EY675113

Overview
NameEY675113
Unique NameEY675113
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length988
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675113 vs. ExPASy Swiss-Prot
Match: UBC2_ARATH (Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.061e-78
Identity = 91/94 (96.81%), Postives = 94/94 (100.00%), Query Frame = 2
Query:   89 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN 370
            MSTPA+KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQF+EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN
Sbjct:    1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN 94          

HSP 2 Score: 116.316 bits (290), Expect = 2.061e-78
Identity = 54/57 (94.74%), Postives = 57/57 (100.00%), Query Frame = 3
Query:  375 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWTAD 545
            WSPIYDVAAILTSIQSLLCDPNPNSPANSEAAR+FSE+KREYNRRVRE+VEQSWTAD
Sbjct:   96 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSESKREYNRRVREVVEQSWTAD 152          
BLAST of EY675113 vs. ExPASy Swiss-Prot
Match: UBC2_MEDSA (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 2.061e-78
Identity = 90/94 (95.74%), Postives = 93/94 (98.94%), Query Frame = 2
Query:   89 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN 370
            MSTPA+KRLMRDFKRLQ DPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQF+EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN
Sbjct:    1 MSTPARKRLMRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN 94          

HSP 2 Score: 118.242 bits (295), Expect = 2.061e-78
Identity = 55/57 (96.49%), Postives = 57/57 (100.00%), Query Frame = 3
Query:  375 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWTAD 545
            WSPIYDVAAILTSIQSLLCDPNPNSPANSEAAR+FSENKREYNRRVRE+VEQSWTAD
Sbjct:   96 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREVVEQSWTAD 152          
BLAST of EY675113 vs. ExPASy Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.966e-78
Identity = 91/94 (96.81%), Postives = 92/94 (97.87%), Query Frame = 2
Query:   89 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN 370
            MSTPA+KRLMRDFKRLQQDPPAGISGAP DNNI LWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN
Sbjct:    1 MSTPARKRLMRDFKRLQQDPPAGISGAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN 94          

HSP 2 Score: 115.931 bits (289), Expect = 5.966e-78
Identity = 53/57 (92.98%), Postives = 57/57 (100.00%), Query Frame = 3
Query:  375 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWTAD 545
            WSPIYDVAAILTSIQSLLCDPNPNSPANSEAAR++SENKREYNR+VRE+VEQSWTAD
Sbjct:   96 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSENKREYNRKVREVVEQSWTAD 152          
BLAST of EY675113 vs. ExPASy Swiss-Prot
Match: UBC1_ARATH (Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1 PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.015e-77
Identity = 91/94 (96.81%), Postives = 94/94 (100.00%), Query Frame = 2
Query:   89 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN 370
            MSTPA+KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQF+EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN
Sbjct:    1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN 94          

HSP 2 Score: 114.005 bits (284), Expect = 1.015e-77
Identity = 52/57 (91.23%), Postives = 57/57 (100.00%), Query Frame = 3
Query:  375 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWTAD 545
            WSPIYDVAAILTSIQSLLCDPNPNSPANSEAAR++SE+KREYNRRVR++VEQSWTAD
Sbjct:   96 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSWTAD 152          
BLAST of EY675113 vs. ExPASy Swiss-Prot
Match: UBC3_ARATH (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.878e-70
Identity = 85/94 (90.43%), Postives = 89/94 (94.68%), Query Frame = 2
Query:   89 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN 370
            M+TPAKKRLM DFKRLQ+DPP GISGAPQDNNIM WNA+IFGP+DTPWDGGTFKLTL FTEDYPNKPP VRFVSRMFHPNIYADGSICLDILQN
Sbjct:    1 MTTPAKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDILQN 94          

HSP 2 Score: 102.449 bits (254), Expect = 1.878e-70
Identity = 48/54 (88.89%), Postives = 53/54 (98.15%), Query Frame = 3
Query:  375 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSW 536
            WSPIYDVAA+LTSIQSLLCDPNP+SPAN+EAARLFSENKREYNR+V EIVEQS+
Sbjct:   96 WSPIYDVAAVLTSIQSLLCDPNPDSPANAEAARLFSENKREYNRKVIEIVEQSY 149          
BLAST of EY675113 vs. ExPASy Swiss-Prot
Match: UBC2_DICDI (Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium discoideum GN=ubc2 PE=3 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 1.003e-65
Identity = 72/94 (76.60%), Postives = 86/94 (91.49%), Query Frame = 2
Query:   89 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN 370
            MST A++RLMRDFKRLQ DPPAGISGAP +NNI++W AVIFGPDD+ W+G TFKL+LQF+E+YPN  PTV+F+S+MFHPN+YADGSICLDILQN
Sbjct:    1 MSTAARRRLMRDFKRLQSDPPAGISGAPLENNILMWQAVIFGPDDSIWEGATFKLSLQFSEEYPNDAPTVKFLSKMFHPNVYADGSICLDILQN 94          

HSP 2 Score: 108.612 bits (270), Expect = 1.003e-65
Identity = 49/56 (87.50%), Postives = 55/56 (98.21%), Query Frame = 3
Query:  375 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWTA 542
            WSPIYD+AAILTSIQSLLCDPNPNSPANSE+ARLF ENKREYNR+V+EIVEQSW++
Sbjct:   96 WSPIYDIAAILTSIQSLLCDPNPNSPANSESARLFRENKREYNRKVKEIVEQSWSS 151          
BLAST of EY675113 vs. ExPASy Swiss-Prot
Match: UBE2A_MOUSE (Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 5.375e-64
Identity = 77/94 (81.91%), Postives = 91/94 (96.81%), Query Frame = 2
Query:   89 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN 370
            MSTPA++RLMRDFKRLQ+DPPAG+SGAP +NNIM+WNAVIFGP+ TP++ GTFKLT++FTE+YPNKPPTVRFVS+MFHPN+YADGSICLDILQN
Sbjct:    1 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQN 94          

HSP 2 Score: 89.7373 bits (221), Expect = 5.375e-64
Identity = 41/54 (75.93%), Postives = 48/54 (88.89%), Query Frame = 3
Query:  375 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSW 536
            WSP YDV++ILTSIQSLL +PNPNSPANS+AA+L+ ENKREY +RV  IVEQSW
Sbjct:   96 WSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQSW 149          
BLAST of EY675113 vs. ExPASy Swiss-Prot
Match: UBE2A_HUMAN (Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=2 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 5.375e-64
Identity = 77/94 (81.91%), Postives = 91/94 (96.81%), Query Frame = 2
Query:   89 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN 370
            MSTPA++RLMRDFKRLQ+DPPAG+SGAP +NNIM+WNAVIFGP+ TP++ GTFKLT++FTE+YPNKPPTVRFVS+MFHPN+YADGSICLDILQN
Sbjct:    1 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQN 94          

HSP 2 Score: 89.7373 bits (221), Expect = 5.375e-64
Identity = 41/54 (75.93%), Postives = 48/54 (88.89%), Query Frame = 3
Query:  375 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSW 536
            WSP YDV++ILTSIQSLL +PNPNSPANS+AA+L+ ENKREY +RV  IVEQSW
Sbjct:   96 WSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQSW 149          
BLAST of EY675113 vs. ExPASy Swiss-Prot
Match: UBCD6_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=UbcD6 PE=2 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 1.694e-62
Identity = 76/94 (80.85%), Postives = 89/94 (94.68%), Query Frame = 2
Query:   89 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN 370
            MSTPA++RLMRDFKRLQ+DPP G+SGAP DNNIM+WNAVIFGP DTP++ GTFKLT++FTE+YPNKPPTVRFVS++FHPN+YADG ICLDILQN
Sbjct:    1 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKVFHPNVYADGGICLDILQN 94          

HSP 2 Score: 86.2705 bits (212), Expect = 1.694e-62
Identity = 40/54 (74.07%), Postives = 47/54 (87.04%), Query Frame = 3
Query:  375 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSW 536
            WSP YDV+AILTSIQSLL DPNPNSPANS AA+L+ EN+REY +RV+  VEQS+
Sbjct:   96 WSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENRREYEKRVKACVEQSF 149          
BLAST of EY675113 vs. ExPASy Swiss-Prot
Match: UBE2B_RAT (Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 8.323e-62
Identity = 73/94 (77.66%), Postives = 88/94 (93.62%), Query Frame = 2
Query:   89 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN 370
            MSTPA++RLMRDFKRLQ+DPP G+SGAP +NNIM WNAVIFGP+ TP++ GTFKL ++F+E+YPNKPPTVRF+S+MFHPN+YADGSICLDILQN
Sbjct:    1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQN 94          

HSP 2 Score: 89.7373 bits (221), Expect = 8.323e-62
Identity = 41/54 (75.93%), Postives = 48/54 (88.89%), Query Frame = 3
Query:  375 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSW 536
            WSP YDV++ILTSIQSLL +PNPNSPANS+AA+L+ ENKREY +RV  IVEQSW
Sbjct:   96 WSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQSW 149          
The following BLAST results are available for this feature:
BLAST of EY675113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 228
Match NameE-valueIdentityDescription
UBC2_ARATH2.061e-7896.81Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis t... [more]
UBC2_MEDSA2.061e-7895.74Ubiquitin-conjugating enzyme E2 2 OS=Medicago sati... [more]
UBC2_WHEAT5.966e-7896.81Ubiquitin-conjugating enzyme E2 2 OS=Triticum aest... [more]
UBC1_ARATH1.015e-7796.81Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis t... [more]
UBC3_ARATH1.878e-7090.43Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis t... [more]
UBC2_DICDI1.003e-6576.60Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium... [more]
UBE2A_MOUSE5.375e-6481.91Ubiquitin-conjugating enzyme E2 A OS=Mus musculus ... [more]
UBE2A_HUMAN5.375e-6481.91Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens ... [more]
UBCD6_DROME1.694e-6280.85Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophi... [more]
UBE2B_RAT8.323e-6277.66Ubiquitin-conjugating enzyme E2 B OS=Rattus norveg... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-006-C04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675113 ID=EY675113; Name=EY675113; organism=Citrus sinensis; type=EST; length=988bp
TTCTTTCTCTAGAAGCTTCTCCTCTCATTCTCCCCCCTTACCCCCTCTGC
AAAAGCCGCTTCTCAGTTTTGCTCTCTAAAACGCCACTATGTCAACACCG
GCGAAGAAGCGGCTGATGCGGGACTTCAAGCGCCTCCAGCAAGATCCACC
CGCCGGAATCAGCGGGGCCCCTCAAGACAACAACATCATGTTATGGAACG
CCGTTATTTTTGGGCCTGATGATACTCCCTGGGACGGAGGTACGTTCAAG
TTGACTCTTCAGTTTACAGAGGATTATCCGAATAAACCTCCAACAGTTCG
GTTCGTTTCACGGATGTTTCATCCAAATATCTATGCGGATGGAAGTATCT
GCCTGGATATATTACAAAATCANGTGGAGTCCTATATATGATGTTGCAGC
TATACTGACCTCCATCCAGTCGCTGCTTTGTGATCCAAATCCAAACTCCC
CTGCAAATTCTGAAGCAGCTCGGCTGTTTAGTGAGAATAAACGAGAGTAC
AACCGAAGAGTGCGTGAAATAGTGGAGCAAAGCTGGACAGCCGACTAAAA
GTCCCATGAAAGCACCGGCCGGTTATGCTGGAGAAATAAAAGATGAAAAC
TGGGGCTGGTGGGGTTGGTTTGGTCAAAATAATGGAACCCGTATTCAATC
GGATTTCAGGTGCATTGTTAATTAAAAAAATCCCCTTCGAATCTTTCCTC
CCCAAAAACCCTGGGTGGAACCCTTGGTTATTTTTCCAACATTTCCCTCT
TCCTTTTCCAAAACTTTCCGGGTAAATGTAATTTTATTGGGGACATTTTG
GTAAGGGGGGTTTTTTGGGGGGCGGGAAAACCCTGTGGATGTTGTTCTTT
AAAAAAACCCCCCCAAAAAAGAAACCCCTTTTTTTTTTTGGGAAATTTTT
TTTATGGGGGGATATTTTTTTGGGGGGATTTGTGGTGGGCGGGGGGGCGC
CCAAAAAAAAATAAAAAAAAAAAAAGGAAACAAAAACA
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