EY656642
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB2_AQUAE (Tryptophan synthase beta chain 2 OS=Aquifex aeolicus GN=trpB2 PE=3 SV=1) HSP 1 Score: 327.791 bits (839), Expect = 5.455e-89 Identity = 162/269 (60.22%), Postives = 199/269 (73.98%), Query Frame = 2 Query: 8 SALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNADTKYCLGSVLNHVLLHQTVIGEECIKQMEAVGETPDIIIGCTGGGSNFGGLSFPFIREKLNG---KINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIADTIR*ALRCKELEKQRL 805 SAL+F+ F L C V+ VR SY+QKPYRR++M+TW +V PSPS T AGRK + +P PGSLGIAISEA E AA+ DTKY LGSVLNHVLLHQTVIG E KQME G PD+IIG GGGSNF GLSFPF+ + L G K + + AVEP A P+LTKG Y YDFGD+ G+TPL+KM+TLGHDF+P PIHAGGLRYHG APL+ +Y L ++A++ QTE F+ A+ FARTEGI+PA E+ HAI I AL+CKE ++++ Sbjct: 140 SALSFATQFFDLQCRVYMVRVSYNQKPYRRILMETWKGEVIPSPSPYTNAGRKYYEENPEHPGSLGIAISEAIEEAASREDTKYSLGSVLNHVLLHQTVIGLEAKKQMEEAGYYPDVIIGAVGGGSNFAGLSFPFLADVLRGDKRKEDLKVLAVEPEACPTLTKGEYKYDFGDSVGLTPLIKMYTLGHDFVPSPIHAGGLRYHGDAPLVCKLYNLGYIDAVAYKQTEVFEAAVTFARTEGIVPAPESAHAIKAAIDEALKCKETGEEKV 408
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB2_METMA (Tryptophan synthase beta chain 2 OS=Methanosarcina mazei GN=trpB2 PE=3 SV=1) HSP 1 Score: 320.087 bits (819), Expect = 1.137e-86 Identity = 159/266 (59.77%), Postives = 197/266 (74.06%), Query Frame = 2 Query: 8 SALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNADTKYCLGSVLNHVLLHQTVIGEECIKQMEAVGETPDIIIGCTGGGSNFGGLSFPFIREKLNGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIADTIR*ALRCKELEKQRL 805 SAL+ +C+ F L C+V+ VR+SY QKPYR+ +M WG V PSPS TE GRKIL+ P +PGSLGIAISEA E A + +TKY LGSVLNHV+LHQTVIG EC KQ+E V E PD++IGC GGGSN GG+ FI+++L GK N + AVEP+A PSLTKG Y YDFGDTA MTPL+KM+TLGH IP IHAGGLRYHG +P++S + LMEA+S Q E F A+QFARTEGI+PA E++HAI I AL K+ ++++ Sbjct: 152 SALSLACNYFDLECKVYMVRSSYYQKPYRKSLMTLWGGNVVPSPSPDTEFGRKILKEQPDTPGSLGIAISEAVEDAIAHDNTKYTLGSVLNHVVLHQTVIGAECKKQLEQVEEYPDVVIGCCGGGSNLGGIGLEFIKDRLEGKHNARVVAVEPSACPSLTKGEYRYDFGDTAEMTPLLKMYTLGHKHIPPAIHAGGLRYHGDSPIISKLCAEGLMEAVSYGQKEVFDAAVQFARTEGIVPAPESSHAIRCAIDEALEAKQKGEEKV 417
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB2_ARCFU (Tryptophan synthase beta chain 2 OS=Archaeoglobus fulgidus GN=trpB2 PE=3 SV=1) HSP 1 Score: 314.309 bits (804), Expect = 6.241e-85 Identity = 156/266 (58.65%), Postives = 196/266 (73.68%), Query Frame = 2 Query: 8 SALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNADTKYCLGSVLNHVLLHQTVIGEECIKQMEAVGETPDIIIGCTGGGSNFGGLSFPFIREKLNGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIADTIR*ALRCKELEKQRL 805 SAL F+ LF + C V+ V+ S+ QKPYRR+MM+TWG +V PSPSD TE GRKIL +P +PGSLGIAISEA E AA N +TKY LGSVLNHVLLHQTVIG E Q+E V E PD++IGC GGGSNF GL++PF+ + NG + I AVEP A P+LT G Y YDFGD AG+TPL+KM+TLGHDFIP PIHAGGLRYHG AP L + + +++A ++ Q F+ + FARTEGIIPA ET HA+ I A++ +E ++++ Sbjct: 145 SALCFATKLFEMACTVYMVKVSFMQKPYRRVMMETWGGEVIPSPSDRTEVGRKILAENPDTPGSLGIAISEAIEDAAKNENTKYSLGSVLNHVLLHQTVIGLETKAQLEKVDEKPDVLIGCVGGGSNFAGLTYPFVNDAKNGDLE--IIAVEPAACPTLTAGEYKYDFGDVAGLTPLLKMYTLGHDFIPPPIHAGGLRYHGDAPTLCMLVKHGVIKARAVKQLPTFEAGLLFARTEGIIPAPETNHAVRAAIDEAIKARENNEEKV 408
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB2_METAC (Tryptophan synthase beta chain 2 OS=Methanosarcina acetivorans GN=trpB2 PE=3 SV=1) HSP 1 Score: 313.153 bits (801), Expect = 1.390e-84 Identity = 154/265 (58.11%), Postives = 195/265 (73.58%), Query Frame = 2 Query: 8 SALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNADTKYCLGSVLNHVLLHQTVIGEECIKQMEAVGETPDIIIGCTGGGSNFGGLSFPFIREKLNGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIADTIR*ALRCKELEKQR 802 SAL+ +C+ F L C+V+ VR+S+ QKPYR+ ++ WG V PSPS TE GRKILQ P +PGSLGIAISEA E A + +TKY LGSVLNHV+LHQTVIG EC +Q+ V E PD++IGC GGGSN GG+ FI+++L GK + + AVEP+A PSLTKG Y YDFGDTA MTPL+KM+TLGH +P IHAGGLRYHG +P++S + LMEA+S Q E F A+QFARTEGI+PA E++HAI I AL K+ +++ Sbjct: 152 SALSLACNYFDLECKVYMVRSSFYQKPYRKSLITLWGGNVVPSPSPDTEFGRKILQEQPDTPGSLGIAISEAVEDAIAHENTKYSLGSVLNHVVLHQTVIGAECKQQLAQVEEYPDVVIGCCGGGSNLGGIGLEFIKDRLEGKHSARVVAVEPSACPSLTKGEYRYDFGDTAEMTPLLKMYTLGHKHVPPAIHAGGLRYHGDSPIISKLCSEGLMEAVSYDQQEVFDAAVQFARTEGIVPAPESSHAIRCAIDEALAAKQTGEEK 416
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB2_METTH (Tryptophan synthase beta chain 2 OS=Methanobacterium thermoautotrophicum GN=trpB2 PE=3 SV=1) HSP 1 Score: 310.457 bits (794), Expect = 9.012e-84 Identity = 147/265 (55.47%), Postives = 198/265 (74.72%), Query Frame = 2 Query: 8 SALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNADTKYCLGSVLNHVLLHQTVIGEECIKQMEAVGETPDIIIGCTGGGSNFGGLSFPFIREKLNGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIADTIR*ALRCKELEKQR 802 +AL+ +CSL L C+V+ VR S++QKP+R+ +MQ +G +V PSPS+ TE GR++L+ DP PGSLGIAISEA E A + Y LGSVLNHVLLHQTVIG E KQ+E GETPDI+IGC GGGSNFGG FPF+++KL+GK++ A EP + P+LT G Y YDFGDTAGMTPL+KM+TLGHDF+P +HAGGLRYHGM+P ++ + ++ A ++PQ F+ ++FA+ EG++PA ET HAI+ I A +C+E +++ Sbjct: 140 TALSLACSLMDLQCKVYMVRVSFNQKPFRKTIMQLYGGEVVPSPSNHTEFGRRMLKEDPEHPGSLGIAISEAMEEALQEENVYYSLGSVLNHVLLHQTVIGLETKKQLEIAGETPDIMIGCVGGGSNFGGAIFPFVKDKLDGKLDCEFIAAEPKSCPTLTAGEYRYDFGDTAGMTPLLKMYTLGHDFVPPSVHAGGLRYHGMSPQVALLVREGVINARAVPQHTIFESGVKFAKAEGVVPAPETCHAISVAIDEARKCRETGEEK 404
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB2_THEMA (Tryptophan synthase beta chain 2 OS=Thermotoga maritima GN=trpB2 PE=3 SV=1) HSP 1 Score: 308.145 bits (788), Expect = 4.473e-83 Identity = 158/266 (59.40%), Postives = 197/266 (74.06%), Query Frame = 2 Query: 8 SALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNADTKYCLGSVLNHVLLHQTVIGEECIKQMEAVGETPDIIIGCTGGGSNFGGLSFPFIREKLNGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIADTIR*ALRCKELEKQRL 805 SAL+++ + FGL +V+ V+ SY QKP R+ MM +G KV PSPS+ T GRKIL DP +PGSLGIAISEA EVA ++ +TKY LGSVLNHVLLHQTVIG E KQ+E +GE PDI++GC GGGSNFGG PF+ +KL+G+ + A EP A PSLTKG Y YDFGDTAG+TPL+KM+TLG DFIP IHAGGLRYHG AP+++ + + L+EA + Q E F+ A FA+ EGIIPA E+ HAIA IR A + KE K+R+ Sbjct: 141 SALSYAGAKFGLEVKVFMVKVSYQQKPMRKYMMNLFGGKVTPSPSEETNFGRKILSEDPDNPGSLGIAISEALEVAVSDPNTKYSLGSVLNHVLLHQTVIGLEIKKQLELIGEKPDILLGCHGGGSNFGGTILPFVPDKLSGRDIRFV-ACEPAACPSLTKGNYDYDFGDTAGLTPLLKMYTLGKDFIPPKIHAGGLRYHGSAPIIARLVKEGLVEAQAFDQDETFEAAKIFAKLEGIIPAPESAHAIAGAIREAKKAKEEGKERV 405
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB_THEGJ (Tryptophan synthase beta chain OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=trpB PE=3 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 3.918e-79 Identity = 148/260 (56.92%), Postives = 187/260 (71.92%), Query Frame = 2 Query: 8 SALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNADTKYCLGSVLNHVLLHQTVIGEECIKQMEAVGETPDIIIGCTGGGSNFGGLSFPFIREKLNGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIADTIR*ALRCKE 787 +AL+ + +L GL V+ RASY QKPYR+ +M+ +GA+++PSPSD TE GRK L DP+ PG LGIAISEA E + +Y LGSVLNHVL+HQTVIG E +QM+ E PD+IIGC GGGSNF GL++PF+R+ L+GK + AVEP A PS+T+GVY YDFGD+ G TP MKMHTLGH + PIHAGGLRYHG+AP LS + +++ ++ QTE FQ A FA+TEGIIPA E+ HAI I AL+ KE Sbjct: 140 TALSLAGALLGLKIRVYMARASYQQKPYRKTIMRLYGAEIYPSPSDRTEIGRKFLSEDPNHPGGLGIAISEAIEDVLKDEKARYALGSVLNHVLMHQTVIGLEAQEQMKEF-EEPDVIIGCVGGGSNFAGLAYPFVRDVLSGKADYEFIAVEPKAAPSMTRGVYKYDFGDSGGYTPKMKMHTLGHTYYVPPIHAGGLRYHGLAPTLSILINHGIVKPVAYHQTEVFQAAELFAKTEGIIPAPESAHAIKGVIDRALKAKE 398
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB_THEON (Tryptophan synthase beta chain OS=Thermococcus onnurineus (strain NA1) GN=trpB PE=3 SV=1) HSP 1 Score: 293.123 bits (749), Expect = 1.489e-78 Identity = 143/266 (53.76%), Postives = 192/266 (72.18%), Query Frame = 2 Query: 8 SALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNADTKYCLGSVLNHVLLHQTVIGEECIKQMEAVGETPDIIIGCTGGGSNFGGLSFPFIREKLNGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIADTIR*ALRCKELEKQRL 805 +AL+ + +L G+N V+ RAS+ QKPYR+ +M+ +GA+++PSPSD TE GRK L DP+ PG LGIAISEA E + +Y LGSVLNHVL+HQTVIG E +QM+ E PD+IIGC GGGSNF GL++PF++++L+GK + AVEP A PS+T+GVY YD+GD+ G+TP MKMHTLGH + PIHAGGLRYHG+AP LS + ++ ++ QTE F+ A FA+TEGI+PA E+ HA+ I AL+ KE K+ + Sbjct: 140 TALSLAGALMGINVRVYMARASFYQKPYRKTIMRLYGAEIYPSPSDRTEIGRKFLSEDPNHPGGLGIAISEAIEDVLRDEKARYALGSVLNHVLMHQTVIGLEAKEQMKEF-EDPDVIIGCVGGGSNFAGLAYPFVKDRLDGKADYEFIAVEPRAAPSMTRGVYTYDYGDSGGLTPKMKMHTLGHTYYVPPIHAGGLRYHGLAPTLSILINHGIVRPVAYHQTEVFEAARLFAKTEGIVPAPESAHAVKAAIDRALKAKEEGKEEV 404
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB_THELT (Tryptophan synthase beta chain OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=trpB PE=3 SV=1) HSP 1 Score: 292.352 bits (747), Expect = 2.540e-78 Identity = 149/260 (57.31%), Postives = 190/260 (73.08%), Query Frame = 2 Query: 8 SALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAEVAATNADTKYCLGSVLNHVLLHQTVIGEECIKQMEAVGETPDIIIGCTGGGSNFGGLSFPFIREKLNGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIADTIR*ALRCKE 787 SAL +S + FGL V+ V+ SY+QKP R+ +M+ + V PSPS+ T G+ IL + +PGSLGIAISEA E+ +++ TKY LGSVLNHVLLHQTVIG E KQ+E +GE PD+I+GC GGGSNFGG PFI +KL+GK + A EPTA PSLT+G Y YD+GDTAGMTPL+KM+TLG DFIP IHAGGLRYHG AP++S + + L+EA++ Q E F A FA+ EGI+PA E+++AIA IR A + KE Sbjct: 141 SALCYSGAKFGLKVNVFMVKISYEQKPMRKYLMRLFDGDVVPSPSEKTSFGKSILASNSENPGSLGIAISEAIEITLSDSRTKYSLGSVLNHVLLHQTVIGLELKKQLEVLGEKPDVILGCHGGGSNFGGTVLPFIPDKLSGKEIKFV-ACEPTACPSLTRGRYDYDYGDTAGMTPLLKMYTLGKDFIPPKIHAGGLRYHGAAPIISRLVKEGLIEAVAFDQDEIFSAAKLFAKLEGIVPAPESSYAIAGAIREAKKAKE 399
BLAST of EY656642 vs. ExPASy Swiss-Prot
Match: TRPB_DESK1 (Tryptophan synthase beta chain OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=trpB PE=3 SV=1) HSP 1 Score: 290.041 bits (741), Expect = 1.260e-77 Identity = 146/259 (56.37%), Postives = 190/259 (73.36%), Query Frame = 2 Query: 8 SALAFSCSLFGLNCEVWQVRASYDQKPYRRLMMQTWGAKVHPSPSDITEAGRKILQMDPSSPGSLGIAISEAAE-VAATNADTKYCLGSVLNHVLLHQTVIGEECIKQMEAVG-ETPDIIIGCTGGGSNFGGLSFPFIREKLNGKINPVIRAVEPTAWPSLTKGVYAYDFGDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLLSHVYELXLMEAISIPQTECFQCAIQFARTEGIIPAAETTHAIADTIR*ALR 778 SAL+ + +++GL V+ VRASY QKPYRR++M+ +GA+V+PSPS T GRK+L +P PGSLGIAISEA E V + KY LGSVLNHVLLHQ+VIG E IKQ+E +G E D +IGC GGGSNF GLS+PFI N PV AVEP PS+T+G Y YD+GDTAG+TPL+KM+TLGHD+IP PI+AGGLRYHG+AP LS + + +++ ++ PQ E + + FART+GI+PA E++HA+ I AL+ Sbjct: 141 SALSLAGNIYGLKVRVFMVRASYLQKPYRRILMEAYGAEVYPSPSTKTNTGRKLLAENPDHPGSLGIAISEAIEDVVLSGGRAKYSLGSVLNHVLLHQSVIGLEAIKQLELLGVERVDYVIGCVGGGSNFAGLSYPFIGYNYNNGEPPVFIAVEPETVPSMTRGEYRYDYGDTAGLTPLLKMYTLGHDYIPPPIYAGGLRYHGVAPSLSILVKNNIVKPVAYPQDEVLEAGLVFARTQGILPAPESSHAVKAVIDVALK 399 The following BLAST results are available for this feature:
BLAST of EY656642 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 296
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY656642 ID=EY656642; Name=EY656642; organism=Citrus sinensis; type=EST; length=929bpback to top |