EY675159

Overview
NameEY675159
Unique NameEY675159
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1105
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675159 vs. ExPASy Swiss-Prot
Match: MGTE_THET8 (Magnesium transporter mgtE OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=TTHA1060 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.030e-19
Identity = 62/216 (28.70%), Postives = 106/216 (49.07%), Query Frame = -2
Query:   25 LDDLHSADVAYILEALPLNDRLTLWQLVKADRDGDILLEVSDSVRETLIADMDDHELLAAAKDMDADELADLASELPRD---VVHELMETLDAQQRERVRSALSYDEEQVGALMDFEMVTIREDVSLEVVLRYLRRLKELPGHTDKLFVVDYEGILKGVLPIKRLLVNDPDKKVADVMASDPVSFHPDEDAYDAAQAFERYDLISAPVVDPGIRTV 663
            L+++H  D+  + + L    R  +  L+   +  ++L  +S   +   +  +    L    +++  D+LAD    + ++       L + LD + R  V +   Y+E++ G LM  E V +RE +++E VLR+LRR          ++VVD +G LKGVL ++ L+V DP  +VA++M    V    D D  + A+    YD    PVVD   R V
Sbjct:   25 LEEIHPQDLLALWDELKGEHRYVVLTLLPKAKAAEVLSHLSPEEQAEYLKTLPPWRLREILEELSLDDLADALQAVRKEDPAYFQRLKDLLDPRTRAEVEALARYEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVADPRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLV 240          
BLAST of EY675159 vs. ExPASy Swiss-Prot
Match: MGTE_BACSU (Magnesium transporter mgtE OS=Bacillus subtilis GN=mgtE PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 6.532e-18
Identity = 51/214 (23.83%), Postives = 111/214 (51.87%), Query Frame = -2
Query:   43 LSSFKARLDDLHSADVAYILEALPLNDRLTLWQLVKADRDGDILLEVSDSVRETLIADMDDHELLAAAKDMDADELADLASELPRDVVHELMETLDAQQRERVRSALSYDEEQVGALMDFEMVTIREDVSLEVVLRYLRRLKELPGHTDKLFVVDYEGILKGVLPIKRLLVNDPDKKVADVMASDPVSFHPDEDAYDAAQAFERYDLISAPVVD 684
            +  F++ +D+L   D+A+I + +P   R      +  D   D++ E+    +  ++  +   +   A   MD D+LA L  E+  ++  +L+ +++A + + V+  ++Y  +  G +M    V I +  +++  +  L+   E+    + L+V++    L GVL  + L++ +P++KV D+M +  +S    +D  + A+  ERYD ++ PVV+
Sbjct:   23 IRDFRSVIDELQPYDMAFIFKEMPEKHRARYLSYLTVDDITDMIGELEREFQLVVLNKVGKTKATLAMNKMDNDDLAQLLEEMDEELKEQLLSSMEASESKAVQLLMNYPADSAGRMMTNRYVWIPQHYTVKDAVVKLKSFAEIAESINYLYVINESKQLVGVLSYRDLILGEPEEKVQDLMFTRVISADALQDQEEVARLIERYDFLAIPVVE 236          
BLAST of EY675159 vs. ExPASy Swiss-Prot
Match: MGTE_ENTFA (Magnesium transporter mgtE OS=Enterococcus faecalis GN=mgtE PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.744e-16
Identity = 53/218 (24.31%), Postives = 102/218 (46.79%), Query Frame = -2
Query:   43 QTLSSFKARLDDLHSADVAYILEALPLNDRLTLWQLVKADRDGDI--LLEVSDSVRETLIADMDDHELLAAAKDMDADELADLASELPRDVVHELMETLDAQQRERVRSALSYDEEQVGALMDFEMVTIREDVSLEVVLRYLRRLKELPGHTDKLFVVDYEGILKGVLPIKRLLVNDPDKKVADVMASDPVSFHPDEDAYDAAQAFERYDLISAPVVD 690
            Q ++ F+     LH  +     ++L   DR  L+  +      D+  ++E  +   +  +A+M          +M  D   DL + L +    + +  L +++   ++  L Y++E  GA+M  E V+I  + ++   +  L+   ++      ++VVD E  L GV+ ++ L+VND D  +AD++    +S H  +D  D AQ    YD ++ PV D
Sbjct:   21 QQMNEFRELFLALHIYEQGQFYQSLDEKDRQHLYNYLSPKELADMFDVIEEDNENMKDYLAEMRPSYAADMLAEMYTDNAVDLLNMLDKSQKAKYLSLLSSEEAGEIKELLHYEDETAGAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVNDDDTLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTD 238          
The following BLAST results are available for this feature:
BLAST of EY675159 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
MGTE_THET82.030e-1928.70Magnesium transporter mgtE OS=Thermus thermophilus... [more]
MGTE_BACSU6.532e-1823.83Magnesium transporter mgtE OS=Bacillus subtilis GN... [more]
MGTE_ENTFA2.744e-1624.31Magnesium transporter mgtE OS=Enterococcus faecali... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-006-H11-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675159 ID=EY675159; Name=EY675159; organism=Citrus sinensis; type=EST; length=1105bp
TAAGGGTATTTTGGGGCGCTGCAGTACGGTCCGGATTCCCGGGTCGACCA
CCGGGGCCGAGATCAAGTCATAACGCTCGAACGCCTGGGCAGCGTCGTAA
GCGTCTTCGTCCGGATGGAAACTCACCGGGTCGCTGGCCATGACGTCCGC
GACTTTCTTGTCCGGGTCATTGACCAGCAGGCGCTTGATCGGCAGCACGC
CCTTGAGAATGCCTTCGTAATCGACCACGAACAGTTTGTCGGTGTGGCCT
GGCAGCTCCTTGAGGCGGCGCAGGTAACGCAGAACCACTTCCAGGCTGAC
GTCTTCGCGGATGGTGACCATCTCGAAGTCCATCAACGCACCGACCTGCT
CCTCGTCGTAGGACAACGCCGAGCGCACACGCTCACGCTGTTGGGCGTCG
AGGGTTTCCATCAGCTCATGGACGACGTCACGCGGCAGCTCGGAAGCCAG
GTCAGCGAGTTCGTCGGCATCCATGTCCTTGGCGGCAGCCAGGAGCTCGT
GATCGTCCATGTCGGCGATCAGGGTTTCACGGACCGAGTCGGATACTTCA
AGGAGGATGTCGCCGTCGCGATCAGCCTTGACCAATTGCCAAAGCGTCAA
ACGGTCATTAAGCGGCAAGGCTTCGAGGATGTAAGCAACGTCGGCAGAAT
GCAAATCATCGAGCCTGGCTTTGAAGCTCGACAAGGTTTGGCCGGGGGGA
CAAGGTTTCTCCACCCGGCCATGATTCCCGCCCTTCCGGGCAAGCCGTCC
AAATTTTCAACCAACCCCCGGGGCCCTCCAGCCCCCCTCAAAAAATGAGG
CCCGGGAAATCCCGGAGGCTTTTTTTGGGGTTTTTTTTTAACTTTCAATT
TTCCGGGAAAAGGGGGAAAAACCCCCCACCCCCCCCCCCCGGGGGGGCCC
CGCCGGGAAGGGGACAACAACCCAACCAATTTCCTGGGGAAGGGGGTAAA
AAAAGGGGGGGAGTCGAGGAATAAAAAACTAACGGGGGGGAAAAAGACCC
ACCCTGGGGGGGGGGGGGTTTTCCCACACAAAAAGCACCCCGCCTGCGGG
GGGGGGGGGGGGGGGTGTGAAAAAAGAGAGGGGGGGGGGGCAGGCTGCCA
CAAGA
back to top