EY675106

Overview
NameEY675106
Unique NameEY675106
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1064
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675106 vs. ExPASy Swiss-Prot
Match: XTH6_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2)

HSP 1 Score: 238.424 bits (607), Expect = 5.327e-62
Identity = 104/133 (78.20%), Postives = 115/133 (86.47%), Query Frame = 3
Query:    3 NHHHIVFYVDDVPIRVYKNSG--RAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECLA 395
            +H HIVFYVDDVPIR YKN+      +P +QPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYY+DFDIEGCPVPGP  C SNP NWWE   YQ+L A+EARRYRWVR+NHM+YDYCTD+SR+PVPPPEC A
Sbjct:  160 SHKHIVFYVDDVPIREYKNNEAKNIAYPTSQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYKDFDIEGCPVPGPTFCPSNPHNWWEGYAYQSLNAVEARRYRWVRVNHMVYDYCTDRSRFPVPPPECRA 292          
BLAST of EY675106 vs. ExPASy Swiss-Prot
Match: XTH7_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2)

HSP 1 Score: 234.187 bits (596), Expect = 1.005e-60
Identity = 101/135 (74.81%), Postives = 117/135 (86.67%), Query Frame = 3
Query:    3 NHHHIVFYVDDVPIRVYKNSG--RAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECLAGI 401
            NH  IVFYVD+VPIRVYKN+   + P+P  QPMGVYSTLWEADDWATRGG+EKI+WS+APFYAYY+DFDIEGCPVPGPA+C +N  NWWE + Y  L+ +EAR YRWVR+NHM+YDYCTDKSR+PVPPPEC AGI
Sbjct:  159 NHLRIVFYVDNVPIRVYKNNEARKVPYPRFQPMGVYSTLWEADDWATRGGIEKINWSRAPFYAYYKDFDIEGCPVPGPADCPANSKNWWEGSAYHQLSPVEARSYRWVRVNHMVYDYCTDKSRFPVPPPECSAGI 293          
BLAST of EY675106 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 6.336e-39
Identity = 73/132 (55.30%), Postives = 91/132 (68.94%), Query Frame = 3
Query:    3 NHHHIVFYVDDVPIRVYKNSGRA--PFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 389
            N + IVF+VDDVPIRV+KNS      FP NQPM +YS+LW ADDWATRGGLEK +W KAPF A YR F ++GC     A  C +    WW+   +Q L A + +R +WVR  + IY+YCTD+ R+PVPPPEC
Sbjct:  156 NMYQIVFFVDDVPIRVFKNSKDVGVKFPFNQPMKIYSSLWNADDWATRGGLEKTNWEKAPFVASYRGFHVDGCEASVNAKFCETQGKRWWDQKEFQDLDANQYKRLKWVRKRYTIYNYCTDRVRFPVPPPEC 287          
BLAST of EY675106 vs. ExPASy Swiss-Prot
Match: XTH1_SOLLC (Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.412e-38
Identity = 72/134 (53.73%), Postives = 91/134 (67.91%), Query Frame = 3
Query:    3 NHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN---CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 389
            N + IV +VDDVPIR +KNS      FP NQPM +YS+LW+ADDWATRGGLEK +W+ APF A Y  F ++GC    P     C +    WW+   +Q L A++ RR RWVR  + +Y+YCTDK+RYPVPPPEC
Sbjct:  157 NTYLIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTNWANAPFTASYTSFHVDGCEAATPQEVQVCNTKGMKWWDQKAFQDLDALQYRRLRWVRQKYTVYNYCTDKARYPVPPPEC 290          
BLAST of EY675106 vs. ExPASy Swiss-Prot
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.561e-37
Identity = 72/134 (53.73%), Postives = 87/134 (64.93%), Query Frame = 3
Query:    3 NHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN---CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 389
            N   IV +VDDVPIR +KNS      FP NQPM +YS+LW+ADDWATRGGLEK DWS APF A Y  F ++GC    P     C +    WW+   +Q L A++ RR RWVR  + IY+YCTD+ RYP  PPEC
Sbjct:  156 NTFQIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTDWSNAPFTASYTSFHVDGCEAATPQEVQVCNTKGMRWWDQKAFQDLDALQYRRLRWVRQKYTIYNYCTDRKRYPTLPPEC 289          
BLAST of EY675106 vs. ExPASy Swiss-Prot
Match: XTH_BRAOB (Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.726e-36
Identity = 70/132 (53.03%), Postives = 92/132 (69.70%), Query Frame = 3
Query:    3 NHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 389
            N + IVF+VD++PIRV+KN+      FP NQPM +YS+LW ADDWATRGGLEK +W+ APF A YR F I+GC     A  CA+    WW+ N ++ L A + RR +WVR+   IY+YCTD++R+PV P EC
Sbjct:  158 NLYQIVFFVDNIPIRVFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFIASYRGFHIDGCQASVEAKYCATQGRMWWDQNEFRDLDAEQYRRLKWVRMKWTIYNYCTDRTRFPVMPAEC 289          
BLAST of EY675106 vs. ExPASy Swiss-Prot
Match: XTHB_PHAAN (Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis GN=XTHB PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.943e-36
Identity = 69/132 (52.27%), Postives = 89/132 (67.42%), Query Frame = 3
Query:    3 NHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 389
            N + IVF VD++PIRV+KN       FP NQPM VY++LW ADDWATRGGLEK DWSKAPF A Y+ F ++GC     +  CA+    WW+   ++ L + + RR +WVR    IY+YCTD++RYP  PPEC
Sbjct:  156 NMYQIVFLVDNIPIRVFKNLKELGVKFPFNQPMKVYNSLWNADDWATRGGLEKTDWSKAPFVAEYKGFHVDGCEASVNSRFCATQGKRWWDQTEFRDLDSFQWRRLKWVRQKFTIYNYCTDRTRYPQLPPEC 287          
BLAST of EY675106 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 5.021e-36
Identity = 72/133 (54.14%), Postives = 90/133 (67.67%), Query Frame = 3
Query:    3 NHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYP-VPPPEC 389
            N + IVF+VD+VPIRV+KNS      FP +QPM +Y++LW ADDWATRGGLEK DWSKAPF A Y+ F I+GC     A  C +    WW+   ++ L A + RR RWVR  + IY+YCTD  RYP + PPEC
Sbjct:  157 NLYQIVFFVDEVPIRVFKNSKDLGVKFPFDQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIAAYKGFHIDGCEASVNAKFCDTQGKRWWDQPEFRDLDAAQWRRLRWVRQKYTIYNYCTDTKRYPHISPPEC 289          
BLAST of EY675106 vs. ExPASy Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 8.564e-36
Identity = 70/132 (53.03%), Postives = 87/132 (65.91%), Query Frame = 3
Query:    3 NHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 389
            N + IVFYVDD PIRV+KNS      FP NQPM +Y++LW ADDWATRGGLEK DWSKAPF A Y+ F I+GC     A  C +    WW+   ++ L A + ++  WVR  + IY+YCTD+ RY   PPEC
Sbjct:  155 NMYQIVFYVDDYPIRVFKNSNDLGVKFPFNQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVNAKFCDTQGKRWWDQPEFRDLDAAQWQKLAWVRNKYTIYNYCTDRKRYSQVPPEC 286          
BLAST of EY675106 vs. ExPASy Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.461e-35
Identity = 70/132 (53.03%), Postives = 84/132 (63.64%), Query Frame = 3
Query:    3 NHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 389
            N + I F+VDD PIRV+KNS      +P +QPM +YS+LW ADDWATRGG EK DWSKAPF A YR F ++GC     A  CA+    WW+   +Q L A + RR  WVR  H IY+YCTD  RY    PEC
Sbjct:  156 NLYMIAFFVDDTPIRVFKNSKDLGVRYPFDQPMKLYSSLWNADDWATRGGREKTDWSKAPFVASYRGFHVDGCEASAEAKFCATQGARWWDQPEFQDLDAAQYRRLAWVRKEHTIYNYCTDHDRYAAMAPEC 287          
The following BLAST results are available for this feature:
BLAST of EY675106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
XTH6_ARATH5.327e-6278.20Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH7_ARATH1.005e-6074.81Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH5_ARATH6.336e-3955.30Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH1_SOLLC1.412e-3853.73Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_TOBAC1.561e-3753.73Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_BRAOB1.726e-3653.03Xyloglucan endotransglucosylase/hydrolase OS=Brass... [more]
XTHB_PHAAN2.943e-3652.27Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_SOYBN5.021e-3654.14Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHA_PHAAN8.564e-3653.03Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH_WHEAT1.461e-3553.03Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-006-B05-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675106 ID=EY675106; Name=EY675106; organism=Citrus sinensis; type=EST; length=1064bp
GGAACCATCACCATATTGTCTTCTATGTGGATGATGTGCCCATCAGGGTT
TACAAAAACAGTGGAAGGGCTCCATTTCCAATGAACCAACCCATGGGGGT
GTATTCAACGCTGTGGGAAGCAGATGACTGGGCAACAAGAGGTGGTCTAG
AGAAAATAGATTGGAGCAAAGCTCCTTTTTATGCTTATTACAGAGACTTT
GATATTGAGGGCTGCCCAGTTCCTGGACCAGCAAACTGTGCCTCGAACCC
AGGTAACTGGTGGGAGGCAAATAATTATCAAGCCCTCACCGCCATGGAAG
CAAGAAGATACAGATGGGTTCGTCTCAACCACATGATCTATGATTATTGC
ACTGATAAATCAAGATACCCAGTACCCCCACCGGAATGCCTTGCCGGCAT
ATAAATTCAACCCGCCAATTAATTAAGCAGTTGGACGGTACTCCATATCC
GTATCATATCATGTATATTACTTCACGTACACGTCCTTTGTATTATTCCC
TATTCGTGTGAAAAGACTTATACGCATATCAAGGGAGGGGCGGGAGGGGG
AAATAAACATTGTGTGCATTTAAATGTAATTATGGGAGTGGGAAATATGT
TGGTTTTCTGCTCTGCTTGGTACATATATAAGTCTGAATTTTGATGCCCA
GTATTCTGTGCCAAATAAAAACTTCTTCTTAATTTGGGAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAGGNGAGAGAAAAAAAAAAAAAGAAAAGG
AAAAAAAAAAAAAAAAAGGGGGGGGGCCCCTCCAAAGAAACCCACTCTTA
ATTCCCCCGGTGTCGCGCACCCCCAAACCTCCTTTTTATATGGGCCCCCT
AAATTTTCATTTTCCGGGGGGCGCGCTTTTTTTACAAACCCCGGGGGGGG
GGGGGAAAAAAACCCCCGGGGGGTTTTTCCCACAAACATTTTATACCCCC
CCTTTTGGGCCCCCCCCACCCCCCTCCCCCCTTTTTTCCTCCCCGCGGCG
GGGGGGGGGGGAAATAANAAAAAGAAAGAAAAAAAAAAAAAGAGGGGCGG
CCCGCCGCCCCCCA
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