EY675055

Overview
NameEY675055
Unique NameEY675055
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1065
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY675055 vs. ExPASy Swiss-Prot
Match: PGTC_SALTY (Phosphoglycerate transport regulatory protein pgtC OS=Salmonella typhimurium GN=pgtC PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 9.210e-30
Identity = 75/221 (33.94%), Postives = 123/221 (55.66%), Query Frame = -1 
Query:  121 APKIPGPVEWKDPRGPPWVGHVGITSPSRLGTMHLTVETILQGEGWDDGWNTLLRMSGNSSAVTERSFGVPDGVNNGQFGAGPVIDFFGLSSKYSKFPVEFVYPSETAIVPANIALIDGAKNTEEGKKFIAFTLSQAGQELLLEPKISRLPVLPYSALGGKVPQGYPDPAEIARRSKVQFNADLSQTRYYVVQSLYDQTVTFRLKELQAATKAIYDAEAKL 783
            A  +P P +W+D   P + G + ++SPSR  T HL VE++LQ +GW  GW TLL +SGN   ++ RSFGV D + +G   AGPVID +  +   +   + F Y   +A+ P  +A++  +++ +E + FI + LS  GQ +L +    + PV P SA   +  Q      +    ++   N  L   R  +VQ ++D  ++FRL +L+ A +A++ AE +L
Sbjct:  122 ARHLPPPADWQDMGLPSYQGALLMSSPSRSDTNHLMVESLLQQKGWTAGWATLLAISGNLVTISSRSFGVADKIKSGLGVAGPVIDNYA-NLLLNDPNLAFTYFPYSAVSPTYVAVLKNSRHADEARAFIHYLLSPKGQRILADANTGKYPVAPLSADNPRAAQ------QQRLMAQPPLNYRLILKRQQLVQRMFDTAISFRLAQLKDAWRALHSAETRL 335
[Close]
BLAST of EY675055 vs. ExPASy Swiss-Prot
Match: PGTC_SALTI (Phosphoglycerate transport regulatory protein pgtC OS=Salmonella typhi GN=pgtC PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 9.210e-30
Identity = 75/221 (33.94%), Postives = 123/221 (55.66%), Query Frame = -1 
Query:  121 APKIPGPVEWKDPRGPPWVGHVGITSPSRLGTMHLTVETILQGEGWDDGWNTLLRMSGNSSAVTERSFGVPDGVNNGQFGAGPVIDFFGLSSKYSKFPVEFVYPSETAIVPANIALIDGAKNTEEGKKFIAFTLSQAGQELLLEPKISRLPVLPYSALGGKVPQGYPDPAEIARRSKVQFNADLSQTRYYVVQSLYDQTVTFRLKELQAATKAIYDAEAKL 783
            A  +P P +W+D   P + G + ++SPSR  T HL VE++LQ +GW  GW TLL +SGN   ++ RSFGV D + +G   AGPVID +  +   +   + F Y   +A+ P  +A++  +++ +E + FI + LS  GQ +L +    + PV P SA   +  Q      +    ++   N  L   R  +VQ ++D  ++FRL +L+ A +A++ AE +L
Sbjct:  122 ARHLPPPADWQDMGLPSYQGALLMSSPSRSDTNHLMVESLLQQKGWTAGWATLLAISGNLVTISSRSFGVADKIKSGLGVAGPVIDNYA-NLLLNDPNLAFTYFPYSAVSPTYVAVLKNSRHADEARAFIHYLLSPKGQRILADANTGKYPVAPLSADNPRAAQ------QQRLMAQPPLNYRLILKRQQLVQRMFDTAISFRLAQLKDAWRALHSAETRL 335
The following BLAST results are available for this feature:
BLAST of EY675055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PGTC_SALTY9.210e-3033.94Phosphoglycerate transport regulatory protein pgtC... [more]
PGTC_SALTI9.210e-3033.94Phosphoglycerate transport regulatory protein pgtC... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-005-D07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675055 ID=EY675055; Name=EY675055; organism=Citrus sinensis; type=EST; length=1065bp
TTTTTTTTTTTTCGGGGGCCGCGGTACGGTCCGGAATTCCGGGTCGACCA
GCGGCGCCCAGGCCAGTTTGCGGGCCTGCGCCAGCAGTTCGGCCGGCTTG
CCGCTCTTGCCCTTGTCGCCGAGCTTGGCCTCGGCGTCGTAGATCGCCTT
GGTCGCCGCCTGCAACTCCTTCAGGCGGAACGTGACGGTCTGGTCGTACA
GCGACTGCACCACGTAATAGCGCGTCTGCGACAGGTCGGCGTTGAACTGC
ACCTTGCTGCGGCGCGCGATCTCGGCGGGATCCGGATAACCCTGCGGCAC
CTTGCCGCCCAGCGCCGAATACGGCAGCACCGGCAGGCGCGAGATCTTCG
GCTCCAGCAGCAGTTCCTGGCCCGCCTGGCTGAGCGTGAAGGCGATGAAC
TTCTTGCCTTCCTCGGTGTTCTTGGCGCCGTCGATCAGCGCGATGTTGGC
CGGCACGATGGCGGTCTCGGAGGGATAGACGAATTCCACCGGGAACTTCG
AATACTTGCTCGACAGGCCGAAGAAGTCGATCACCGGACCCGCGCCGAAC
TGGCCGTTGTTGACGCCGTCCGGCACGCCGAACGAACGCTCGGTGACGGC
GCTGCTGTTGCCCGACATGCGCAGCAGCGTGTTCCAGCCGTCGTCCCAGC
CTTCGCCCTGCAGGATGGTCTCAACCGTCAGGTGCATGGTGCCCAAGCGC
GAAGGCGAGGTGATGCCAACGTGGCCGACCCATGGCGGGCCCCGCGGGTC
TTTCCATTCCACCGGGCCGGGGATCTTGGGGGCCCCCCGATTTAACCCCG
GTGTTTTAAACAAAGCCTAAACCCGGCCCACCCCCGGGCCCAAGTTACTG
CCCCCCCGGGGTCGTTAAAGGGGGTATTTTGCCCAATTTTTGCCCGGGCC
CCTCCTTTTTTTGGGGGAAACTCCCCCCCAAAATTTGGGGCCCAACAACT
TTTGTCCGGGGGCCCCCCCCACCCCTCTAAAAGGGGGGCGCGGGGGGGGG
GGCCGGGGGGCGCCCCAAAAAAAAATTTTTTCTGGGAAGGAAACGGGTGG
GGGGGGGGGGCGGGC
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