EY675042
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675042 vs. ExPASy Swiss-Prot
Match: MED31_ARATH (Mediator of RNA polymerase II transcription subunit 31 OS=Arabidopsis thaliana GN=At5g19910 PE=2 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 6.560e-62 Identity = 105/122 (86.07%), Postives = 115/122 (94.26%), Query Frame = 3 Query: 18 EEASDAPSSPKKVHKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPANKELAHRQQFFFWKNYKNNQLRHI 383 ++AS+ PS PK +KDPD GRQRFLLELEF+QCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQN NFR AMAHPANKELAHRQQF++WKNY+NN+L+HI Sbjct: 9 DDASEIPSPPKNTYKDPDGGRQRFLLELEFIQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNPNFRTAMAHPANKELAHRQQFYYWKNYRNNRLKHI 130 HSP 2 Score: 22.3274 bits (46), Expect = 6.560e-62 Identity = 11/18 (61.11%), Postives = 12/18 (66.67%), Query Frame = 2 Query: 458 PVPTPVTAASGPTLSPMQ 511 P P+ TAA P LSPMQ Sbjct: 153 PAPS-ATAALSPALSPMQ 169
BLAST of EY675042 vs. ExPASy Swiss-Prot
Match: MED31_DICDI (Putative mediator of RNA polymerase II transcription subunit 31 OS=Dictyostelium discoideum GN=med31 PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 3.425e-32 Identity = 56/97 (57.73%), Postives = 77/97 (79.38%), Query Frame = 3 Query: 84 RFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPANKELAHRQQFFFWKNYKNNQL 374 RF++ELEF+QCL+NP Y++YLAQNRYF+D+AF+ YL YLQYW++PEY KFI+YP LYFL+LLQ FR + H + + H QQF+ W+ Y+NN++ Sbjct: 55 RFIMELEFIQCLSNPRYLNYLAQNRYFQDKAFVNYLVYLQYWKKPEYAKFIVYPQSLYFLDLLQEERFRQELNHSQSTDFIHEQQFYHWQYYRNNRM 151
BLAST of EY675042 vs. ExPASy Swiss-Prot
Match: MED31_DANRE (Mediator of RNA polymerase II transcription subunit 31 OS=Danio rerio GN=med31 PE=2 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 3.668e-26 Identity = 52/108 (48.15%), Postives = 70/108 (64.81%), Query Frame = 3 Query: 54 VHKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPANKELAHRQQFFFWKNYKNNQLR 377 V + + RQRF LELEFVQCLANP Y+++LAQ Y ++ F+ YLKYL YW+ PEY KF+ YPHCL+ LELLQ +FR + + + QQ W++Y + R Sbjct: 4 VMETDEQARQRFQLELEFVQCLANPNYLNFLAQRGYLREKPFVNYLKYLLYWKEPEYAKFLKYPHCLHMLELLQYEHFRKELVNAQCAKFIDEQQILHWQHYSRKRTR 111
BLAST of EY675042 vs. ExPASy Swiss-Prot
Match: MED31_BOVIN (Mediator of RNA polymerase II transcription subunit 31 OS=Bos taurus GN=MED31 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 3.668e-26 Identity = 52/105 (49.52%), Postives = 70/105 (66.67%), Query Frame = 3 Query: 63 DPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPANKELAHRQQFFFWKNYKNNQLR 377 D R RF LELEFVQCLANP Y+++LAQ YF+D+AF+ YLKYL YW+ PEY K++ YP CL+ LELLQ +FR + + + QQ W++Y ++R Sbjct: 10 DDAGNRLRFQLELEFVQCLANPNYLNFLAQRGYFKDKAFVNYLKYLLYWKEPEYAKYLKYPQCLHMLELLQYEHFRKELVNAQCAKFIDEQQILHWQHYSRKRMR 114
BLAST of EY675042 vs. ExPASy Swiss-Prot
Match: MED31_MOUSE (Mediator of RNA polymerase II transcription subunit 31 OS=Mus musculus GN=Med31 PE=1 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 4.790e-26 Identity = 52/105 (49.52%), Postives = 70/105 (66.67%), Query Frame = 3 Query: 63 DPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPANKELAHRQQFFFWKNYKNNQLR 377 D R RF LELEFVQCLANP Y+++LAQ YF+D+AF+ YLKYL YW+ PEY K++ YP CL+ LELLQ +FR + + + QQ W++Y ++R Sbjct: 10 DDAGNRLRFQLELEFVQCLANPNYLNFLAQRGYFKDKAFVNYLKYLLYWKEPEYAKYLKYPQCLHMLELLQYEHFRKELVNAQCAKFIDEQQILHWQHYSRKRVR 114
BLAST of EY675042 vs. ExPASy Swiss-Prot
Match: MED31_HUMAN (Mediator of RNA polymerase II transcription subunit 31 OS=Homo sapiens GN=MED31 PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 6.256e-26 Identity = 52/105 (49.52%), Postives = 70/105 (66.67%), Query Frame = 3 Query: 63 DPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPANKELAHRQQFFFWKNYKNNQLR 377 D R RF LELEFVQCLANP Y+++LAQ YF+D+AF+ YLKYL YW+ PEY K++ YP CL+ LELLQ +FR + + + QQ W++Y ++R Sbjct: 10 DDAGNRLRFQLELEFVQCLANPNYLNFLAQRGYFKDKAFVNYLKYLLYWKDPEYAKYLKYPQCLHMLELLQYEHFRKELVNAQCAKFIDEQQILHWQHYSRKRMR 114
BLAST of EY675042 vs. ExPASy Swiss-Prot
Match: MED31_XENTR (Mediator of RNA polymerase II transcription subunit 31 OS=Xenopus tropicalis GN=med31 PE=2 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 3.105e-25 Identity = 50/100 (50.00%), Postives = 69/100 (69.00%), Query Frame = 3 Query: 78 RQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPANKELAHRQQFFFWKNYKNNQLR 377 R RF LELEFVQCLANP Y+++LAQ YF+D++F+ YLKYL YW+ PEY K++ YP CL+ LELLQ +FR + + + QQ W++Y ++R Sbjct: 12 RIRFQLELEFVQCLANPNYLNFLAQRGYFKDKSFVNYLKYLLYWKDPEYAKYLKYPQCLHMLELLQYEHFRKELVNAQCAKFIDEQQILHWQHYSRKRMR 111
BLAST of EY675042 vs. ExPASy Swiss-Prot
Match: MD31B_XENLA (Mediator of RNA polymerase II transcription subunit 31-B OS=Xenopus laevis GN=med31-B PE=2 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 3.105e-25 Identity = 50/100 (50.00%), Postives = 69/100 (69.00%), Query Frame = 3 Query: 78 RQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPANKELAHRQQFFFWKNYKNNQLR 377 R RF LELEFVQCLANP Y+++LAQ YF+D++F+ YLKYL YW+ PEY K++ YP CL+ LELLQ +FR + + + QQ W++Y ++R Sbjct: 13 RIRFQLELEFVQCLANPNYLNFLAQRGYFKDKSFVNYLKYLLYWKDPEYAKYLKYPQCLHMLELLQYEHFRKELVNAQCAKFIDEQQILHWQHYSRKRMR 112
BLAST of EY675042 vs. ExPASy Swiss-Prot
Match: MD31A_XENLA (Mediator of RNA polymerase II transcription subunit 31-A OS=Xenopus laevis GN=med31-A PE=2 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 6.917e-25 Identity = 49/100 (49.00%), Postives = 68/100 (68.00%), Query Frame = 3 Query: 78 RQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPANKELAHRQQFFFWKNYKNNQLR 377 R RF LELEFVQCLANP Y+++LAQ YF+D+ F+ Y+KYL YW+ PEY K++ YP CL+ LELLQ +FR + + + QQ W++Y ++R Sbjct: 12 RIRFQLELEFVQCLANPNYLNFLAQRGYFKDKPFVNYMKYLLYWKEPEYAKYLKYPQCLHMLELLQYEHFRKELVNAQCAKFIDEQQILHWQHYSRKRVR 111
BLAST of EY675042 vs. ExPASy Swiss-Prot
Match: MED31_DROME (Mediator of RNA polymerase II transcription subunit 31 OS=Drosophila melanogaster GN=MED31 PE=1 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 3.433e-24 Identity = 47/102 (46.08%), Postives = 73/102 (71.57%), Query Frame = 3 Query: 78 RQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPANKELAHRQQFFFWKNYKNNQLRHI 383 ++R+ +ELEFVQCL+NP Y+++LAQ +F+D++FI YLKYLQYW+ P+Y K++MYP CLYFL+LLQ +FR + + + Q W++Y +++ I Sbjct: 19 KRRWQIELEFVQCLSNPNYLNFLAQRGFFKDQSFINYLKYLQYWKEPDYAKYLMYPMCLYFLDLLQYEHFRREIVNSQCCKFIDDQAILQWQHYTRKRIKLI 120 The following BLAST results are available for this feature:
BLAST of EY675042 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >EY675042 ID=EY675042; Name=EY675042; organism=Citrus sinensis; type=EST; length=1078bpback to top |