EY675137

Overview
NameEY675137
Unique NameEY675137
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1003
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY675137_ssr43 microsatellite EY675137_ssr43:43..52. BLAST: Citrus ESTs to Prunus persica proteins V1
EY675137_ssr98 microsatellite EY675137_ssr98:98..112. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY675137 vs. ExPASy Swiss-Prot
Match: VA726_ARATH (Putative vesicle-associated membrane protein 726 OS=Arabidopsis thaliana GN=VAMP726 PE=2 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 9.697e-51
Identity = 87/111 (78.38%), Postives = 98/111 (88.29%), Query Frame = 1
Query:  139 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFG 471
            M Q+SLIY+FVARG V+LAEYTEF GNF S+A QCLQKLP+SNNKFTYNCD HTFNYL DNG+TYCVV  ES+GRQIPMAFLERVK++F  +YGGGKA+TA AN LNKEFG
Sbjct:    1 MGQQSLIYSFVARGTVILAEYTEFKGNFTSVAAQCLQKLPSSNNKFTYNCDGHTFNYLADNGFTYCVVVIESAGRQIPMAFLERVKEDFNKRYGGGKASTAKANSLNKEFG 111          

HSP 2 Score: 33.8834 bits (76), Expect = 9.697e-51
Identity = 21/47 (44.68%), Postives = 27/47 (57.45%), Query Frame = 3
Query:  561 KLKELMQYCVESLEENSKLGKGKGSGFRSQRG*EGKKLKRV*KRGEK 701
            KLKE MQYC +  EE SKL K K       +G   + +++V  RGEK
Sbjct:  113 KLKEHMQYCADHPEEISKLSKVKAQ-VTEVKGVMMENIEKVLDRGEK 158          
BLAST of EY675137 vs. ExPASy Swiss-Prot
Match: VA722_ARATH (Vesicle-associated membrane protein 722 OS=Arabidopsis thaliana GN=VAMP722 PE=2 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 6.200e-50
Identity = 86/111 (77.48%), Postives = 100/111 (90.09%), Query Frame = 1
Query:  139 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFG 471
            M+Q+SLIY+FVARG V+L E+T+F GNF SIA QCLQKLP+SNNKFTYNCD HTFNYLV+NG+TYCVVA +S+GRQIPMAFLERVK++F  +YGGGKAATA AN LNKEFG
Sbjct:    1 MAQQSLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVENGFTYCVVAVDSAGRQIPMAFLERVKEDFNKRYGGGKAATAQANSLNKEFG 111          

HSP 2 Score: 33.113 bits (74), Expect = 6.200e-50
Identity = 20/47 (42.55%), Postives = 28/47 (59.57%), Query Frame = 3
Query:  561 KLKELMQYCVESLEENSKLGKGKGSGFRSQRG*EGKKLKRV*KRGEK 701
            KLKE MQYC++  +E SKL K K       +G   + +++V  RGEK
Sbjct:  113 KLKEHMQYCMDHPDEISKLAKVKAQ-VSEVKGVMMENIEKVLDRGEK 158          
BLAST of EY675137 vs. ExPASy Swiss-Prot
Match: VA725_ARATH (Vesicle-associated membrane protein 725 OS=Arabidopsis thaliana GN=VAMP725 PE=2 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 2.324e-49
Identity = 84/111 (75.68%), Postives = 97/111 (87.39%), Query Frame = 1
Query:  139 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFG 471
            M Q++LIY+FVARG V+L EYTEF GNF ++A QCLQKLP+SNNKFTYNCD HTFNYLV+NG+TYCVVA ES GRQIPMAFLERVK++F  +YGGGKA TA AN LN+EFG
Sbjct:   66 MGQQNLIYSFVARGTVILVEYTEFKGNFTAVAAQCLQKLPSSNNKFTYNCDGHTFNYLVENGFTYCVVAVESVGRQIPMAFLERVKEDFNKRYGGGKATTAQANSLNREFG 176          

HSP 2 Score: 34.2686 bits (77), Expect = 2.324e-49
Identity = 21/47 (44.68%), Postives = 28/47 (59.57%), Query Frame = 3
Query:  561 KLKELMQYCVESLEENSKLGKGKGSGFRSQRG*EGKKLKRV*KRGEK 701
            KLKE MQYCV+  +E SKL K K       +G   + +++V  RGEK
Sbjct:  178 KLKEHMQYCVDHPDEISKLAKVKAQ-VTEVKGVMMENIEKVLDRGEK 223          
BLAST of EY675137 vs. ExPASy Swiss-Prot
Match: VA721_ARATH (Vesicle-associated membrane protein 721 OS=Arabidopsis thaliana GN=VAMP721 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 5.165e-49
Identity = 84/111 (75.68%), Postives = 100/111 (90.09%), Query Frame = 1
Query:  139 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFG 471
            M+Q+SLIY+FVARG V+L E+T+F GNF SIA QCLQKLP+SNNKFTYNCD HTFNYLV++G+TYCVVA +S+GRQIPM+FLERVK++F  +YGGGKAATA AN LNKEFG
Sbjct:    1 MAQQSLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVEDGFTYCVVAVDSAGRQIPMSFLERVKEDFNKRYGGGKAATAQANSLNKEFG 111          

HSP 2 Score: 33.113 bits (74), Expect = 5.165e-49
Identity = 20/47 (42.55%), Postives = 28/47 (59.57%), Query Frame = 3
Query:  561 KLKELMQYCVESLEENSKLGKGKGSGFRSQRG*EGKKLKRV*KRGEK 701
            KLKE MQYC++  +E SKL K K       +G   + +++V  RGEK
Sbjct:  113 KLKEHMQYCMDHPDEISKLAKVKAQ-VSEVKGVMMENIEKVLDRGEK 158          
BLAST of EY675137 vs. ExPASy Swiss-Prot
Match: VA723_ARATH (Vesicle-associated membrane protein 723 OS=Arabidopsis thaliana GN=VAMP723 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 2.426e-42
Identity = 76/111 (68.47%), Postives = 94/111 (84.68%), Query Frame = 1
Query:  139 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFG 471
            M+Q+SL Y+F+ARG V+L E+T+F GNF S+A Q L+ LP+SNNKFTYNCD HTFN LV+NG+TYCVVA +S+GR+IPMAFLERVK++F  +YGG KAAT  AN LNKEFG
Sbjct:    1 MAQQSLFYSFIARGTVILVEFTDFKGNFTSVAAQYLENLPSSNNKFTYNCDGHTFNDLVENGFTYCVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAATDQANSLNKEFG 111          

HSP 2 Score: 26.9498 bits (58), Expect = 2.426e-42
Identity = 12/22 (54.55%), Postives = 15/22 (68.18%), Query Frame = 3
Query:  564 LKELMQYCVESLEENSKLGKGK 629
            LKE MQYC++  +E S L K K
Sbjct:  114 LKEHMQYCMDHPDEISNLAKAK 135          
BLAST of EY675137 vs. ExPASy Swiss-Prot
Match: VA724_ARATH (Vesicle-associated membrane protein 724 OS=Arabidopsis thaliana GN=VAMP724 PE=2 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 1.067e-39
Identity = 78/112 (69.64%), Postives = 94/112 (83.93%), Query Frame = 1
Query:  139 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNN-KFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFG 471
            M Q+S IY+FVARG ++LAEYTEF+GNF SIA QCLQKLP+S+N KFTYNCD HTFN+LV++GY YCVVA +S  +QI +AFLERVK +F  +YGGGKA+TA A  LNKEFG
Sbjct:    1 MGQESFIYSFVARGTMILAEYTEFTGNFPSIAAQCLQKLPSSSNSKFTYNCDHHTFNFLVEDGYAYCVVAKDSLSKQISIAFLERVKADFKKRYGGGKASTAIAKSLNKEFG 112          

HSP 2 Score: 23.0978 bits (48), Expect = 1.067e-39
Identity = 12/24 (50.00%), Postives = 14/24 (58.33%), Query Frame = 3
Query:  558 PKLKELMQYCVESLEENSKLGKGK 629
            P +KE M Y V+  EE  KL K K
Sbjct:  113 PVMKEHMNYIVDHAEEIEKLIKVK 136          
BLAST of EY675137 vs. ExPASy Swiss-Prot
Match: VA727_ARATH (Vesicle-associated membrane protein 727 OS=Arabidopsis thaliana GN=VAMP727 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 3.110e-32
Identity = 61/93 (65.59%), Postives = 80/93 (86.02%), Query Frame = 1
Query:  139 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKY 417
            MSQK LIY+FVA+G VVLAE+T +SGNF++IA QCLQKLP +++K+TY+CD HTFN+LVDNG+ + VVADES+GR +P  FLERVK++F  +Y
Sbjct:    1 MSQKGLIYSFVAKGTVVLAEHTPYSGNFSTIAVQCLQKLPTNSSKYTYSCDGHTFNFLVDNGFVFLVVADESTGRSVPFVFLERVKEDFKKRY 93          
BLAST of EY675137 vs. ExPASy Swiss-Prot
Match: VAM7B_DICDI (Vesicle-associated membrane protein 7B OS=Dictyostelium discoideum GN=vamp7B PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.268e-17
Identity = 47/105 (44.76%), Postives = 68/105 (64.76%), Query Frame = 1
Query:  154 LIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEF 468
            +IY+ VARG+ VLAE+T  +GNF +I  + L  +P ++ K +Y  + + F+YLV +  TY  +ADE  GR+IP  FL+ VK+ F S Y G K  TA A G+N +F
Sbjct:    3 IIYSLVARGSSVLAEFTSTNGNFVTITRRILDLIPPNDTKMSYVYEKYIFHYLVSDTLTYLCMADEEFGRRIPFTFLDDVKNRFKSMY-GDKGKTAIAYGMNSDF 106          
BLAST of EY675137 vs. ExPASy Swiss-Prot
Match: VA711_ARATH (Vesicle-associated membrane protein 711 OS=Arabidopsis thaliana GN=VAMP711 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 1.005e-14
Identity = 45/107 (42.06%), Postives = 68/107 (63.55%), Query Frame = 1
Query:  151 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASN-NKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEF 468
            +++YA VARG VVL+E+T  S N ++IA Q L+K+P  N +  +Y+ D + F+    +G T   +A+E++GR+IP AFLE +   FV  YG     TA A  +N+EF
Sbjct:    2 AILYALVARGTVVLSEFTATSTNASTIAKQILEKVPGDNDSNVSYSQDRYVFHVKRTDGLTVLCMAEETAGRRIPFAFLEDIHQRFVRTYGRA-VHTALAYAMNEEF 107          
BLAST of EY675137 vs. ExPASy Swiss-Prot
Match: VA713_ARATH (Vesicle-associated membrane protein 713 OS=Arabidopsis thaliana GN=VAMP713 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.451e-13
Identity = 44/108 (40.74%), Postives = 67/108 (62.04%), Query Frame = 1
Query:  151 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPA--SNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEF 468
            ++I+A VARG VVL+E++  S N +SI+ Q L+KLP   S++  +Y+ D + F+    +G T   +ADE++GR IP AFL+ +   FV  YG     +A A  +N EF
Sbjct:    2 AIIFALVARGTVVLSEFSATSTNASSISKQILEKLPGNDSDSHMSYSQDRYIFHVKRTDGLTVLCMADETAGRNIPFAFLDDIHQRFVKTYGRA-IHSAQAYSMNDEF 108          
The following BLAST results are available for this feature:
BLAST of EY675137 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
VA726_ARATH9.697e-5178.38Putative vesicle-associated membrane protein 726 O... [more]
VA722_ARATH6.200e-5077.48Vesicle-associated membrane protein 722 OS=Arabido... [more]
VA725_ARATH2.324e-4975.68Vesicle-associated membrane protein 725 OS=Arabido... [more]
VA721_ARATH5.165e-4975.68Vesicle-associated membrane protein 721 OS=Arabido... [more]
VA723_ARATH2.426e-4268.47Vesicle-associated membrane protein 723 OS=Arabido... [more]
VA724_ARATH1.067e-3969.64Vesicle-associated membrane protein 724 OS=Arabido... [more]
VA727_ARATH3.110e-3265.59Vesicle-associated membrane protein 727 OS=Arabido... [more]
VAM7B_DICDI1.268e-1744.76Vesicle-associated membrane protein 7B OS=Dictyost... [more]
VA711_ARATH1.005e-1442.06Vesicle-associated membrane protein 711 OS=Arabido... [more]
VA713_ARATH1.451e-1340.74Vesicle-associated membrane protein 713 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-006-E12-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675137 ID=EY675137; Name=EY675137; organism=Citrus sinensis; type=EST; length=1003bp
CGCGTAAAAAAGCAAAGCATAGCAACAAACAAAATTGGAGAGGAGAGAGA
GACCTCTTGGAGCTTTAAAACAAAATAAAAAATAAAAACAAGCCCAGATC
TCATCTCATCTCAACTCGACTCAATTAGTCTCATCAAAATGAGCCAGAAA
TCGCTGATCTACGCCTTCGTGGCGCGCGGAAATGTTGTGCTTGCTGAGTA
CACTGAGTTCAGTGGCAATTTCAACTCCATAGCCTATCAGTGCCTCCAGA
AACTCCCTGCTTCCAACAACAAGTTCACTTACAACTGTGATGCTCACACC
TTCAATTATCTCGTCGATAATGGTTACACATATTGTGTGGTCGCAGATGA
ATCGTCCGGAAGACAAATACCGATGGCTTTTCTGGAGCGCGTCAAGGATG
AATTTGTTTCCAAATATGGGGGTGGAAAGGCTGCCACGGCTCCTGCCAAT
GGCCTGAACAAGGAATTTGGGTATTCTGTTGTGATTCTGATATTAAAGCC
CATGAACAGACGATTTTCTTGTTACTCTAGTTTGCTTAATATATTAAACT
TTGCAGACCAAAATTGAAAGAACTAATGCAGTACTGTGTTGAATCTCTGG
AGGAAAACAGCAAGCTTGGGAAGGGTAAAGGCTCAGGTTTCAGAAGTCAA
AGGGGGTAAGAAGGGAAAAAATTGAAAAGGGTTTAAAAAAGGGGGGAAAA
AAATGGGGCTACGGGGGCAAAAAAAACGGAAAAACCTTCATCCCCAGGGG
AACAAAATTTTCGGAAAAACGGGGGAACAAAAAGGGGGGGGAAAAAGGGG
GGGTGGCCAAAAAAAGAAAGAAAAACAGCGAAGATGGGTTTGGGGGAAAA
AGGAGGTGGGGCCGGGGACCCCCACCGCAAAAGCCCCCCCCGCGGTTGTG
GCGGGGGGGGTCTCAGAGGGGGGGGGGAAAAAAGGGGGGGGGCTGTTATT
CCCCCAGGGGGGGGGGTGTTTATATAATATTACACCCCCCTCTTTTCTAA
GAA
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