EY675101

Overview
NameEY675101
Unique NameEY675101
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1004
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675101 vs. ExPASy Swiss-Prot
Match: ZIP11_ARATH (Zinc transporter 11 OS=Arabidopsis thaliana GN=ZIP11 PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 8.391e-62
Identity = 113/158 (71.52%), Postives = 129/158 (81.65%), Query Frame = 3
Query:    6 SSLADSILLIVALCFHSVFEGIAIGVAETQADAWKALWTICLHKIFAAIAMGIALLRMIPDRPFLSCVAYAFAFAISSPVGVAIGIIIDATTQGPVADWIFAISMGLACGVFIYVSINHLLSKGYTPQKTVSVDTPNYKFXXXXXXXXXXXXXXXWDT 479
            +S+ DSILLIVALCFHSVFEGIAIG++ET++DAW+ALWTI LHKIFAAIAMGIALLRMIPDRP  S + Y+FAFAISSP+GVAIGI+IDATTQG +ADWIFA+SM LACGVF+YVS+NHLL+KGY P K V VD P YKF               WDT
Sbjct:  169 TSIGDSILLIVALCFHSVFEGIAIGISETKSDAWRALWTITLHKIFAAIAMGIALLRMIPDRPLFSSITYSFAFAISSPIGVAIGIVIDATTQGSIADWIFALSMSLACGVFVYVSVNHLLAKGYRPNKKVHVDEPRYKFLAVLFGVVVIAIVMIWDT 326          
BLAST of EY675101 vs. ExPASy Swiss-Prot
Match: ZIP2_ARATH (Zinc transporter 2 OS=Arabidopsis thaliana GN=ZIP2 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 3.307e-50
Identity = 93/157 (59.24%), Postives = 116/157 (73.89%), Query Frame = 3
Query:    6 SSLADSILLIVALCFHSVFEGIAIGVAETQADAWKALWTICLHKIFAAIAMGIALLRMIPDRPFLSCVAYAFAFAISSPVGVAIGIIIDATTQGPVADWIFAISMGLACGVFIYVSINHLLSKGYTPQKTVSVDTPNYKFXXXXXXXXXXXXXXXWD 476
            S   D+ LLI ALCFHS+FEGIAIG+++T++DAW+ LWTI LHK+FAA+AMGIALL++IP RPF   V Y+FAF ISSP+GV IGI I+AT+QG   DW +AISMGLACGVF+YV++NHL+SKGY P++    D P YKF               WD
Sbjct:  197 SGFGDTALLIFALCFHSIFEGIAIGLSDTKSDAWRNLWTISLHKVFAAVAMGIALLKLIPKRPFFLTVVYSFAFGISSPIGVGIGIGINATSQGAGGDWTYAISMGLACGVFVYVAVNHLISKGYKPREECYFDKPIYKFIAVFLGVALLSVVMIWD 353          
BLAST of EY675101 vs. ExPASy Swiss-Prot
Match: ZNTD_DICDI (Protein zntD OS=Dictyostelium discoideum GN=zntD PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.895e-13
Identity = 40/124 (32.26%), Postives = 71/124 (57.26%), Query Frame = 3
Query:    6 SSLADSILLIVALCFHSVFEGIAIGVAETQADAWKALWTICLHKIFAAIAMGIALLRMIPDRP-FLSCVAYAFAFAISSPVGVAIGIIIDATTQGPVADWIFAISMGLACGVFIYVSINHLLSK 374
            S++    +L++AL  HS+FEG+A+GV  ++   +  L  I  HKI A+ A+GI+ +    ++P FL      F F+++SP+G  +G++I     G     +  I  G+A G F+YV++  ++ K
Sbjct:  532 SNILLPFILVIALSIHSLFEGLAMGVQSSEIRVFDILIAIFAHKILASFALGISTITSSNEKPSFLKLFLLVFVFSLTSPIGSILGMVI--VGSGVTGSMVPPILQGIASGTFLYVAVVEIIPK 653          
BLAST of EY675101 vs. ExPASy Swiss-Prot
Match: S39A1_DANRE (Zinc transporter ZIP1 OS=Danio rerio GN=slc39a1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.026e-11
Identity = 44/122 (36.07%), Postives = 66/122 (54.10%), Query Frame = 3
Query:    3 ASSLADSILLIVALCFHSVFEGIAIGVAETQADAWKALWTICLHKIFAAIAMGIALLRMIPDRPFLSCVAYAFAFAISSPVGVAIGIIIDATTQGPVADWIFAISMGLACGVFIYVSINHLL 368
            A S   S +L ++L  HSVFEG+AIG+  T A   +    I +HK     ++ + L++    +P L  V Y   FAI SP+G+ IGI++   T+      I A+  GLA G FIY++   +L
Sbjct:  153 AHSSFRSFMLFLSLSLHSVFEGLAIGLQTTNAKVLEICIAILVHKSIIVFSLSVKLVQSAV-KP-LWVVLYVTVFAIMSPLGIGIGIVV-IETERQAGGLIQAVLEGLAAGTFIYITFLEIL 271          
The following BLAST results are available for this feature:
BLAST of EY675101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
ZIP11_ARATH8.391e-6271.52Zinc transporter 11 OS=Arabidopsis thaliana GN=ZIP... [more]
ZIP2_ARATH3.307e-5059.24Zinc transporter 2 OS=Arabidopsis thaliana GN=ZIP2... [more]
ZNTD_DICDI1.895e-1332.26Protein zntD OS=Dictyostelium discoideum GN=zntD P... [more]
S39A1_DANRE3.026e-1136.07Zinc transporter ZIP1 OS=Danio rerio GN=slc39a1 PE... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-006-A11-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675101 ID=EY675101; Name=EY675101; organism=Citrus sinensis; type=EST; length=1004bp
CTGCCAGCTCGCTTGCGGATAGCATCTTATTAATTGTCGCCTTGTGTTTC
CATTCAGTCTTTGAGGGCATTGCAATTGGAGTGGCAGAAACACAAGCTGA
TGCGTGGAAAGCTTTGTGGACAATTTGTTTGCACAAGATATTTGCAGCCA
TTGCAATGGGAATAGCTCTTCTTCGAATGATCCCAGATCGCCCCTTCTTA
TCATGTGTAGCCTATGCATTCGCATTTGCAATTTCTAGTCCAGTTGGTGT
GGCCATAGGTATTATAATTGATGCCACAACTCAAGGTCCTGTGGCGGACT
GGATTTTTGCCATATCAATGGGTTTAGCATGCGGCGTGTTCATTTACGTA
TCTATAAACCATCTGCTATCTAAAGGTTACACACCCCAGAAGACAGTTTC
AGTGGACACACCCAACTATAAGTTCTTAGCTGTAGTGCTGGGTGTTGGAG
TAATCGCCGTTGTGATGATTTGGGACACTTGAAATGCTGAAGTGGGTGCG
TGTCGGGTTCTTGTTTACTTCTGTCTGGCGCACTTTGCTTTTACCTCCAA
ATTATTACAAAAACACCACATTGTTGATGCTCCTTAGGATAGACTTTCAA
GTAAAAACAAAATTGTACCATGGGAAAAAGCAAAAAAAAAAAAAAAAAAA
AAAAAAAAAGGGGGGGCCCCTCCAAAGGAAACCAAAACCTATACTACCCG
TGGCTTGGCAACTCCCATAACCCCTTCATATAAGGGGCACCCAAATTTCA
ATTCCCGGGGCGATCTTTTTAAACACCTCGGAGAGGGGAAAAACCTCGGG
GTGTTCCCAAAATTTAAAGCGATTGGACGAGAAATACCCCCCTTTTACCC
CACGGGGGGAAAAAAAAAACAAAAAAAAGCCCACCCACGCAAAAATCACC
ATTCCACAAAAAAATTACTCACCACACCCCGAGAAAGTGGGAAAAAGGAG
GGAACCACGCCCCCACCAGCCTGTTCACCGCGTGGCTCACTCTTTTTAAA
AAGC
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