EY674794

Overview
NameEY674794
Unique NameEY674794
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1050
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: DDH_HAEIN (2-hydroxyacid dehydrogenase homolog OS=Haemophilus influenzae GN=ddh PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.539e-45
Identity = 64/124 (51.61%), Postives = 85/124 (68.55%), Query Frame = 3
Query:   12 QRLGLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVEALGARYVSLHELLGESQIISLHCPLTADS 383
            Q LG+ +VRVPAYSP AVAEH + L++ LNRR+HRAY RTR+ +FSL GL GF++           +IG    +I+ GFG  +LAYDP+ NP VE LG +YV L EL  +S +I+LHCP T ++
Sbjct:   88 QELGIQVVRVPAYSPEAVAEHTIGLMMTLNRRIHRAYQRTREANFSLEGLIGFNMYGRTVGVIGTGKIGIAVMRILKGFGMNILAYDPFKNPVVEELGGQYVELDELYAKSHVITLHCPATPEN 211          

HSP 2 Score: 65.855 bits (159), Expect = 1.539e-45
Identity = 29/57 (50.88%), Postives = 40/57 (70.18%), Query Frame = 1
Query:  388 HLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKKAPLFFQ 558
            HL+N ++ A M+ G M++NT RG L+DT A I ALK   +G LG+DVYE +  LFF+
Sbjct:  213 HLLNCEAFAKMKDGVMIVNTSRGSLIDTQAAIDALKQRKIGALGMDVYENERDLFFE 269          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: LDHD_ECOLI (D-lactate dehydrogenase OS=Escherichia coli (strain K12) GN=ldhA PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.812e-44
Identity = 65/124 (52.42%), Postives = 83/124 (66.94%), Query Frame = 3
Query:   12 QRLGLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVEALGARYVSLHELLGESQIISLHCPLTADS 383
            + LGL +VRVPAY P AVAEHA+ +++ LNRR+HRAY RTRD +FSL GLTGF +           +IG    +I+ GFG +LLA+DPYP+     LG  YV L  L  ES +ISLHCPLT ++
Sbjct:   88 KELGLKVVRVPAYDPEAVAEHAIGMMMTLNRRIHRAYQRTRDANFSLEGLTGFTMYGKTAGVIGTGKIGVAMLRILKGFGMRLLAFDPYPSAAALELGVEYVDLPTLFSESDVISLHCPLTPEN 211          

HSP 2 Score: 61.6178 bits (148), Expect = 4.812e-44
Identity = 27/57 (47.37%), Postives = 39/57 (68.42%), Query Frame = 1
Query:  388 HLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKKAPLFFQ 558
            HL+N  +   M+ G M++NT RG L+D+ A I ALK+  +G LG+DVYE +  LFF+
Sbjct:  213 HLLNEAAFEQMKNGVMIVNTSRGALIDSQAAIEALKNQKIGSLGMDVYENERDLFFE 269          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: DDH_ZYMMO (2-hydroxyacid dehydrogenase homolog OS=Zymomonas mobilis GN=ddh PE=3 SV=3)

HSP 1 Score: 115.931 bits (289), Expect = 9.325e-39
Identity = 57/126 (45.24%), Postives = 85/126 (67.46%), Query Frame = 3
Query:   12 QRLGLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAKIMA-GFGCQLLAYDPYPNPQV-EALGARYVSLHELLGESQIISLHCPLTADS 383
            ++L + +VRVPAYSP++VAE+AV ++L LNR++ R   R R+ +FSL GL G D+            IG+ FA IM  GFG  ++AY P+P+P++ + +G R+ SL E++  S IISLHCPLT ++
Sbjct:   88 KKLNIKVVRVPAYSPYSVAEYAVGMLLTLNRQISRGLKRVRENNFSLEGLIGLDVHDKTVGIIGVGHIGSVFAHIMTHGFGANVIAYKPHPDPELAKKVGFRFTSLDEVIETSDIISLHCPLTPEN 213          

HSP 2 Score: 66.6254 bits (161), Expect = 9.325e-39
Identity = 31/57 (54.39%), Postives = 41/57 (71.93%), Query Frame = 1
Query:  388 HLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKKAPLFFQ 558
            H+IN ++LA  + G  L+NT RGGLVDT A+I +LK  HLG    DVYE++ PLFF+
Sbjct:  215 HMINEETLARAKKGFYLVNTSRGGLVDTKAVIKSLKAKHLGGYAADVYEEEGPLFFE 271          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: DDH1_SCHPO (2-hydroxyacid dehydrogenase homolog 1 OS=Schizosaccharomyces pombe GN=SPAC186.07c PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.062e-38
Identity = 57/123 (46.34%), Postives = 84/123 (68.29%), Query Frame = 3
Query:   21 GLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAK-IMAGFGCQLLAYDPYPNPQVEALGARYVSLHELLGESQIISLHCPLTADSK 386
            G+ +VRVPAYSP+AVAE+ + L+L+LNR++HRAY R R+ DF+L+GL G DL           +IG   AK +  GFGC++LA+D  PN ++E  G ++V   E+L ++  + LHCPLT D++
Sbjct:   91 GITVVRVPAYSPYAVAEYTIGLLLSLNRKIHRAYVRVREDDFNLNGLLGHDLHGKTIGLLGTGRIGGLVAKCLKLGFGCEVLAHDIKPNKELEKFGIQFVEQQEVLAKADFLCLHCPLTPDTE 213          

HSP 2 Score: 60.077 bits (144), Expect = 2.062e-38
Identity = 27/58 (46.55%), Postives = 41/58 (70.69%), Query Frame = 1
Query:  385 KHLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKKAPLFFQ 558
            +HL++ + LA M+ G  +INT RGGLVDT AL+ A++ G +G   +DVYE +  LF++
Sbjct:  213 EHLVDEKLLASMKKGVKIINTSRGGLVDTKALVKAIESGQVGGCAMDVYEGERRLFYR 270          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: DDH2_SCHPO (2-hydroxyacid dehydrogenase homolog 2 OS=Schizosaccharomyces pombe GN=SPAC186.02c PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 8.074e-34
Identity = 51/118 (43.22%), Postives = 76/118 (64.41%), Query Frame = 3
Query:   24 LPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAK-IMAGFGCQLLAYDPYPNPQVEALGARYVSLHELLGESQIISLHCPLT 374
            + +V VP+YSP AV+E  V L+L+LNR++HRAY R R+ DF++ GL G D+           +IG+  AK    GFGC +LAYD  P+ ++E  G ++V  +E+L ++  + LHCPLT
Sbjct:   92 ITVVHVPSYSPFAVSEFTVGLLLSLNRKIHRAYVRVREDDFNIVGLLGCDIHGKTVGVIGTGKIGSNVAKCFKMGFGCDVLAYDINPDKKLENYGVQFVEQNEVLKKADFLCLHCPLT 209          

HSP 2 Score: 61.2326 bits (147), Expect = 8.074e-34
Identity = 26/57 (45.61%), Postives = 40/57 (70.18%), Query Frame = 1
Query:  388 HLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKKAPLFFQ 558
            H++N+ SLA M+ G  ++NT RGGL+DT AL+ A+  G +G   +DVYE +  LF++
Sbjct:  214 HIVNSDSLALMKKGVTIVNTSRGGLIDTKALVDAIDSGQVGGCAIDVYEGERNLFYK 270          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: LDHD_DICDI (Putative D-lactate dehydrogenase OS=Dictyostelium discoideum GN=ldhA PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.476e-32
Identity = 51/126 (40.48%), Postives = 84/126 (66.67%), Query Frame = 3
Query:   15 RLGLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAKIM-AGFGCQLLAYDPYPNPQVEALGARYV-SLHELLGESQIISLHCPLTADSK 386
            +LG+P++RVPAYSP+AV+E+A++LI+ALNR+ H+A++R RD +F ++G+ GF++            IG    +++  GFG +++AYD   N  V  +G  YV +L E+  +  +ISLH PL + +K
Sbjct:   88 KLGIPVLRVPAYSPNAVSEYALSLIMALNRKTHKAHDRVRDANFEINGMEGFNMVSKVYGIVGTGNIGEQLCRVLKLGFGAKVIAYDIIENKAVTDIGIEYVKTLDEIWKQCDVISLHTPLNSQTK 213          

HSP 2 Score: 55.0694 bits (131), Expect = 1.476e-32
Identity = 24/58 (41.38%), Postives = 37/58 (63.79%), Query Frame = 1
Query:  385 KHLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKKAPLFFQ 558
            K+++N++S+  M+ G M+IN  RG LV+    I  LK G +  LG+DVYE +   F+Q
Sbjct:  213 KYMVNSESIEKMRDGVMIINVSRGALVNASDAIVGLKSGKISSLGMDVYENETDYFYQ 270          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: LDHD_TREPA (D-lactate dehydrogenase OS=Treponema pallidum GN=ldhD PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.902e-22
Identity = 43/122 (35.25%), Postives = 61/122 (50.00%), Query Frame = 3
Query:   21 GLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLH-GLTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVEALGARYVSLHELLGESQIISLHCPLTADS 383
            G+ +  VP+YSP+A+ E+A+A  L L R         R  DF     +   +L           +IG   A++  G G Q++ +DPYPN   +     YVS+ ELL  S +ISLH P T DS
Sbjct:   92 GIRLTNVPSYSPNAIGEYALAAALQLTRHAREIETFVRKRDFRWQKPILSKELRCSRVGILGTGRIGQAAARLFKGVGAQVVGFDPYPNDAAKE-WLTYVSMDELLSTSDVISLHMPATKDS 212          

HSP 2 Score: 52.7582 bits (125), Expect = 3.902e-22
Identity = 23/53 (43.40%), Postives = 35/53 (66.04%), Query Frame = 1
Query:  388 HLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKKAP 546
            HLINA+++A M+ G  L+NT RG ++D+ AL+ +L  G +    LD YE + P
Sbjct:  214 HLINAKTIAQMKDGVYLVNTARGAVIDSQALLDSLDKGKIAGAALDAYEFEGP 266          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: VANH_ENTFA (D-specific alpha-keto acid dehydrogenase OS=Enterococcus faecalis GN=vanHB PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 5.422e-21
Identity = 43/125 (34.40%), Postives = 64/125 (51.20%), Query Frame = 3
Query:   12 QRLGLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVEALGARYVSLHELLGESQIISLHCPLTADSK 386
            +R+G+ +  V AYSP +VA++A+ L+L   R      +     +F L  + G +L            IG    K + GFGC++LAYD         + A YV L ELL  S I++LH PL AD++
Sbjct:   92 ERMGISVGTV-AYSPDSVADYALMLMLMAIRGAKSTIHAVAQQNFRLDCVRGKELRDMTVGVIGTGHIGQAVVKRLRGFGCRVLAYD-----NSRKIEADYVQLDELLKNSDIVTLHVPLCADTR 210          

HSP 2 Score: 55.0694 bits (131), Expect = 5.422e-21
Identity = 27/50 (54.00%), Postives = 33/50 (66.00%), Query Frame = 1
Query:  385 KHLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYE 534
            +HLI  + +  M+ GA LINTGRG LVDT +L+ AL  G LG   LDV E
Sbjct:  210 RHLIGQRQIGEMKQGAFLINTGRGALVDTGSLVEALGSGKLGGAALDVLE 259          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: LDHD_LACHE (D-lactate dehydrogenase OS=Lactobacillus helveticus PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.623e-20
Identity = 40/121 (33.06%), Postives = 60/121 (49.59%), Query Frame = 3
Query:    6 RRQRLGLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVEALGARYVSLHELLGESQIISLHCP 368
            + + LG  I  VP YSP+A+AEHA      + R+  R   +    D       G ++            IG  F +IM GFG +++AYD + NP++E  G    SL +L  ++ +ISLH P
Sbjct:   88 KAKELGFQITNVPVYSPNAIAEHAAIQAARVLRQDKRMDEKMAKRDLRWAPTIGREVRDQVVGVVGTGHIGQVFMRIMEGFGAKVIAYDIFKNPELEKKGYYVDSLDDLYKQADVISLHVP 208          

HSP 2 Score: 48.1358 bits (113), Expect = 2.623e-20
Identity = 22/55 (40.00%), Postives = 34/55 (61.82%), Query Frame = 1
Query:  388 HLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKKAPLF 552
            H+IN +S+A M+ G +++N  RG LVDT A+I  L  G +    +D YE +  +F
Sbjct:  215 HMINDKSIAEMKDGVVIVNCSRGRLVDTDAVIRGLDSGKIFGFVMDTYEDEVGVF 269          
BLAST of EY674794 vs. ExPASy Swiss-Prot
Match: LDHD_LACDA (D-lactate dehydrogenase OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=ldhA PE=1 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 5.775e-20
Identity = 40/122 (32.79%), Postives = 60/122 (49.18%), Query Frame = 3
Query:    3 ARRQRLGLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVEALGARYVSLHELLGESQIISLHCP 368
            A+ + LG  I  VP YSP+A+AEHA      + R+      +    D       G ++            IG  F +IM GFG +++AYD + NP++E  G    SL +L  ++ +ISLH P
Sbjct:   87 AKAKELGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVIGTGHIGQVFMQIMEGFGAKVIAYDIFRNPELEKKGYYVDSLDDLYKQADVISLHVP 208          

HSP 2 Score: 48.1358 bits (113), Expect = 5.775e-20
Identity = 22/55 (40.00%), Postives = 34/55 (61.82%), Query Frame = 1
Query:  388 HLINAQSLAHMQPGAMLINTGRGGLVDTPALIHALKDGHLGYLGLDVYEKKAPLF 552
            H+IN +S+A M+   +++N  RG LVDT A+I  L  G +    +DVYE +  +F
Sbjct:  215 HMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIFGYAMDVYEGEVGIF 269          
The following BLAST results are available for this feature:
BLAST of EY674794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 76
Match NameE-valueIdentityDescription
DDH_HAEIN1.539e-4551.612-hydroxyacid dehydrogenase homolog OS=Haemophilus... [more]
LDHD_ECOLI4.812e-4452.42D-lactate dehydrogenase OS=Escherichia coli (strai... [more]
DDH_ZYMMO9.325e-3945.242-hydroxyacid dehydrogenase homolog OS=Zymomonas m... [more]
DDH1_SCHPO2.062e-3846.342-hydroxyacid dehydrogenase homolog 1 OS=Schizosac... [more]
DDH2_SCHPO8.074e-3443.222-hydroxyacid dehydrogenase homolog 2 OS=Schizosac... [more]
LDHD_DICDI1.476e-3240.48Putative D-lactate dehydrogenase OS=Dictyostelium ... [more]
LDHD_TREPA3.902e-2235.25D-lactate dehydrogenase OS=Treponema pallidum GN=l... [more]
VANH_ENTFA5.422e-2134.40D-specific alpha-keto acid dehydrogenase OS=Entero... [more]
LDHD_LACHE2.623e-2033.06D-lactate dehydrogenase OS=Lactobacillus helveticu... [more]
LDHD_LACDA5.775e-2032.79D-lactate dehydrogenase OS=Lactobacillus delbrueck... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-001-E07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674794 ID=EY674794; Name=EY674794; organism=Citrus sinensis; type=EST; length=1050bp
CTGCCCGCCGCCAACGCCTGGGCCTCCCTATCGTGCGGGTGCCGGCCTAT
TCGCCCCATGCGGTGGCCGAACATGCGGTCGCACTGATCCTGGCCCTCAA
TCGCCGCCTGCACCGCGCCTACAACCGTACCCGCGACGGTGACTTCAGCC
TGCATGGCCTGACCGGTTTCGACCTGGTGGGCAAGACCGTCGGCGTGGTC
GGCACCGGGCAGATCGGCGCCACATTCGCCAAGATCATGGCCGGGTTCGG
CTGCCAGTTGCTGGCGTACGATCCTTACCCCAACCCGCAGGTCGAGGCCC
TCGGTGCGCGCTATGTGAGCCTGCATGAGTTGCTGGGCGAGTCGCAGATC
ATCAGCCTGCATTGCCCGCTGACGGCGGACAGCAAAACACCTGATCAACG
CCCAAAGCCTGGCCCATATGCAGCCCGGCGCGATGCTGATCAATACCGGG
CGCGGGGGCCTGGTGGACACCCCGGCGCTGATTCACGCACTCAAGGACGG
CCACCTCGGCTATCTGGGGCTGGATGTGTATGAAAAAAAAGCCCCACTGT
TTTTTCAAAGAACGCTCCGAATTGCCAATGCAAAAAGAAATTATTGGGCC
GCGCCTGGCTGACCTTCCCCCCACTGGATTATCACCGGCCCACCAAGGCT
TTTCTGGACCCGCTAAAGCCCTTGTGGGGGCAATTGCCGGTAAAAAACCC
TTGGCTCAAATTCCAGGTCTGTGGGATTGGGGGGGATAGGCAACAAAACT
CCCTTTAAAAAGAGATATTTAAGTGGATCAAAAATACCCCACGCCCATTG
AAAGAGGGGGGGGGCCCTGAGAAAAAAAAAAAACCACACCACCAAATAAT
AAGAAGAAAAACAGAGGGACAAAAAAAAACAATATTCCCCATTTTATAAA
TTTTGCGAGAAACCCCAAAACAAAAACCCCCTCCATTTATAATAATGGAG
CCCACGCCCCACCATGGGAGCGGCGGAGGGGCCCTATTTTGACACAAAAA
CTGCAACACCAAGGAACAGCACAGTGAGGTGGGGTGGAACCCCTTATCGA
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