EY675168

Overview
NameEY675168
Unique NameEY675168
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1001
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675168 vs. ExPASy Swiss-Prot
Match: XTH6_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 6.848e-56
Identity = 95/122 (77.87%), Postives = 105/122 (86.07%), Query Frame = 2
Query:    2 VPIRVYKNSG--RAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECLA 361
            VPIR YKN+      +P +QPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYY+DFDIEGCPVPGP  C SNP NWWE   YQ+L A+EARRYRWVR+NHM+YDYCTD+SR+PVPPPEC A
Sbjct:  171 VPIREYKNNEAKNIAYPTSQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYKDFDIEGCPVPGPTFCPSNPHNWWEGYAYQSLNAVEARRYRWVRVNHMVYDYCTDRSRFPVPPPECRA 292          
BLAST of EY675168 vs. ExPASy Swiss-Prot
Match: XTH7_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2)

HSP 1 Score: 217.624 bits (553), Expect = 8.944e-56
Identity = 93/124 (75.00%), Postives = 108/124 (87.10%), Query Frame = 2
Query:    2 VPIRVYKNSG--RAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECLAGI 367
            VPIRVYKN+   + P+P  QPMGVYSTLWEADDWATRGG+EKI+WS+APFYAYY+DFDIEGCPVPGPA+C +N  NWWE + Y  L+ +EAR YRWVR+NHM+YDYCTDKSR+PVPPPEC AGI
Sbjct:  170 VPIRVYKNNEARKVPYPRFQPMGVYSTLWEADDWATRGGIEKINWSRAPFYAYYKDFDIEGCPVPGPADCPANSKNWWEGSAYHQLSPVEARSYRWVRVNHMVYDYCTDKSRFPVPPPECSAGI 293          
BLAST of EY675168 vs. ExPASy Swiss-Prot
Match: XTH1_SOLLC (Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.907e-35
Identity = 66/123 (53.66%), Postives = 83/123 (67.48%), Query Frame = 2
Query:    2 VPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN---CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 355
            VPIR +KNS      FP NQPM +YS+LW+ADDWATRGGLEK +W+ APF A Y  F ++GC    P     C +    WW+   +Q L A++ RR RWVR  + +Y+YCTDK+RYPVPPPEC
Sbjct:  168 VPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTNWANAPFTASYTSFHVDGCEAATPQEVQVCNTKGMKWWDQKAFQDLDALQYRRLRWVRQKYTVYNYCTDKARYPVPPPEC 290          
BLAST of EY675168 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.939e-34
Identity = 66/121 (54.55%), Postives = 82/121 (67.77%), Query Frame = 2
Query:    2 VPIRVYKNSGRA--PFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 355
            VPIRV+KNS      FP NQPM +YS+LW ADDWATRGGLEK +W KAPF A YR F ++GC     A  C +    WW+   +Q L A + +R +WVR  + IY+YCTD+ R+PVPPPEC
Sbjct:  167 VPIRVFKNSKDVGVKFPFNQPMKIYSSLWNADDWATRGGLEKTNWEKAPFVASYRGFHVDGCEASVNAKFCETQGKRWWDQKEFQDLDANQYKRLKWVRKRYTIYNYCTDRVRFPVPPPEC 287          
BLAST of EY675168 vs. ExPASy Swiss-Prot
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 4.319e-34
Identity = 66/123 (53.66%), Postives = 80/123 (65.04%), Query Frame = 2
Query:    2 VPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN---CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 355
            VPIR +KNS      FP NQPM +YS+LW+ADDWATRGGLEK DWS APF A Y  F ++GC    P     C +    WW+   +Q L A++ RR RWVR  + IY+YCTD+ RYP  PPEC
Sbjct:  167 VPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTDWSNAPFTASYTSFHVDGCEAATPQEVQVCNTKGMRWWDQKAFQDLDALQYRRLRWVRQKYTIYNYCTDRKRYPTLPPEC 289          
BLAST of EY675168 vs. ExPASy Swiss-Prot
Match: XTHB_PHAAN (Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis GN=XTHB PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 8.146e-33
Identity = 63/121 (52.07%), Postives = 81/121 (66.94%), Query Frame = 2
Query:    2 VPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 355
            +PIRV+KN       FP NQPM VY++LW ADDWATRGGLEK DWSKAPF A Y+ F ++GC     +  CA+    WW+   ++ L + + RR +WVR    IY+YCTD++RYP  PPEC
Sbjct:  167 IPIRVFKNLKELGVKFPFNQPMKVYNSLWNADDWATRGGLEKTDWSKAPFVAEYKGFHVDGCEASVNSRFCATQGKRWWDQTEFRDLDSFQWRRLKWVRQKFTIYNYCTDRTRYPQLPPEC 287          
BLAST of EY675168 vs. ExPASy Swiss-Prot
Match: XTH_BRAOB (Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.064e-32
Identity = 64/121 (52.89%), Postives = 83/121 (68.60%), Query Frame = 2
Query:    2 VPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 355
            +PIRV+KN+      FP NQPM +YS+LW ADDWATRGGLEK +W+ APF A YR F I+GC     A  CA+    WW+ N ++ L A + RR +WVR+   IY+YCTD++R+PV P EC
Sbjct:  169 IPIRVFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFIASYRGFHIDGCQASVEAKYCATQGRMWWDQNEFRDLDAEQYRRLKWVRMKWTIYNYCTDRTRFPVMPAEC 289          
BLAST of EY675168 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 4.043e-32
Identity = 66/122 (54.10%), Postives = 81/122 (66.39%), Query Frame = 2
Query:    2 VPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYP-VPPPEC 355
            VPIRV+KNS      FP +QPM +Y++LW ADDWATRGGLEK DWSKAPF A Y+ F I+GC     A  C +    WW+   ++ L A + RR RWVR  + IY+YCTD  RYP + PPEC
Sbjct:  168 VPIRVFKNSKDLGVKFPFDQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIAAYKGFHIDGCEASVNAKFCDTQGKRWWDQPEFRDLDAAQWRRLRWVRQKYTIYNYCTDTKRYPHISPPEC 289          
BLAST of EY675168 vs. ExPASy Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 6.896e-32
Identity = 64/120 (53.33%), Postives = 76/120 (63.33%), Query Frame = 2
Query:    5 PIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 355
            PIRV+KNS      +P +QPM +YS+LW ADDWATRGG EK DWSKAPF A YR F ++GC     A  CA+    WW+   +Q L A + RR  WVR  H IY+YCTD  RY    PEC
Sbjct:  168 PIRVFKNSKDLGVRYPFDQPMKLYSSLWNADDWATRGGREKTDWSKAPFVASYRGFHVDGCEASAEAKFCATQGARWWDQPEFQDLDAAQYRRLAWVRKEHTIYNYCTDHDRYAAMAPEC 287          
BLAST of EY675168 vs. ExPASy Swiss-Prot
Match: XTH4_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana GN=XTH4 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 4.470e-31
Identity = 61/121 (50.41%), Postives = 81/121 (66.94%), Query Frame = 2
Query:    2 VPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 355
            +PIR +KN+      FP NQPM +YS+LW ADDWATRGGLEK +W+ APF A Y+ F I+GC     A  CA+    WW+   ++ L A + RR +WVR+   IY+YCTD++R+PV P EC
Sbjct:  170 IPIRTFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFVASYKGFHIDGCQASVEAKYCATQGRMWWDQKEFRDLDAEQWRRLKWVRMKWTIYNYCTDRTRFPVMPAEC 290          
The following BLAST results are available for this feature:
BLAST of EY675168 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
XTH6_ARATH6.848e-5677.87Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH7_ARATH8.944e-5675.00Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH1_SOLLC3.907e-3553.66Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH5_ARATH1.939e-3454.55Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_TOBAC4.319e-3453.66Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHB_PHAAN8.146e-3352.07Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_BRAOB1.064e-3252.89Xyloglucan endotransglucosylase/hydrolase OS=Brass... [more]
XTH_SOYBN4.043e-3254.10Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_WHEAT6.896e-3253.33Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH4_ARATH4.470e-3150.41Xyloglucan endotransglucosylase/hydrolase protein ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-007-A09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675168 ID=EY675168; Name=EY675168; organism=Citrus sinensis; type=EST; length=1001bp
TGTGCCCATCAGGGTTTACAAAAACAGTGGAAGGGCTCCATTTCCAATGA
ACCAACCCATGGGGGTGTATTCGACGCTGTGGGAAGCAGATGACTGGGCA
ACAAGAGGTGGTCTAGAGAAAATAGATTGGAGCAAAGCTCCTTTTTATGC
TTATTACAGAGACTTTGATATTGAGGGCTGCCCAGTTCCTGGACCAGCAA
ACTGTGCCTCGAACCCAGGTAACTGGTGGGAGGCAAATAATTATCAAGCC
CTCACCGCCATGGAAGCAAGAAGATACAGATGGGTTCGTCTCAACCACAT
GATCTATGATTATTGCACTGATAAATCAAGATACCCAGTACCCCCACCGG
AATGCCTTGCCGGCATATAAATTCAACCCGCCAATTAATTAAGCAGTTGG
ACGGTACTCCATATCCGTATCATATCATGTATATTACTTCACGTACACGT
CCTTTGTATTATTCCCTATTCGTGTGAAAAGACTTATACGCATATCAAGG
GAGGGGCAGGAGGGAAAATAAACATTGTGTGCTTTTAAATGTGATTATGG
GAGTGGGAAATATGTGGGGTATCTGCTCCGCTTGTACCATATATAAGTCT
GAATTTGATGCACAGTATTCTGTGCCAATAAAAGCCTCTTCTTAATTGTG
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAAN
NAAAAAAAAAAGANAAAGAAAAAAAAAAAAANNNANGAAAAAGAAAAAAN
AAAAANGGGGGGGGGGGGCCCCCCCAAAAGGAAACCACATTTTTCCACCC
CCGGGGGCGGGGGCCGCCCCCCATCCCTTCTTCTTTGTGGGGCCCCCAAT
AATTTTTTTTTTCCCGGGGGGCCGCGTTTTTTTATAAACCCCCGGGGGGG
GGGGGGGGGAGAAAAAACCCGTGGGGGGTTTTCCCCCCCAAAATATTATT
ATCTCCCCCTCTTTGGGGTGCCCAACCCCCCCCCCCCCCCTCTTTTTTTG
T
back to top