EY675039

Overview
NameEY675039
Unique NameEY675039
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1015
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 1.011e-59
Identity = 98/148 (66.22%), Postives = 110/148 (74.32%), Query Frame = 2
Query:   74 HANG--GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG--RHQVHNH 505
            H NG  GGGW+NA ATFY              YGNLYSQGYGTNTAALSTALFNNGLSCG+C+EI+C ND KWCLPG+I+VTATNFC          GGWCNPPQQHFDLSQPVFQ IAQYRAG+VPV Y+RVPC ++G  R  ++ H
Sbjct:   18 HVNGYAGGGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRCQNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQRIAQYRAGIVPVAYRRVPCVRRGGIRFTINGH 165          

HSP 2 Score: 40.817 bits (94), Expect = 1.011e-59
Identity = 24/48 (50.00%), Postives = 31/48 (64.58%), Query Frame = 1
Query:  514 SYFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWGPKTGQTNTY 657
            SYF+ +LITNVGGAGDVH     KG + G     + NWG +  Q+N+Y
Sbjct:  166 SYFNLVLITNVGGAGDVHSAM-VKGSRTGWQAMSR-NWG-QNWQSNSY 210          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 1.304e-56
Identity = 93/142 (65.49%), Postives = 107/142 (75.35%), Query Frame = 2
Query:   86 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG--RHQVHNH 505
            GGGWINA ATFY              YGNLYSQGYGT+TAALSTALFNNGLSCGSC+EI+C ND KWCLPG+I+VTATNFC          GGWCNPP +HFDL+QPVFQ IAQYRAG+VPV+Y+RVPC ++G  R  ++ H
Sbjct:   23 GGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGSCFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNPPLEHFDLAQPVFQRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGH 164          

HSP 2 Score: 37.7354 bits (86), Expect = 1.304e-56
Identity = 23/48 (47.92%), Postives = 30/48 (62.50%), Query Frame = 1
Query:  514 SYFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWGPKTGQTNTY 657
            SYF+ +LITNVGGAGDVH     KG +  +      NWG +  Q+N+Y
Sbjct:  165 SYFNLVLITNVGGAGDVHSA-AIKGSRT-VWQAMSRNWG-QNWQSNSY 209          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 2.851e-53
Identity = 90/140 (64.29%), Postives = 102/140 (72.86%), Query Frame = 2
Query:   92 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG--RHQVHNH 505
            GW+NA ATFY              YGNLYSQGYGTNTAALSTALFNNGLSCG+C+EIKC +D  WCLPG I+VTATNFC          GGWCNPP  HFDLSQPVFQ IAQY+AGVVPV+Y+RVPC ++G  R  ++ H
Sbjct:   29 GWVNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCQSDGAWCLPGAIIVTATNFCPPNNALPNNAGGWCNPPLHHFDLSQPVFQRIAQYKAGVVPVSYRRVPCMRRGGIRFTINGH 168          

HSP 2 Score: 35.039 bits (79), Expect = 2.851e-53
Identity = 14/20 (70.00%), Postives = 18/20 (90.00%), Query Frame = 1
Query:  514 SYFHPMLITNVGGAGDVHGL 573
            SYF+ +L+TNVGGAGDVH +
Sbjct:  169 SYFNLVLVTNVGGAGDVHSV 188          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 4.040e-52
Identity = 85/141 (60.28%), Postives = 98/141 (69.50%), Query Frame = 2
Query:   89 GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG--RHQVHNH 505
            GGW    ATFY              YGNLY QGYGTNTAALSTALFNNGL+CG+CYE+KC +DP+WCL  TI VTATNFC          GGWCNPP QHFDL++P F  IAQYRAG+VPV+++RVPC KKG  R  ++ H
Sbjct:   28 GGWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTNTAALSTALFNNGLTCGACYEMKCNDDPRWCLGSTITVTATNFCPPNPGLSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRFTINGH 168          

HSP 2 Score: 40.817 bits (94), Expect = 4.040e-52
Identity = 23/48 (47.92%), Postives = 30/48 (62.50%), Query Frame = 1
Query:  514 SYFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWGPKTGQTNTY 657
            SYF+ +LI+NVGGAGDVH +   KG K         NWG +  Q+N+Y
Sbjct:  169 SYFNLVLISNVGGAGDVHAV-SIKGSKTQSWQAMSRNWG-QNWQSNSY 214          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.153e-50
Identity = 87/140 (62.14%), Postives = 100/140 (71.43%), Query Frame = 2
Query:   92 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG--RHQVHNH 505
            GW+NARATFY              YGNLYSQGYGTNTAALSTALFN G SCG+C++IKCV+DPKWC+ GTI VT TNFC          GGWCNPPQ HFDL+QP+F  IAQY+AGVVPV Y+RV C +KG  R  ++ H
Sbjct:   28 GWVNARATFYGGADASGTMGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQIKCVDDPKWCIGGTITVTGTNFCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIAQYKAGVVPVQYRRVACRRKGGIRFTINGH 167          

HSP 2 Score: 29.6462 bits (65), Expect = 2.153e-50
Identity = 13/17 (76.47%), Postives = 15/17 (88.24%), Query Frame = 1
Query:  514 SYFHPMLITNVGGAGDV 564
            SYF+ +LITNV GAGDV
Sbjct:  168 SYFNLVLITNVAGAGDV 184          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.057e-49
Identity = 86/145 (59.31%), Postives = 101/145 (69.66%), Query Frame = 2
Query:   77 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG--RHQVHNH 505
            A G GGW +A ATFY              YGNLYSQGYGTNTAALSTALFN+G +CGSCYE++C N    CLPG+I VTATNFC          GGWCNPP+ HFD+++P F HIAQYRAG+VPV+++RVPC KKG  R  V+ H
Sbjct:   18 AAGYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGH 162          

HSP 2 Score: 35.8094 bits (81), Expect = 1.057e-49
Identity = 21/48 (43.75%), Postives = 29/48 (60.42%), Query Frame = 1
Query:  514 SYFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWGPKTGQTNTY 657
            SYF+ +L+TNV GAGDV  +   KG + G   P   NWG +  Q+N +
Sbjct:  163 SYFNLVLVTNVAGAGDVRSV-SIKGSRTG-WQPMSRNWG-QNWQSNAF 207          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.057e-49
Identity = 86/145 (59.31%), Postives = 101/145 (69.66%), Query Frame = 2
Query:   77 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG--RHQVHNH 505
            A G GGW +A ATFY              YGNLYSQGYGTNTAALSTALFN+G +CGSCYE++C N    CLPG+I VTATNFC          GGWCNPP+ HFD+++P F HIAQYRAG+VPV+++RVPC KKG  R  V+ H
Sbjct:   18 AAGYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGH 162          

HSP 2 Score: 35.8094 bits (81), Expect = 1.057e-49
Identity = 21/48 (43.75%), Postives = 29/48 (60.42%), Query Frame = 1
Query:  514 SYFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWGPKTGQTNTY 657
            SYF+ +L+TNV GAGDV  +   KG + G   P   NWG +  Q+N +
Sbjct:  163 SYFNLVLVTNVAGAGDVRSV-SIKGSRTG-WQPMSRNWG-QNWQSNAF 207          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXPA2_ARATH (Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 3.040e-49
Identity = 74/137 (54.01%), Postives = 95/137 (69.34%), Query Frame = 2
Query:   74 HANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
            +++  GGW    ATFY              YGNL+SQGYG  TAALSTALFN+G  CG+C+E++C +DP+WC+PG+I+V+ATNFC          GGWCNPP +HFDL++P F  IAQYRAG+VPV ++RVPC K G
Sbjct:   25 NSDDNGGWERGHATFYGGADASGTMGGACGYGNLHSQGYGLQTAALSTALFNSGQKCGACFELQCEDDPEWCIPGSIIVSATNFCPPNFALANDNGGWCNPPLKHFDLAEPAFLQIAQYRAGIVPVAFRRVPCEKGG 161          

HSP 2 Score: 38.5058 bits (88), Expect = 3.040e-49
Identity = 22/47 (46.81%), Postives = 27/47 (57.45%), Query Frame = 1
Query:  517 YFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWGPKTGQTNTY 657
            YF  +LITNVGGAGD+  +   KG K         NWG +  Q+NTY
Sbjct:  172 YFDLVLITNVGGAGDIRAV-SLKGSKTDQWQSMSRNWG-QNWQSNTY 216          

HSP 3 Score: 27.335 bits (59), Expect = 3.040e-49
Identity = 14/23 (60.87%), Postives = 15/23 (65.22%), Query Frame = 3
Query:  468 PAEKRGGIRFTIIGHFLLPPYVD 536
            P EK GGIRFTI G+    PY D
Sbjct:  156 PCEKGGGIRFTINGN----PYFD 174          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 3.973e-49
Identity = 86/144 (59.72%), Postives = 103/144 (71.53%), Query Frame = 2
Query:   86 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG--RHQVHNH 505
            GG W NA ATFY              YGNLYSQGYGTNTAALSTALFNNG+SCG+C+E+KC NDP+WC  G  +I++TATNFC          GGWCNPP++HFDL+ PVF  IAQYRAG+VPV+Y+RVPC K+G  R  ++ H
Sbjct:   28 GGAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGH 171          

HSP 2 Score: 28.1054 bits (61), Expect = 3.973e-49
Identity = 17/38 (44.74%), Postives = 23/38 (60.53%), Query Frame = 1
Query:  517 YFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWG 630
            YF+ +LITNV GAGD+      KG + G  +  + NWG
Sbjct:  173 YFNLVLITNVAGAGDIVRA-SVKGSRTGWMSLSR-NWG 208          
BLAST of EY675039 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.916e-48
Identity = 82/135 (60.74%), Postives = 96/135 (71.11%), Query Frame = 2
Query:   86 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVTYKRVPCGKKG 484
            GG W NA ATFY              YGNLYSQGYG NTAALSTALFNNG SCG+C+EIKC +DP+WC+PG  +I+VTATNFC          GGWCNPP++HFDL+ P+F  I  YRAG+VPV+Y+RVPC K G
Sbjct:   33 GGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHFDLAMPMFLKIGLYRAGIVPVSYRRVPCRKIG 167          

HSP 2 Score: 31.187 bits (69), Expect = 1.916e-48
Identity = 17/38 (44.74%), Postives = 23/38 (60.53%), Query Frame = 1
Query:  517 YFHPMLITNVGGAGDVHGLFPSKGPKIGLGTPGQENWG 630
            YF+ +L+TNV GAGD++G+   KG K         NWG
Sbjct:  178 YFNLVLVTNVAGAGDINGV-SVKGSKTD-WVRMSRNWG 213          

HSP 3 Score: 22.7126 bits (47), Expect = 1.916e-48
Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 3
Query:  468 PAEKRGGIRFTIIG 509
            P  K GGIRFT+ G
Sbjct:  162 PCRKIGGIRFTVNG 175          
The following BLAST results are available for this feature:
BLAST of EY675039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
EXPA1_ARATH1.011e-5966.22Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 ... [more]
EXP10_ARATH1.304e-5665.49Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=... [more]
EXP15_ARATH2.851e-5364.29Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=... [more]
EXPA8_ARATH4.040e-5260.28Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 ... [more]
EXP14_ARATH2.153e-5062.14Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=... [more]
EXPA4_ORYSJ1.057e-4959.31Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA4_ORYSI1.057e-4959.31Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4... [more]
EXPA2_ARATH3.040e-4954.01Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 ... [more]
EXPA4_ARATH3.973e-4959.72Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 ... [more]
EXPA3_ARATH1.916e-4860.74Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-005-B08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675039 ID=EY675039; Name=EY675039; organism=Citrus sinensis; type=EST; length=1015bp
GCTTCCATTTCTCCACAAAATGTATTTTGCTGGGTTTTTCTCGTTGGGTT
TCCTTGCATTGGTGTCCTCCGTTCATGCTAATGGAGGCGGTGGGTGGATC
AATGCTCGTGCCACTTTCTATGGTGGTGGCGATGCTTCAGGGACTATGGG
TGGGGCTTGTGGCTATGGGAATCTGTATAGCCAGGGTTATGGAACGAACA
CTGCAGCCTTGAGCACGGCTTTGTTCAACAACGGTTTGAGCTGTGGGTCT
TGCTATGAGATTAAGTGTGTTAATGACCCCAAATGGTGCTTGCCCGGCAC
CATTATGGTCACAGCTACCAATTTTTGCCCACCGAACAACGCCCTCCCCA
ACAATGCAGGCGGTTGGTGCAATCCTCCGCAGCAACATTTTGATCTCTCT
CAGCCTGTGTTCCAACACATTGCTCAATACAGAGCTGGAGTTGTCCCTGT
AACTTACAAGAGGGTACCCTGCGGAAAAAAGGGGAGGCATCAGGTTCACA
ATCATTGGCCATTTCCTACTTCCACCCTATGTTGATCACCAACGTTGGTG
GTGCTGGTGATGTTCATGGCCTGTTTCCATCCAAAGGTCCTAAAATTGGG
CTGGGAACCCCTGGTCAAGAAAACTGGGGGCCAAAAACCGGGCAAACCAA
CACTTATTCTCAATGGGCCCAAAGGCCGGTTCTTTTAAAGGGCCACCCCA
AGCCAAGGCCCCCCCTTTGTGAACTTTCCCATCAAATGTTTGGCCCCCGG
CCTAACCGGGTCCTTTTGGCCAAAAATTTACCTCCGGGGGCTCCATTTTC
CCCCTTAAAACCCCCCCAAAAAACCAATAAAAAAAATTGGGGGTTTTTAT
AAACCCCTTTTTTTTTAACCACAAAAAAATTTGCGGTGGTCATAAAAGAT
TGAAAAATATTTTTTTTTGATAATAAAAAAAAAATTTTTTTTCCACCCCC
ACCTAAAGGGGAGGGGTTAATTTTAAATAATATTTTATTTTAAAATATAA
TAAAATAATATAATA
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