EY675141

Overview
NameEY675141
Unique NameEY675141
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1048
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675141 vs. ExPASy Swiss-Prot
Match: IDH_AZOVI (Isocitrate dehydrogenase [NADP] OS=Azotobacter vinelandii GN=icd PE=1 SV=5)

HSP 1 Score: 294.278 bits (752), Expect = 8.007e-79
Identity = 151/200 (75.50%), Postives = 161/200 (80.50%), Query Frame = 1
Query:   55 RTPKGLDTISVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQLVEENFLRWDSLGEFLALAASLEHLGVNYNNPKALVLSKTLDQATGQFLDNNKSPSRKVGNIDNRGSHFXXXXXXXXXXXXXTEDTALQAQFGELAKTLTANEATIVAELNAVQGKPVDIGGYYPPNAQLTSKAMRPN 654
            R  +G DTISVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLM+GGGLFETGAGGSAPKHVQQ +EE +LRWDSLGEFLALAASLEHLG  Y NPKALVL+ TLDQATG+ LDNNKSP+RKVG IDNRGSHF             TED  LQAQF  +AK LT NE  IV EL A QGKPVDI GYY PN  LTSKA+RP+
Sbjct:  531 RIREGKDTISVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMSGGGLFETGAGGSAPKHVQQFLEEGYLRWDSLGEFLALAASLEHLGNAYKNPKALVLASTLDQATGKILDNNKSPARKVGEIDNRGSHFYLALYWAQALAAQTEDKELQAQFTGIAKALTDNETKIVGELAAAQGKPVDIAGYYHPNTDLTSKAIRPS 730          
BLAST of EY675141 vs. ExPASy Swiss-Prot
Match: IDH2_COLMA (Isocitrate dehydrogenase [NADP] 2 OS=Colwellia maris GN=icd2 PE=1 SV=3)

HSP 1 Score: 266.544 bits (680), Expect = 1.788e-70
Identity = 136/200 (68.00%), Postives = 151/200 (75.50%), Query Frame = 1
Query:   55 RTPKGLDTISVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQLVEENFLRWDSLGEFLALAASLEHLGVNYNNPKALVLSKTLDQATGQFLDNNKSPSRKVGNIDNRGSHFXXXXXXXXXXXXXTEDTALQAQFGELAKTLTANEATIVAELNAVQGKPVDIGGYYPPNAQLTSKAMRPN 654
            R  KG D ISVTGNVLRDYLTDLFPI+ELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQ  +EN LRWDSLGEFLALAASLEH+ V   N +A +L+ TLD ATG+FLD NKSPSRKVG +DNRGSHF             T DT LQA F  +A+ LT  E  IVAELNA QG  +D+ GYY  + +L  KAMRP+
Sbjct:  533 RVAKGEDAISVTGNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQFEKENHLRWDSLGEFLALAASLEHVAVTTGNARAQILADTLDAATGKFLDTNKSPSRKVGELDNRGSHFYLAMYWAQALAAQTTDTELQASFSSVAQALTKQEEKIVAELNAAQGPAIDLNGYYFADTKLAEKAMRPS 732          
BLAST of EY675141 vs. ExPASy Swiss-Prot
Match: IDH_COREF (Isocitrate dehydrogenase [NADP] OS=Corynebacterium efficiens GN=icd PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 1.162e-61
Identity = 126/200 (63.00%), Postives = 141/200 (70.50%), Query Frame = 1
Query:   52 ERTPKGLDTISVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQLVEENFLRWDSLGEFLALAASLEHLGVNYNNPKALVLSKTLDQATGQFLDNNKSPSRKVGNIDNRGSHFXXXXXXXXXXXXXTEDTALQAQFGELAKTLTANEATIVAELNAVQGKPVDIGGYYPPNAQLTSKAMRP 651
            +R  +G DTISVTGNVLRDY TDLFPI+ELGTSAKMLS+VPLM GGGLFETGAGGSAPKHVQQ++EEN LRWDSLGEFLALA S  H     NN KA VL+  LD+AT + L+  KSPSRKVG IDNRGSHF             TED  L   F  +A+ L    A I A L   QGKPVD+GGYY P+ + TS  MRP
Sbjct:  517 DRIRRGEDTISVTGNVLRDYNTDLFPILELGTSAKMLSVVPLMAGGGLFETGAGGSAPKHVQQVIEENHLRWDSLGEFLALAESFRHELNTRNNTKAGVLADALDRATEKLLNEEKSPSRKVGEIDNRGSHFWLATYWADELANQTEDAELAETFAPVAEALNNQAADIDAALIGEQGKPVDLGGYYAPSDEKTSAIMRP 716          
BLAST of EY675141 vs. ExPASy Swiss-Prot
Match: IDH_CORGL (Isocitrate dehydrogenase [NADP] OS=Corynebacterium glutamicum GN=icd PE=1 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.677e-60
Identity = 125/200 (62.50%), Postives = 139/200 (69.50%), Query Frame = 1
Query:   52 ERTPKGLDTISVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQLVEENFLRWDSLGEFLALAASLEHLGVNYNNPKALVLSKTLDQATGQFLDNNKSPSRKVGNIDNRGSHFXXXXXXXXXXXXXTEDTALQAQFGELAKTLTANEATIVAELNAVQGKPVDIGGYYPPNAQLTSKAMRP 651
            +R  +G DTISVTGNVLRDY TDLFPI+ELGTSAKMLS+VPLM GGGLFETGAGGSAPKHVQQ+ EEN LRWDSLGEFLALA S  H   N  N KA VL+  LD+AT + L+  KSPSRKVG IDNRGSHF             TED  L A F  +A+ L    A I A L AVQG   D+GGYY PN +  +  MRP
Sbjct:  526 DRIRRGEDTISVTGNVLRDYNTDLFPILELGTSAKMLSVVPLMAGGGLFETGAGGSAPKHVQQVQEENHLRWDSLGEFLALAESFRHELNNNGNTKAGVLADALDKATEKLLNEEKSPSRKVGEIDNRGSHFWLTKFWADELAAQTEDADLAATFAPVAEALNTGAADIDAALLAVQGGATDLGGYYSPNEEKLTNIMRP 725          
The following BLAST results are available for this feature:
BLAST of EY675141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
IDH_AZOVI8.007e-7975.50Isocitrate dehydrogenase [NADP] OS=Azotobacter vin... [more]
IDH2_COLMA1.788e-7068.00Isocitrate dehydrogenase [NADP] 2 OS=Colwellia mar... [more]
IDH_COREF1.162e-6163.00Isocitrate dehydrogenase [NADP] OS=Corynebacterium... [more]
IDH_CORGL1.677e-6062.50Isocitrate dehydrogenase [NADP] OS=Corynebacterium... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-006-F06-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675141 ID=EY675141; Name=EY675141; organism=Citrus sinensis; type=EST; length=1048bp
CCAGGATACGTGTCCCGGATTCCCGGGTCGACGCGATGAAGTTCACCCTG
GGAGCGCACCCCCAAGGGCCTGGACACCATCTCGGTGACCGGCAACGTAT
TGCGCGACTACCTGACTGACCTGTTCCCGATCATGGAACTGGGCACCAGC
GCCAAGATGCTGTCGATCGTGCCACTGATGAACGGTGGCGGCCTGTTCGA
AACCGGTGCCGGCGGTTCGGCTCCGAAGCACGTACAGCAACTGGTTGAAG
AAAACTTCCTGCGCTGGGATTCCCTGGGCGAGTTCCTGGCCCTGGCCGCG
TCCCTCGAGCATTTGGGTGTGAACTACAACAACCCGAAAGCCCTGGTGCT
GTCCAAGACCCTGGACCAGGCCACCGGCCAGTTCCTCGACAACAACAAGT
CACCATCGCGCAAAGTCGGCAACATCGACAACCGCGGCAGCCACTTCTAC
CTGGCTCTGTACTGGGCTCAAGCCCTGGCCGCCCAGACGGAAGACACTGC
ACTGCAAGCGCAGTTTGGCGAACTGGCCAAGACCCTGACCGCGAACGAAG
CAACCATCGTTGCCGAGCTCAACGCCGTTCAGGGCAAGCCAGTGGACATC
GGTGGCTACTACCCACCGAACGCCCAACTGACCAGCAAGGCCATGCGCCC
AAACCGCCACCCTCAACGCCGGCAATCCCTGCGCTGGTGGTAAGGGTTGT
AGGGATGCAAAAAAACCCCGGCCCCTGGGCCGGGGGTTTCTGGTTTCTGG
GAATTGAACGTTTTTATTTAAAAAAACCCCCATCAAAAAGGGGGGGGAAA
ATATAATTTTACCCNTTATCTTCTTTTCTATAAATACACATATACTTCAT
TGCTCCAAAATAATTTTGAACAAACTATTAATATTAAAATCAGAAATNAC
TCTATTTCCAAAGAACATCAGTTATGTTATAGACGAAACAAAATATAATT
TTCAAATATAGATGCTATACACAAATAGAGCACGAATTAATCAACAAAAA
TACATCGGCGTTATGGACATACGGAATACGTTTCAACTTAGTAGACAT
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