EY675130

Overview
NameEY675130
Unique NameEY675130
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675130 vs. ExPASy Swiss-Prot
Match: IDH_AZOVI (Isocitrate dehydrogenase [NADP] OS=Azotobacter vinelandii GN=icd PE=1 SV=5)

HSP 1 Score: 273.863 bits (699), Expect = 9.192e-73
Identity = 145/210 (69.05%), Postives = 155/210 (73.81%), Query Frame = 1
Query:   10 SPWERTPFGL-------DTISVTGNVFPDYLTDLFPIMELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQLVEENFLRWDSLGEFLALAASLEHLGVNYNNPKALVLSKTLDQATGQFLDNNKSPSRKVGNIDNRGSHFXXXXXXXXXXXXXTEDTALQAQFGELAKTLTANQATIVAELNAVQGKPVDIGGYYPPKRRTDRQGLAP 618
            SP E T F L       DTISVTGNV  DYLTDLFPIMELGTSAKMLSIVPLM+GGGLFETGAGGSAPKHVQQ +EE +LRWDSLGEFLALAASLEHLG  Y NPKALVL+ TLDQATG+ LDNNKSP+RKVG IDNRGSHF             TED  LQAQF  +AK LT N+  IV EL A QGKPVDI GYY P      + + P
Sbjct:  520 SPVEATRFSLARIREGKDTISVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMSGGGLFETGAGGSAPKHVQQFLEEGYLRWDSLGEFLALAASLEHLGNAYKNPKALVLASTLDQATGKILDNNKSPARKVGEIDNRGSHFYLALYWAQALAAQTEDKELQAQFTGIAKALTDNETKIVGELAAAQGKPVDIAGYYHPNTDLTSKAIRP 729          
BLAST of EY675130 vs. ExPASy Swiss-Prot
Match: IDH2_COLMA (Isocitrate dehydrogenase [NADP] 2 OS=Colwellia maris GN=icd2 PE=1 SV=3)

HSP 1 Score: 247.669 bits (631), Expect = 7.054e-65
Identity = 127/199 (63.82%), Postives = 143/199 (71.86%), Query Frame = 1
Query:   22 RTPFGLDTISVTGNVFPDYLTDLFPIMELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQLVEENFLRWDSLGEFLALAASLEHLGVNYNNPKALVLSKTLDQATGQFLDNNKSPSRKVGNIDNRGSHFXXXXXXXXXXXXXTEDTALQAQFGELAKTLTANQATIVAELNAVQGKPVDIGGYYPPKRRTDRQGLAP 618
            R   G D ISVTGNV  DYLTDLFPI+ELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQ  +EN LRWDSLGEFLALAASLEH+ V   N +A +L+ TLD ATG+FLD NKSPSRKVG +DNRGSHF             T DT LQA F  +A+ LT  +  IVAELNA QG  +D+ GYY    +   + + P
Sbjct:  533 RVAKGEDAISVTGNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQFEKENHLRWDSLGEFLALAASLEHVAVTTGNARAQILADTLDAATGKFLDTNKSPSRKVGELDNRGSHFYLAMYWAQALAAQTTDTELQASFSSVAQALTKQEEKIVAELNAAQGPAIDLNGYYFADTKLAEKAMRP 731          
BLAST of EY675130 vs. ExPASy Swiss-Prot
Match: IDH_COREF (Isocitrate dehydrogenase [NADP] OS=Corynebacterium efficiens GN=icd PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 3.174e-57
Identity = 119/189 (62.96%), Postives = 131/189 (69.31%), Query Frame = 1
Query:   19 ERTPFGLDTISVTGNVFPDYLTDLFPIMELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQLVEENFLRWDSLGEFLALAASLEHLGVNYNNPKALVLSKTLDQATGQFLDNNKSPSRKVGNIDNRGSHFXXXXXXXXXXXXXTEDTALQAQFGELAKTLTANQATIVAELNAVQGKPVDIGGYYPP 585
            +R   G DTISVTGNV  DY TDLFPI+ELGTSAKMLS+VPLM GGGLFETGAGGSAPKHVQQ++EEN LRWDSLGEFLALA S  H     NN KA VL+  LD+AT + L+  KSPSRKVG IDNRGSHF             TED  L   F  +A+ L    A I A L   QGKPVD+GGYY P
Sbjct:  517 DRIRRGEDTISVTGNVLRDYNTDLFPILELGTSAKMLSVVPLMAGGGLFETGAGGSAPKHVQQVIEENHLRWDSLGEFLALAESFRHELNTRNNTKAGVLADALDRATEKLLNEEKSPSRKVGEIDNRGSHFWLATYWADELANQTEDAELAETFAPVAEALNNQAADIDAALIGEQGKPVDLGGYYAP 705          
BLAST of EY675130 vs. ExPASy Swiss-Prot
Match: IDH_CORGL (Isocitrate dehydrogenase [NADP] OS=Corynebacterium glutamicum GN=icd PE=1 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.687e-56
Identity = 119/189 (62.96%), Postives = 130/189 (68.78%), Query Frame = 1
Query:   19 ERTPFGLDTISVTGNVFPDYLTDLFPIMELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQLVEENFLRWDSLGEFLALAASLEHLGVNYNNPKALVLSKTLDQATGQFLDNNKSPSRKVGNIDNRGSHFXXXXXXXXXXXXXTEDTALQAQFGELAKTLTANQATIVAELNAVQGKPVDIGGYYPP 585
            +R   G DTISVTGNV  DY TDLFPI+ELGTSAKMLS+VPLM GGGLFETGAGGSAPKHVQQ+ EEN LRWDSLGEFLALA S  H   N  N KA VL+  LD+AT + L+  KSPSRKVG IDNRGSHF             TED  L A F  +A+ L    A I A L AVQG   D+GGYY P
Sbjct:  526 DRIRRGEDTISVTGNVLRDYNTDLFPILELGTSAKMLSVVPLMAGGGLFETGAGGSAPKHVQQVQEENHLRWDSLGEFLALAESFRHELNNNGNTKAGVLADALDKATEKLLNEEKSPSRKVGEIDNRGSHFWLTKFWADELAAQTEDADLAATFAPVAEALNTGAADIDAALLAVQGGATDLGGYYSP 714          
The following BLAST results are available for this feature:
BLAST of EY675130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
IDH_AZOVI9.192e-7369.05Isocitrate dehydrogenase [NADP] OS=Azotobacter vin... [more]
IDH2_COLMA7.054e-6563.82Isocitrate dehydrogenase [NADP] 2 OS=Colwellia mar... [more]
IDH_COREF3.174e-5762.96Isocitrate dehydrogenase [NADP] OS=Corynebacterium... [more]
IDH_CORGL2.687e-5662.96Isocitrate dehydrogenase [NADP] OS=Corynebacterium... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-006-E04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675130 ID=EY675130; Name=EY675130; organism=Citrus sinensis; type=EST; length=913bp
CGATGAAGTTCACCCTGGGAGCGCACCCCCTTTGGCCTGGACACCATCTC
GGTGACCGGCAACGTATTCCCCGACTACCTGACTGACCTGTTCCCGATCA
TGGAACTGGGCACCAGCGCCAAGATGCTGTCGATCGTGCCACTGATGAAC
GGTGGCGGCCTGTTCGAAACCGGTGCCGGCGGTTCGGCTCCGAAGCACGT
ACAGCAACTGGTTGAAGAAAACTTCCTGCGCTGGGATTCCCTGGGCGAGT
TCCTGGCCCTGGCCGCGTCCCTCGAGCATTTGGGTGTGAACTACAACAAC
CCGAAAGCCCTGGTGCTGTCCAAGACCCTGGACCAGGCCACCGGCCAGTT
CCTCGACAACAACAAGTCACCATCGCGCAAAGTCGGCAACATCGACAACC
GCGGCAGCCACTTCTACCTGGCTCTGTACTGGGCTCAAGCCCTGGCCGCC
CAGACGGAAGACACTGCACTGCAAGCGCAGTTTGGCGAACTGGCCAAGAC
CCTGACCGCGAACCAAGCAACCATCGTTGCCGAGCTCAACGCCGTTCAGG
GCAAGCCCGTGGACATCGGTGGCTACTACCCACCGAAACGCCGAACTGAC
CGCCAAGGCCTTGCGCCCAAGCCCCACCCTCAACCCGGAAATCGCTTGGC
TGGTGTAAAGGGTGAAGGGTGCAAAAAAACCCCCGGCCCTGTGCCGGGGG
TTTCTGTTTTCTGGGAATTGACTTTTTTTATTGAAAAAAACCCAATCAAA
AAATGGGGGGGATGTATCGTAGATTAAACCCTATGAGTTGAGGTAGGGTA
GTGTGATCCGGTCGTATCGAGTTGAAATCTACGAGAACTTCCACAAACAA
CGATAGGGAATGATAAACATAAAAAACAATGAAATTCATCTTAATGATAA
CTGAGAAGGAGTC
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