity = 164/205 (80.00%), Postives = 172/205 (83.90%), Query Frame = 3
Query:    6 RPVKSAPHSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGPSGYVLHVLDSFVQAIVTGKGSIENL 620
            R VKSAP SIWYGPDRPKYLGPFSEQ PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGC FPE+L KNGVKFGEAVWFKAG+QIF+EGGLDYLGNPNLIHAQSILAIWA QVVLMGFVEGYR+                AFDPLGLADDPD FAELKVKELKNG    +  +   FVQAIVTGKG I+NL
Sbjct:   39 RTVKSAPESIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDSFAELKVKELKNGRLA-MFSMFGFFVQAIVTGKGPIQNL 242          

HSP 2 Score: 26.1794 bits (56), Expect = 5.075e-92
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 2
Query:  629 HIADPGANNAW 661
            H+ADP ANNAW
Sbjct:  245 HVADPVANNAW 255          
BLAST of EY675185 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 1.127e-91
Identity = 165/205 (80.49%), Postives = 172/205 (83.90%), Query Frame = 3
Query:    6 RPVKSAPHSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGPSGYVLHVLDSFVQAIVTGKGSIENL 620
            R VKSAP SIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPEILSKNGV FGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMGFVEGYR+                AFDPLGLADDP+ FAELKVKE+KNG    +  +   FVQAIVTGKG IENL
Sbjct:   39 RTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLA-MFSMFGFFVQAIVTGKGPIENL 242          

HSP 2 Score: 26.1794 bits (56), Expect = 1.127e-91
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 2
Query:  629 HIADPGANNAW 661
            H+ADP ANNAW
Sbjct:  245 HVADPVANNAW 255          
BLAST of EY675185 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1)

HSP 1 Score: 332.028 bits (850), Expect = 2.502e-91
Identity = 163/205 (79.51%), Postives = 172/205 (83.90%), Query Frame = 3
Query:    6 RPVKSAPHSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGPSGYVLHVLDSFVQAIVTGKGSIENL 620
            R VKSAP SIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPEILSKNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQSILA+WA QVVLMG +EGYR+                AFDPLGLADDP+ FAELKVKE+KNG    +  +   FVQAIVTGKG IENL
Sbjct:   39 RTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLA-MFSMFGFFVQAIVTGKGPIENL 242          

HSP 2 Score: 26.1794 bits (56), Expect = 2.502e-91
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 2
Query:  629 HIADPGANNAW 661
            H+ADP ANNAW
Sbjct:  245 HVADPVANNAW 255          
BLAST of EY675185 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.926e-90
Identity = 165/205 (80.49%), Postives = 172/205 (83.90%), Query Frame = 3
Query:    6 RPVKSAPHSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGPSGYVLHVLDSFVQAIVTGKGSIENL 620
            R VKSAP SIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPEILSKNGV FGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMGFVEGYR+                AFDPLGLADDP+ FAELKVKE+KNG    +  +   FVQAIVTGKG IENL
Sbjct:   11 RTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLA-MFSMFGFFVQAIVTGKGPIENL 214          
BLAST of EY675185 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1)

HSP 1 Score: 326.25 bits (835), Expect = 1.760e-89
Identity = 159/205 (77.56%), Postives = 170/205 (82.93%), Query Frame = 3
Query:    6 RPVKSAPHSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGPSGYVLHVLDSFVQAIVTGKGSIENL 620
            R V+SAP SIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWDTA +SADPETFAKNRELEVIH RWAMLGALGCVFPE+L+KNG+KFGEAVWFKAGAQIFSEGGLDY GNPNLIHAQSILAIWACQVVLMG +EGYR+                AFDPLGLADDP+  AELKVKE+KNG    +  +   FVQAIVTGKG IENL
Sbjct:   40 RTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDPLLPGGAFDPLGLADDPEACAELKVKEIKNGRLA-MFSMFGFFVQAIVTGKGPIENL 243          

HSP 2 Score: 25.7942 bits (55), Expect = 1.760e-89
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 2
Query:  629 HIADPGANNAW 661
            H+ADP ANNAW
Sbjct:  246 HLADPVANNAW 256          
BLAST of EY675185 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1)

HSP 1 Score: 329.331 bits (843), Expect = 2.129e-89
Identity = 160/205 (78.05%), Postives = 172/205 (83.90%), Query Frame = 3
Query:    6 RPVKSAPHSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGPSGYVLHVLDSFVQAIVTGKGSIENL 620
            R VK+ P SIWYG DRPK+LGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC+FPE+LSKNGV+FGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQSILAIWA QVVLMG +EGYR+                AFDPLGLADDP+ FAELKVKE+KNG    +  +   FVQAIVTGKG IENL
Sbjct:   38 RTVKAVPQSIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLA-MFSMFGFFVQAIVTGKGPIENL 241          
The following BLAST results are available for this feature:
BLAST of EY675185 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 76
Match NameE-valueIdentityDescription
CB23_ORYSJ1.122e-9482.93Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB23_ORYSI1.122e-9482.93Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB21_GOSHI9.409e-9481.95Chlorophyll a-b binding protein 151, chloroplastic... [more]
CB24_SOLLC3.510e-9280.98Chlorophyll a-b binding protein 4, chloroplastic O... [more]
CB215_PEA5.075e-9280.00Chlorophyll a-b binding protein 215, chloroplastic... [more]
CB26_PETSP1.127e-9180.49Chlorophyll a-b binding protein 37, chloroplastic ... [more]
CB23_TOBAC2.502e-9179.51Chlorophyll a-b binding protein 36, chloroplastic ... [more]
CB25_SOLLC1.926e-9080.49Chlorophyll a-b binding protein 5, chloroplastic (... [more]
CB21_PINTH1.760e-8977.56Chlorophyll a-b binding protein type I, chloroplas... [more]
CB21_LEMGI2.129e-8978.05Chlorophyll a-b binding protein of LHCII type I, c... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-007-C05-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675185 ID=EY675185; Name=EY675185; organism=Citrus sinensis; type=EST; length=1013bp
CCACGCGTCCGGTCAAATCCGCTCCCCACAGCATCTGGTACGGCCCAGAC
CGCCCAAAGTACTTGGGACCATTCTCTGAGCAAACACCATCATACTTGAC
TGGTGAGTTCCCTGGTGACTATGGCTGGGATACCGCTGGTTTATCAGCAG
ACCCCGAGACATTTGCTAAGAACCGTGAGCTAGAGGTGATCCACAGCAGA
TGGGCAATGCTTGGAGCTCTTGGCTGCGTCTTCCCTGAAATCCTCTCCAA
GAATGGAGTGAAGTTCGGCGAAGCAGTTTGGTTCAAGGCTGGCGCTCAAA
TATTCTCTGAAGGTGGCCTTGACTATCTTGGCAACCCCAACCTCATTCAT
GCTCAGAGCATTTTGGCTATCTGGGCCTGCCAGGTTGTGCTTATGGGTTT
TGTTGAAGGATACAGAATTGGTGGCGGTCCTCTTGGTGAAGGACTTGACC
CACTTTACCCTGGTGGTGCTTTTGACCCACTTGGTTTGGCTGATGACCCC
GATCAATTTGCTGAGTTGAAGGTCAAGGAGCTCAAGAATGGGCCGTCTGG
CTATGTTCTCCATGTTTTGGATTCTTTTGTTCAGGCTATTGTCACTGGGA
AGGGGTCAATTGAAAACCTCCTACGACCCACATTGCTGATCCTGGGGCCA
ACAATGCCTGGGGCCTTATCCCCCTAACTTTTGTTTCCCGGAAAAATAAA
AAAAAACCCCATGATTTGGAATGGGGGCCTTTTTTCCGCCTGTAACTTTA
TTCTATGGTTCCATAGGGGGTTTTTGGGGAAAACTCGTGCCGGGGAATGT
TTTTAAATACCTCCTGATGGGTTACCCTTTGAAAAGGGCTACGCCTCCGG
AATTTTTTTATTTTATAAAAAAAAAAAAAAAAAGAGGGGGGGGCCCCCCC
CTAAAAAGAGAGACACAAATTATAAAATAAACCGCAGTGGGACGAGGAAA
AAGAACACAATAAACAACCCCTCCTCGAAATAAAGGGGGGGCCACCCGCC
TATGATATTTTCC
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