EY675122

Overview
NameEY675122
Unique NameEY675122
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length983
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675122 vs. ExPASy Swiss-Prot
Match: DCMC_ANSAN (Malonyl-CoA decarboxylase, mitochondrial OS=Anser anser anser GN=MLYCD PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 1.840e-27
Identity = 42/95 (44.21%), Postives = 61/95 (64.21%), Query Frame = 2
Query:  314 LRALDSYLKEKLGTWLSPAALELHQITWDDPASLLEKIVAYEAVHPISNLLDLKRRLGVGRRCFGYLHAAIPGEPLIFIEVALLKNVAQTIQEVL 598
            ++ +   LK  L  W S   L L ++TW  P  +L+KI   EAVHP+ N +DLKRR+G  RRC+ + H AIPGEPLI + VAL  +++ +IQ ++
Sbjct:  186 VKEMSGVLKNMLSEWFSTGFLNLERVTWQSPCEVLQKISDSEAVHPVRNWVDLKRRVGPYRRCYFFSHCAIPGEPLIILHVALTSDISSSIQSIV 280          

HSP 2 Score: 38.5058 bits (88), Expect = 1.840e-27
Identity = 20/39 (51.28%), Postives = 25/39 (64.10%), Query Frame = 3
Query:  633 TCALFYSISSTQRGLAGINLRKFLIKRVIPLGKKSYAQI 749
            T A+FYSIS  Q+GL G+ L   LIKRV+   +K   QI
Sbjct:  295 TTAIFYSISLAQQGLQGVELGNHLIKRVVKELQKDLPQI 333          

HSP 3 Score: 28.8758 bits (63), Expect = 1.840e-27
Identity = 13/39 (33.33%), Postives = 21/39 (53.85%), Query Frame = 1
Query:  178 EEDGVLGSFYRIERNLRHALKPMYEGLFERLNMHPGGLK 294
            E++   G+  + E  +R+ L P Y  LF+ L    GGL+
Sbjct:  125 EQEREQGALLQAEDRVRYYLTPRYRALFQHLGRLEGGLR 163          
BLAST of EY675122 vs. ExPASy Swiss-Prot
Match: DCMC_MOUSE (Malonyl-CoA decarboxylase, mitochondrial OS=Mus musculus GN=Mlycd PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 4.026e-27
Identity = 39/95 (41.05%), Postives = 60/95 (63.16%), Query Frame = 2
Query:  314 LRALDSYLKEKLGTWLSPAALELHQITWDDPASLLEKIVAYEAVHPISNLLDLKRRLGVGRRCFGYLHAAIPGEPLIFIEVALLKNVAQTIQEVL 598
            +R ++  LK  L  W S   L L ++TW  P  +L+KI   EAVHP+ N +D+KRR+G  RRC+ + H + PGEPL+ + VAL  +++  IQ ++
Sbjct:  174 VREMNGVLKSMLSEWFSSGFLNLERVTWHSPCEVLQKISECEAVHPVKNWMDMKRRVGPYRRCYFFSHCSTPGEPLVVLHVALTGDISNNIQGIV 268          

HSP 2 Score: 41.9726 bits (97), Expect = 4.026e-27
Identity = 20/37 (54.05%), Postives = 27/37 (72.97%), Query Frame = 3
Query:  639 ALFYSISSTQRGLAGINLRKFLIKRVIPLGKKSYAQI 749
            A+FYSIS TQ+GL G+ L  FLIKRV+   +K + Q+
Sbjct:  285 AIFYSISLTQQGLQGVELGTFLIKRVVKELQKEFPQL 321          

HSP 3 Score: 28.4906 bits (62), Expect = 4.026e-27
Identity = 12/27 (44.44%), Postives = 17/27 (62.96%), Query Frame = 1
Query:  214 ERNLRHALKPMYEGLFERLNMHPGGLK 294
            E  LR+AL P Y GLF  ++   GG++
Sbjct:  125 EDRLRYALVPRYRGLFHHISKLDGGVR 151          
BLAST of EY675122 vs. ExPASy Swiss-Prot
Match: DCMC_HUMAN (Malonyl-CoA decarboxylase, mitochondrial OS=Homo sapiens GN=MLYCD PE=1 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 8.802e-27
Identity = 39/95 (41.05%), Postives = 60/95 (63.16%), Query Frame = 2
Query:  314 LRALDSYLKEKLGTWLSPAALELHQITWDDPASLLEKIVAYEAVHPISNLLDLKRRLGVGRRCFGYLHAAIPGEPLIFIEVALLKNVAQTIQEVL 598
            +R ++  LK  L  W S   L L ++TW  P  +L+KI   EAVHP+ N +D+KRR+G  RRC+ + H + PGEPL+ + VAL  +++  IQ ++
Sbjct:  175 VREMNGVLKGMLSEWFSSGFLNLERVTWHSPCEVLQKISEAEAVHPVKNWMDMKRRVGPYRRCYFFSHCSTPGEPLVVLHVALTGDISSNIQAIV 269          

HSP 2 Score: 41.2022 bits (95), Expect = 8.802e-27
Identity = 19/29 (65.52%), Postives = 23/29 (79.31%), Query Frame = 3
Query:  633 TCALFYSISSTQRGLAGINLRKFLIKRVI 719
            T A+FYSIS TQ+GL G+ L  FLIKRV+
Sbjct:  284 TAAIFYSISLTQQGLQGVELGTFLIKRVV 312          

HSP 3 Score: 28.4906 bits (62), Expect = 8.802e-27
Identity = 12/27 (44.44%), Postives = 17/27 (62.96%), Query Frame = 1
Query:  214 ERNLRHALKPMYEGLFERLNMHPGGLK 294
            E  LR+AL P Y GLF  ++   GG++
Sbjct:  126 EDRLRYALVPRYRGLFHHISKLDGGVR 152          
BLAST of EY675122 vs. ExPASy Swiss-Prot
Match: DCMC_RAT (Malonyl-CoA decarboxylase, mitochondrial OS=Rattus norvegicus GN=Mlycd PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.497e-26
Identity = 38/95 (40.00%), Postives = 60/95 (63.16%), Query Frame = 2
Query:  314 LRALDSYLKEKLGTWLSPAALELHQITWDDPASLLEKIVAYEAVHPISNLLDLKRRLGVGRRCFGYLHAAIPGEPLIFIEVALLKNVAQTIQEVL 598
            +R ++  LK  L  W S   L L ++TW  P  +L+KI   EAVHP+ N +D+KRR+G  RRC+ + H + PG+PL+ + VAL  +++  IQ ++
Sbjct:  174 VREMNGVLKSMLSEWFSSGFLNLERVTWHSPCEVLQKISECEAVHPVKNWMDMKRRVGPYRRCYFFSHCSTPGDPLVVLHVALTGDISNNIQSIV 268          

HSP 2 Score: 39.6614 bits (91), Expect = 2.497e-26
Identity = 19/37 (51.35%), Postives = 26/37 (70.27%), Query Frame = 3
Query:  639 ALFYSISSTQRGLAGINLRKFLIKRVIPLGKKSYAQI 749
            A+FYSIS TQ+GL G+ L  FLIKRV+   +K +  +
Sbjct:  285 AVFYSISLTQQGLQGVELGTFLIKRVVKELQKEFPHL 321          

HSP 3 Score: 28.4906 bits (62), Expect = 2.497e-26
Identity = 12/27 (44.44%), Postives = 17/27 (62.96%), Query Frame = 1
Query:  214 ERNLRHALKPMYEGLFERLNMHPGGLK 294
            E  LR+AL P Y GLF  ++   GG++
Sbjct:  125 EDRLRYALVPRYRGLFHHISKLDGGVR 151          
The following BLAST results are available for this feature:
BLAST of EY675122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
DCMC_ANSAN1.840e-2744.21Malonyl-CoA decarboxylase, mitochondrial OS=Anser ... [more]
DCMC_MOUSE4.026e-2741.05Malonyl-CoA decarboxylase, mitochondrial OS=Mus mu... [more]
DCMC_HUMAN8.802e-2741.05Malonyl-CoA decarboxylase, mitochondrial OS=Homo s... [more]
DCMC_RAT2.497e-2640.00Malonyl-CoA decarboxylase, mitochondrial OS=Rattus... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-006-D07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675122 ID=EY675122; Name=EY675122; organism=Citrus sinensis; type=EST; length=983bp
CTGTGCTTAACGATTTCTCTGAGGGATATTTTAGCCTTTGTTATGAGAAT
CGCAGGACATTATTACTTGTACTAGCCAAAGAGTATGATCTTAATCGAAC
TCAAGTTTGTGAATTGATAAAGCAATATCTTGGAGAAGTTTCTAGTGCTG
GGCGAGGAGGCGCAGTCAGCTGGTCATGAAGAGGATGGTGTGCTAGGTTC
ATTTTACCGGATTGAGCGAAACTTGAGACATGCACTTAAGCCAATGTATG
AAGGTCTCTTTGAGCGACTCAATATGCATCCTGGAGGATTGAAGAGAGGA
GAATATTGCATCTTTGCGAGCTCTGGACTCCTATCTAAAGGAGAAACTTG
GTACATGGCTGAGTCCTGCTGCTTTAGAACTTCACCAGATTACATGGGAC
GACCCTGCTTCTTTGCTGGAGAAAATTGTGGCTTATGAAGCTGTCCATCC
AATCAGCAATCTTCTAGATCTAAAGAGAAGGCTGGGAGTTGGTCGTCGTT
GTTTTGGGTATTTACATGCAGCAATTCCTGGTGAACCCCTTATTTTTATT
GAAGTTGCGCTGTTGAAGAATGTGGCTCAGACAATACAAGAAGTTTTATG
GGGATGATCCTCCCCTACCTGAATGTGAGGCAACATGTGCATTATTTTAT
TCTATATCTTCAACTCAGCGTGGTTTGGCAGGGATCAATCTAAGGAAATT
TTTAATTAAACGTGTAATCCCCTTGGGGAAAAAAAGTTATGCCCAAATTT
TTCTACTTTTGGCAAAAATAACCCCAAATACCCGGATTTTTTCCCGGGGC
TTTTTTCCAAATTTGGGATCCCCAAACCAAAAATTTGGGAAAATAAAAGG
GAAATTCCCCAAAACCCCCCCAAAAAAAAAAATTTGGGGGTTTTTCGGTT
TTTCCCCAAAAAAAAAAAAACTTTTTTGGAACCCGGGAGGGGAAGAAAAA
AAAAAAAGCTTCCTTTAAAGGGGGGATGATTTT
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