EY675176

Overview
NameEY675176
Unique NameEY675176
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1097
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675176 vs. ExPASy Swiss-Prot
Match: FLGK_SALTY (Flagellar hook-associated protein 1 OS=Salmonella typhimurium GN=flgK PE=1 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 3.299e-30
Identity = 67/161 (41.61%), Postives = 101/161 (62.73%), Query Frame = -3
Query:   31 NWHWGGLNASQAGLATTGHNINNATTVGYNRQRVMISTAGAQATSNGFIGRGVQVDTVVRSYDSFLYKQLVGAQGSSAQLQTQFDQISQVNNLFADRTVGIAPGLSNFFTSMNTVASKPADPAARQDLLGKANSLTTQIRSAYQEMQNQRMGLNTQISTTV 513
            N    GLNA+QA L T  +NINN    GY RQ  +++ A +   + G+IG GV V  V R YD+F+  QL GAQ  S+ L T+++Q+S+++NL AD++  ++  L +FFTS+ T+ S   DPAARQ L+GKA  L  Q ++  Q +++Q   +N  I ++V
Sbjct:    6 NHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGGWIGNGVYVSGVQREYDAFITNQLRGAQNQSSGLTTRYEQMSKIDNLLADKSSSLSGSLQSFFTSLQTLVSNAEDPAARQALIGKAEGLVNQFKTTDQYLRDQDKQVNIAIGSSV 166          
BLAST of EY675176 vs. ExPASy Swiss-Prot
Match: FLGK_SALTI (Flagellar hook-associated protein 1 OS=Salmonella typhi GN=flgK PE=3 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 3.299e-30
Identity = 67/161 (41.61%), Postives = 101/161 (62.73%), Query Frame = -3
Query:   31 NWHWGGLNASQAGLATTGHNINNATTVGYNRQRVMISTAGAQATSNGFIGRGVQVDTVVRSYDSFLYKQLVGAQGSSAQLQTQFDQISQVNNLFADRTVGIAPGLSNFFTSMNTVASKPADPAARQDLLGKANSLTTQIRSAYQEMQNQRMGLNTQISTTV 513
            N    GLNA+QA L T  +NINN    GY RQ  +++ A +   + G+IG GV V  V R YD+F+  QL GAQ  S+ L T+++Q+S+++NL AD++  ++  L +FFTS+ T+ S   DPAARQ L+GKA  L  Q ++  Q +++Q   +N  I ++V
Sbjct:    6 NHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGGWIGNGVYVSGVQREYDAFITNQLRGAQNQSSGLTTRYEQMSKIDNLLADKSSSLSGSLQSFFTSLQTLVSNAEDPAARQALIGKAEGLVNQFKTTDQYLRDQDKQVNIAIGSSV 166          
BLAST of EY675176 vs. ExPASy Swiss-Prot
Match: FLGK_ECOLI (Flagellar hook-associated protein 1 OS=Escherichia coli (strain K12) GN=flgK PE=1 SV=3)

HSP 1 Score: 119.398 bits (298), Expect = 3.774e-26
Identity = 59/157 (37.58%), Postives = 96/157 (61.15%), Query Frame = -3
Query:   28 GLNASQAGLATTGHNINNATTVGYNRQRVMISTAGAQATSNGFIGRGVQVDTVVRSYDSFLYKQLVGAQGSSAQLQTQFDQISQVNNLFADRTVGIAPGLSNFFTSMNTVASKPADPAARQDLLGKANSLTTQIRSAYQEMQNQRMGLNTQISTTVD 498
            GLNA+QA L T  +NI++    GY RQ  +++ A +   + G++G GV V  V R YD+F+  QL  AQ  S+ L  +++Q+S+++N+ +  T  +A  + +FFTS+ T+ S   DPAARQ L+GK+  L  Q ++  Q +++Q   +N  I  +VD
Sbjct:   11 GLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYVSGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQMQDFFTSLQTLVSNAEDPAARQALIGKSEGLVNQFKTTDQYLRDQDKQVNIAIGASVD 167          
The following BLAST results are available for this feature:
BLAST of EY675176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
FLGK_SALTY3.299e-3041.61Flagellar hook-associated protein 1 OS=Salmonella ... [more]
FLGK_SALTI3.299e-3041.61Flagellar hook-associated protein 1 OS=Salmonella ... [more]
FLGK_ECOLI3.774e-2637.58Flagellar hook-associated protein 1 OS=Escherichia... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-007-B07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675176 ID=EY675176; Name=EY675176; organism=Citrus sinensis; type=EST; length=1097bp
CGGCAAGTACGGGGTCGGGAATTCCGGGTCGACGGTGGTCGAGATCTGCG
TGTTCAGGCCCATGCGCTGGTTCTGCATTTCCTGGTAGGCCGAGCGGATC
TGGGTGGTCAGGCTGTTGGCCTTGCCCAGCAAGTCCTGGCGCGCGGCCGG
ATCGGCCGGCTTGCTGGCCACGGTATTCATGCTGGTGAAGAAGTTCGACA
GGCCCGGGGCGATGCCCACGGTGCGGTCGGCGAACAGGTTGTTGACCTGG
GAGATCTGGTCGAACTGGGTCTGCAGCTGGGCGCTGCTGCCTTGCGCGCC
GACCAGCTGCTTGTACAGGAAGCTGTCGTAGCTGCGCACCACGGTGTCCA
CCTGGACGCCGCGGCCGATGAAGCCATTGCTGGTCGCCTGGGCGCCGGCG
GTCGAGATCATGACGCGCTGACGGTTGTAACCGACCGTGGTGGCATTGTT
GATGTTGTGGCCGGTGGTCGCCAGGCCCGCCTGGGACGCGTTCAGCCCGC
CCCAATGCCAATTTGTACAGATTTCTTGCTGACAATGCCCCCGTATGTAA
CCGCGACTGAAATTTCTGGGATTACCCGATTAACGGCAGCAGGTAATCCA
AATTTTAGAGTCCTTTCCAACATCTGACCCGAAATAATCAACCTTGGGGG
GGGGCCCCCCCCACCTGGGCTCATGAACCCCAATTCAAATTTCTGGCGCT
AACTTGCGAATGGGGGGGGGTAACCCGGAAAACTCTGGGGATGGCGGGGG
GGGGGCCCTCAATTCTGTTTGCCCCCCCGGGGGTCACCGCCTTCCTTATA
CGGGGAAATGGGGGCCAAAATGGAGGGGGGGGGGTGTTATTCGGGGCAAA
GAAATTCCCCCCTCTAAGAAAAAAAAAAAAAGGCCCCGGAAAAGGGGTTG
CGCCTCACCCTTTTTTTCCACCCAAACCCCCCCTCTCTTCCGTTTTACTT
GGGGGGGGACACACACCATTTTTATAATAAAACACCCTCGCCCCCATTTC
CACCCCGCGGGGGGGGCGGCCCCACCCTCTTGTATGTATCTCCCCCCAGA
TAATAGAGGGTGTGTTTTTTTTTAAAGTGTGTGTGGGGTGGGGCGCG
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