EY675053

Overview
NameEY675053
Unique NameEY675053
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length436
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8521 contig Csv1_Contig8521:37..471. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
BLAST of EY675053 vs. ExPASy Swiss-Prot
Match: LFTR_BORPD (Leucyl/phenylalanyl-tRNA--protein transferase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=aat PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 8.437e-49
Identity = 86/119 (72.27%), Postives = 102/119 (85.71%), Query Frame = 3
Query:    6 FATVMAHPSAPRDGQPGTWITAAMRQAYLAWHEAGYVHSIKTWIDGQLAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQHTRHLASLGARPVPHSRFLQHV 362
            F  V+A  +APRDGQ GTWITA M+QAY AWH AG  HS++TWIDG+LAGGLYGI+LGRMFFGESMFTR P+ASK+ALAYLV ++   GV+WIDCQQ TRHLASLGARPVP +RF++H+
Sbjct:  103 FDAVVAQCAAPRDGQAGTWITADMQQAYRAWHAAGVAHSVETWIDGELAGGLYGISLGRMFFGESMFTRVPDASKVALAYLVAFLRRAGVEWIDCQQQTRHLASLGARPVPRARFVEHI 221          

HSP 2 Score: 25.409 bits (54), Expect = 8.437e-49
Identity = 11/18 (61.11%), Postives = 11/18 (61.11%), Query Frame = 1
Query:  382 PPLAWSRGRLDSTGRLLP 435
            P  AW  GRLDS G L P
Sbjct:  228 PAPAWQSGRLDSQGSLHP 245          
BLAST of EY675053 vs. ExPASy Swiss-Prot
Match: LFTR_BORBR (Leucyl/phenylalanyl-tRNA--protein transferase OS=Bordetella bronchiseptica GN=aat PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 4.053e-45
Identity = 80/120 (66.67%), Postives = 100/120 (83.33%), Query Frame = 3
Query:    3 AFATVMAHPSAPRDGQPGTWITAAMRQAYLAWHEAGYVHSIKTWIDGQLAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQHTRHLASLGARPVPHSRFLQHV 362
            AFA V+   +APR GQPGTWI+ A++QAY +WH AG+VHSI+TWIDG+LAGGLYG++LGRMF+GESMF RA +ASKIALA+LV ++    V WIDCQQ T HLA LGARPVP +RF++H+
Sbjct:  102 AFARVLHECAAPRHGQPGTWISPAVQQAYRSWHAAGFVHSIETWIDGELAGGLYGVSLGRMFYGESMFARATDASKIALAHLVAFLRRHQVAWIDCQQQTGHLARLGARPVPRARFIEHI 221          

HSP 2 Score: 26.1794 bits (56), Expect = 4.053e-45
Identity = 11/19 (57.89%), Postives = 12/19 (63.16%), Query Frame = 1
Query:  379 KPPLAWSRGRLDSTGRLLP 435
            +P L W  GRLDS G L P
Sbjct:  227 QPRLPWRSGRLDSAGMLHP 245          
BLAST of EY675053 vs. ExPASy Swiss-Prot
Match: LFTR_BORPA (Leucyl/phenylalanyl-tRNA--protein transferase OS=Bordetella parapertussis GN=aat PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 5.282e-45
Identity = 80/120 (66.67%), Postives = 100/120 (83.33%), Query Frame = 3
Query:    3 AFATVMAHPSAPRDGQPGTWITAAMRQAYLAWHEAGYVHSIKTWIDGQLAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQHTRHLASLGARPVPHSRFLQHV 362
            AFA V+   +APR GQPGTWI+ A++QAY +WH AG+VHSI+TWIDG+LAGGLYG++LGRMF+GESMF RA +ASKIALA+LV ++    V WIDCQQ T HLA LGARPVP +RF++H+
Sbjct:  102 AFARVLHECAAPRHGQPGTWISPAVQQAYHSWHAAGFVHSIETWIDGELAGGLYGVSLGRMFYGESMFARATDASKIALAHLVAFLRRHQVAWIDCQQQTGHLARLGARPVPRARFIEHI 221          

HSP 2 Score: 26.1794 bits (56), Expect = 5.282e-45
Identity = 11/19 (57.89%), Postives = 12/19 (63.16%), Query Frame = 1
Query:  379 KPPLAWSRGRLDSTGRLLP 435
            +P L W  GRLDS G L P
Sbjct:  227 QPRLPWRSGRLDSAGMLHP 245          
BLAST of EY675053 vs. ExPASy Swiss-Prot
Match: LFTR_BORA1 (Leucyl/phenylalanyl-tRNA--protein transferase OS=Bordetella avium (strain 197N) GN=aat PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 3.108e-42
Identity = 81/120 (67.50%), Postives = 93/120 (77.50%), Query Frame = 3
Query:    3 AFATVMAHPSAPRDGQPGTWITAAMRQAYLAWHEAGYVHSIKTWIDGQLAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQHTRHLASLGARPVPHSRFLQHV 362
            AFA VMA  +  RDGQ GTWIT  ++ AY AWHE G  HSI+TWID  L GGLYGI+LG MFFGESMF  A +ASKIALAYLV +++   V WIDCQQ TRHLASLGARP+P ++FLQHV
Sbjct:  102 AFARVMAACAGRRDGQAGTWITPEVQAAYCAWHEQGQAHSIETWIDDHLVGGLYGISLGGMFFGESMFAHATDASKIALAYLVAFLTRHEVDWIDCQQQTRHLASLGARPLPRAQFLQHV 221          
BLAST of EY675053 vs. ExPASy Swiss-Prot
Match: LFTR_LEPCP (Leucyl/phenylalanyl-tRNA--protein transferase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=aat PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.144e-36
Identity = 71/121 (58.68%), Postives = 89/121 (73.55%), Query Frame = 3
Query:    3 AFATVMAHPS-APRDGQPGTWITAAMRQAYLAWHEAGYVHSIKTWIDGQLAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQHTRHLASLGARPVPHSRFLQHV 362
            AFA V+ H S  PR+GQ GTWI   ++ AY+A H AG  HS +TW+DG+L GGLYG+N+GRMF+GESMF R  +ASKIALA LV +  A  + WIDCQ  T HLASLGA+PVP ++F  H+
Sbjct:  102 AFADVIDHCSRTPREGQDGTWIVPEVKAAYVALHRAGSAHSFETWVDGELVGGLYGVNIGRMFYGESMFARRTDASKIALAALVAFCLAHEIAWIDCQMETEHLASLGAQPVPRAQFEAHL 222          
BLAST of EY675053 vs. ExPASy Swiss-Prot
Match: LFTR_CHRVO (Leucyl/phenylalanyl-tRNA--protein transferase OS=Chromobacterium violaceum GN=aat PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.398e-34
Identity = 68/117 (58.12%), Postives = 84/117 (71.79%), Query Frame = 3
Query:    3 AFATVMAHPSAPRDGQPGTWITAAMRQAYLAWHEAGYVHSIKTWIDGQLAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQHTRHLASLGARPVPHSRFL 353
            AF  VM   + PR GQ GTWI   M  AY   H+ GY HS +TWIDG+LAGGLYG+++GRMF+GESMF+R  +ASK+A  ++VR++ AQGV  IDCQ HT HLASLGAR +    FL
Sbjct:   92 AFPEVMRACAEPRAGQDGTWIVPEMVAAYCRLHQIGYAHSFETWIDGELAGGLYGVSIGRMFYGESMFSRRRDASKLAFVHMVRHLQAQGVTMIDCQMHTEHLASLGARLISRDVFL 208          
BLAST of EY675053 vs. ExPASy Swiss-Prot
Match: LFTR_METPP (Leucyl/phenylalanyl-tRNA--protein transferase OS=Methylibium petroleiphilum (strain PM1) GN=aat PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 2.019e-33
Identity = 66/118 (55.93%), Postives = 81/118 (68.64%), Query Frame = 3
Query:    9 ATVMAHPSAPRDGQPGTWITAAMRQAYLAWHEAGYVHSIKTWIDGQLAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQHTRHLASLGARPVPHSRFLQHV 362
            A + A  + PR+GQ GTWI   ++ AY  WH  G VHS +TW+DG+L GGLYG+NLGRMFFGESMF+ A +ASKIALA LV +  A  +  IDCQQ T HL SLGAR +    F  H+
Sbjct:  103 AVIHACATTPREGQDGTWIQPELQAAYTEWHRLGAVHSFETWVDGRLLGGLYGVNLGRMFFGESMFSHATDASKIALAALVAFCRANDIALIDCQQRTAHLGSLGAREIDRPAFEGHL 220          
BLAST of EY675053 vs. ExPASy Swiss-Prot
Match: LFTR_RALPJ (Leucyl/phenylalanyl-tRNA--protein transferase OS=Ralstonia pickettii (strain 12J) GN=aat PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 4.498e-33
Identity = 68/117 (58.12%), Postives = 80/117 (68.38%), Query Frame = 3
Query:   12 TVMAHPSAPRDGQPGTWITAAMRQAYLAWHEAGYVHSIKTWIDGQLAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQHTRHLASLGARPVPHSRFLQHV 362
            T++A  +  R GQ GTWIT  + QAY A H  GY HS++TW  GQ  GGLYG+ LGRMF+GESMF    +ASKIALA L  ++  QGV  IDCQQ T HLASLG  PVP + FL HV
Sbjct:  103 TMVACATTARPGQHGTWITEDVIQAYTALHRRGYAHSVETWHAGQRVGGLYGVALGRMFYGESMFAHRTDASKIALAALCAFLGGQGVAMIDCQQETEHLASLGGAPVPRAAFLAHV 219          
BLAST of EY675053 vs. ExPASy Swiss-Prot
Match: LFTR_HERAR (Leucyl/phenylalanyl-tRNA--protein transferase OS=Herminiimonas arsenicoxydans GN=aat PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 4.498e-33
Identity = 64/117 (54.70%), Postives = 83/117 (70.94%), Query Frame = 3
Query:    3 AFATVMAHPSAPRDGQPGTWITAAMRQAYLAWHEAGYVHSIKTWIDGQLAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQHTRHLASLGARPVPHSRFL 353
            AF  VM   +APR+G+ GTWI+  +   Y   H  GY HS + W+D +L GGLYG+++G MF+GESMFTR  +ASKIALAYLVR++ + GV  IDCQQ T HLASLGA P+  + F+
Sbjct:  103 AFEDVMRACAAPRNGEAGTWISDDIIAGYTRLHRLGYAHSSELWLDDELVGGLYGVSIGNMFYGESMFTRVTDASKIALAYLVRFLGSHGVSMIDCQQQTAHLASLGAMPISRTEFI 219          
BLAST of EY675053 vs. ExPASy Swiss-Prot
Match: LFTR_CUPTR (Leucyl/phenylalanyl-tRNA--protein transferase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=aat PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.709e-32
Identity = 67/118 (56.78%), Postives = 81/118 (68.64%), Query Frame = 3
Query:    9 ATVMAHPSAPRDGQPGTWITAAMRQAYLAWHEAGYVHSIKTWIDGQLAGGLYGINLGRMFFGESMFTRAPNASKIALAYLVRYVSAQGVQWIDCQQHTRHLASLGARPVPHSRFLQHV 362
            A + A  S PR+GQ GTWIT A+  AY A H  G  HS+++W  G+  GGLYG+ LGRMFFGESMF    +ASKIALA L  ++   GV  IDCQQ T HLASLGARP+P + F+ HV
Sbjct:  102 AVMRACASTPREGQDGTWITDAIIAAYGALHRNGLAHSVESWYRGERVGGLYGVALGRMFFGESMFAHRTDASKIALAALCAFLGNHGVAMIDCQQETDHLASLGARPIPRAEFVAHV 219          
The following BLAST results are available for this feature:
BLAST of EY675053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 305
Match NameE-valueIdentityDescription
LFTR_BORPD8.437e-4972.27Leucyl/phenylalanyl-tRNA--protein transferase OS=B... [more]
LFTR_BORBR4.053e-4566.67Leucyl/phenylalanyl-tRNA--protein transferase OS=B... [more]
LFTR_BORPA5.282e-4566.67Leucyl/phenylalanyl-tRNA--protein transferase OS=B... [more]
LFTR_BORA13.108e-4267.50Leucyl/phenylalanyl-tRNA--protein transferase OS=B... [more]
LFTR_LEPCP1.144e-3658.68Leucyl/phenylalanyl-tRNA--protein transferase OS=L... [more]
LFTR_CHRVO1.398e-3458.12Leucyl/phenylalanyl-tRNA--protein transferase OS=C... [more]
LFTR_METPP2.019e-3355.93Leucyl/phenylalanyl-tRNA--protein transferase OS=M... [more]
LFTR_RALPJ4.498e-3358.12Leucyl/phenylalanyl-tRNA--protein transferase OS=R... [more]
LFTR_HERAR4.498e-3354.70Leucyl/phenylalanyl-tRNA--protein transferase OS=H... [more]
LFTR_CUPTR1.709e-3256.78Leucyl/phenylalanyl-tRNA--protein transferase OS=C... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-005-D04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675053 ID=EY675053; Name=EY675053; organism=Citrus sinensis; type=EST; length=436bp
CGGCCTTCGCCACGGTGATGGCGCACCCCTCCGCGCCGCGCGATGGCCAG
CCGGGCACCTGGATCACCGCCGCCATGCGGCAGGCCTACCTCGCCTGGCA
CGAGGCCGGCTACGTCCACAGCATCAAAACCTGGATCGACGGCCAACTGG
CCGGCGGCCTGTACGGCATCAACCTGGGCCGCATGTTCTTCGGCGAATCG
ATGTTCACGCGCGCGCCCAACGCCTCCAAGATCGCGCTGGCCTACCTGGT
GCGCTACGTCAGCGCGCAAGGCGTGCAGTGGATCGACTGCCAACAACATA
CCCGCCATCTGGCCAGCCTGGGCGCGCGGCCGGTGCCACACTCGCGCTTC
CTGCAACACGTGCGCGCCGCCGCCGTGCAAGCCGCCGCTGGCCTGGTCGC
GCGGACGGCTGGACAGCACCGGGCGGCTGCTGCCCC
back to top