EY674787

Overview
NameEY674787
Unique NameEY674787
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1064
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13632 contig Csv1_Contig13632:661..1722. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY674787 vs. ExPASy Swiss-Prot
Match: CAF1K_ARATH (Probable CCR4-associated factor 1 homolog 11 OS=Arabidopsis thaliana GN=CAF1-11 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 2.450e-52
Identity = 97/124 (78.23%), Postives = 108/124 (87.10%), Query Frame = 1
Query:    1 EGVDSPLFAELMMSSGLVPPESVSWVTFHSAYDFGYLVKILTRPSLPSGLDEFLTILRVFFGNNIYDVKHIMRFC-QSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYFVHD 369
            EGV+S  FAELMMSSGL+  ESVSWVTFHSAYDFGYLVKILTR  LP  L EFL +LR FFG+ +YDVKHIMRFC Q LYGGLDRVAR+L+V+RAVGKCHQAGSDSLLTW AFQ++RD+YFV D
Sbjct:  140 EGVESERFAELMMSSGLICNESVSWVTFHSAYDFGYLVKILTRRQLPVALREFLGLLRAFFGDRVYDVKHIMRFCEQRLYGGLDRVARSLEVNRAVGKCHQAGSDSLLTWQAFQRMRDLYFVED 263          

HSP 2 Score: 30.4166 bits (67), Expect = 2.450e-52
Identity = 13/14 (92.86%), Postives = 13/14 (92.86%), Query Frame = 2
Query:  371 GPEKHAGVLYGLEV 412
            G EKHAGVLYGLEV
Sbjct:  264 GAEKHAGVLYGLEV 277          
BLAST of EY674787 vs. ExPASy Swiss-Prot
Match: CAF1I_ARATH (Probable CCR4-associated factor 1 homolog 9 OS=Arabidopsis thaliana GN=CAF1-9 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.042e-51
Identity = 91/124 (73.39%), Postives = 106/124 (85.48%), Query Frame = 1
Query:    1 EGVDSPLFAELMMSSGLVPPESVSWVTFHSAYDFGYLVKILTRPSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQ-SLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYFVHD 369
            +GV+S  FAELMMSSGLV  E VSWVTFHSAYDFGYL+KILTR  LP  L EF  ++RV FG  +YDVKH+M+FC+  L+GGLDRVARTL+V+RAVGKCHQAGSDSLLTWHAFQ++RD+YFV D
Sbjct:  142 DGVESERFAELMMSSGLVCNEEVSWVTFHSAYDFGYLMKILTRRELPGALGEFKRVMRVLFGERVYDVKHMMKFCERRLFGGLDRVARTLEVNRAVGKCHQAGSDSLLTWHAFQRMRDLYFVQD 265          

HSP 2 Score: 33.4982 bits (75), Expect = 2.042e-51
Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = 2
Query:  371 GPEKHAGVLYGLEV 412
            GPEKHAGVLYGLEV
Sbjct:  266 GPEKHAGVLYGLEV 279          
BLAST of EY674787 vs. ExPASy Swiss-Prot
Match: CAF1F_ARATH (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana GN=CAF1-6 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.157e-32
Identity = 67/121 (55.37%), Postives = 93/121 (76.86%), Query Frame = 1
Query:    1 EGVDSPLFAELMMSSGLVPPESVSWVTFHSAYDFGYLVKILTRPSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYFV 363
            +G+DS  FAEL+MSSG+V  E+V WVTFHS YDFGYL+K+LT  +LP    +F  ++ V+F   +YD+KH+M+FC SL+GGL+++A  L+V R VG CHQAGSDSLLT   F+K+++ +FV
Sbjct:  134 DGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQTDFFKLINVYF-PTVYDIKHLMKFCNSLHGGLNKLAELLEVER-VGICHQAGSDSLLTSCTFRKLKENFFV 252          
BLAST of EY674787 vs. ExPASy Swiss-Prot
Match: CAF1G_ARATH (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana GN=CAF1-7 PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 9.798e-32
Identity = 67/120 (55.83%), Postives = 91/120 (75.83%), Query Frame = 1
Query:    4 GVDSPLFAELMMSSGLVPPESVSWVTFHSAYDFGYLVKILTRPSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYFV 363
            G+DS  FAEL+MSSG+V  E+V WVTFHS YDFGYL+K+LT  +LP     F  ++ V+F   +YD+KH+M+FC SL+GGL+++A  LDV R VG CHQAGSDSLLT   F+K+++ +F+
Sbjct:  136 GIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQTGFFEMISVYF-PRVYDIKHLMKFCNSLHGGLNKLAELLDVER-VGICHQAGSDSLLTSCTFRKLQENFFI 253          
BLAST of EY674787 vs. ExPASy Swiss-Prot
Match: CAF1J_ARATH (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana GN=CAF1-10 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.291e-30
Identity = 65/120 (54.17%), Postives = 87/120 (72.50%), Query Frame = 1
Query:    1 EGVDSPLFAELMMSSGLVPPESVSWVTFHSAYDFGYLVKILTRPSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYF 360
            +G+D   F ELMMSSG+V  +++SWVTFH  YDFGYLVK+LT   LP    +F  +L V+F   +YD+KH+M FC  L+GGL+R+A  + V R VG CHQAGSDSLLT  +F+K+++ YF
Sbjct:  134 KGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQADFFKLLYVYF-PTVYDIKHLMTFCNGLFGGLNRLAELMGVER-VGICHQAGSDSLLTLGSFRKLKERYF 251          

HSP 2 Score: 21.9422 bits (45), Expect = 1.291e-30
Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 2
Query:  377 EKHAGVLYGLEV 412
            EK+ GVLYGL V
Sbjct:  256 EKYTGVLYGLGV 267          
BLAST of EY674787 vs. ExPASy Swiss-Prot
Match: CNOT7_XENLA (CCR4-NOT transcription complex subunit 7 OS=Xenopus laevis GN=cnot7 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.324e-28
Identity = 65/120 (54.17%), Postives = 88/120 (73.33%), Query Frame = 1
Query:    1 EGVDSPLFAELMMSSGLVPPESVSWVTFHSAYDFGYLVKILTRPSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYF 360
            EG+++  FAEL M+SG+V  E V W++FHS YDFGYL+KILT  +LP    +F  ILR+FF   IYDVK++M+ C++L GGL  VA  L++ R +G  HQAGSDSLLT  AF K+R+++F
Sbjct:  129 EGIETQYFAELFMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEVEQDFFEILRLFF-PVIYDVKYLMKSCKNLKGGLQEVAEQLELER-IGPQHQAGSDSLLTGMAFFKMREMFF 246          
BLAST of EY674787 vs. ExPASy Swiss-Prot
Match: CNOT7_MOUSE (CCR4-NOT transcription complex subunit 7 OS=Mus musculus GN=Cnot7 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.730e-28
Identity = 65/120 (54.17%), Postives = 89/120 (74.17%), Query Frame = 1
Query:    1 EGVDSPLFAELMMSSGLVPPESVSWVTFHSAYDFGYLVKILTRPSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYF 360
            EG+++  FAEL+M+SG+V  E V W++FHS YDFGYL+KILT  +LP    +F  ILR+FF   IYDVK++M+ C++L GGL  VA  L++ R +G  HQAGSDSLLT  AF K+R+++F
Sbjct:  129 EGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFF-PVIYDVKYLMKSCKNLKGGLQEVAEQLELER-IGPQHQAGSDSLLTGMAFFKMREMFF 246          
BLAST of EY674787 vs. ExPASy Swiss-Prot
Match: CNOT7_HUMAN (CCR4-NOT transcription complex subunit 7 OS=Homo sapiens GN=CNOT7 PE=1 SV=3)

HSP 1 Score: 127.102 bits (318), Expect = 1.730e-28
Identity = 65/120 (54.17%), Postives = 89/120 (74.17%), Query Frame = 1
Query:    1 EGVDSPLFAELMMSSGLVPPESVSWVTFHSAYDFGYLVKILTRPSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYF 360
            EG+++  FAEL+M+SG+V  E V W++FHS YDFGYL+KILT  +LP    +F  ILR+FF   IYDVK++M+ C++L GGL  VA  L++ R +G  HQAGSDSLLT  AF K+R+++F
Sbjct:  129 EGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFF-PVIYDVKYLMKSCKNLKGGLQEVAEQLELER-IGPQHQAGSDSLLTGMAFFKMREMFF 246          
BLAST of EY674787 vs. ExPASy Swiss-Prot
Match: CNOT7_CHICK (CCR4-NOT transcription complex subunit 7 OS=Gallus gallus GN=CNOT7 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.730e-28
Identity = 65/120 (54.17%), Postives = 89/120 (74.17%), Query Frame = 1
Query:    1 EGVDSPLFAELMMSSGLVPPESVSWVTFHSAYDFGYLVKILTRPSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYF 360
            EG+++  FAEL+M+SG+V  E V W++FHS YDFGYL+KILT  +LP    +F  ILR+FF   IYDVK++M+ C++L GGL  VA  L++ R +G  HQAGSDSLLT  AF K+R+++F
Sbjct:  129 EGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFF-PVIYDVKYLMKSCKNLKGGLQEVAEQLELER-IGPQHQAGSDSLLTGMAFFKMREMFF 246          
BLAST of EY674787 vs. ExPASy Swiss-Prot
Match: CNOT7_BOVIN (CCR4-NOT transcription complex subunit 7 OS=Bos taurus GN=CNOT7 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.730e-28
Identity = 65/120 (54.17%), Postives = 89/120 (74.17%), Query Frame = 1
Query:    1 EGVDSPLFAELMMSSGLVPPESVSWVTFHSAYDFGYLVKILTRPSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYGGLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKIRDVYF 360
            EG+++  FAEL+M+SG+V  E V W++FHS YDFGYL+KILT  +LP    +F  ILR+FF   IYDVK++M+ C++L GGL  VA  L++ R +G  HQAGSDSLLT  AF K+R+++F
Sbjct:  129 EGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFF-PVIYDVKYLMKSCKNLKGGLQEVAEQLELER-IGPQHQAGSDSLLTGMAFFKMREMFF 246          
The following BLAST results are available for this feature:
BLAST of EY674787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
CAF1K_ARATH2.450e-5278.23Probable CCR4-associated factor 1 homolog 11 OS=Ar... [more]
CAF1I_ARATH2.042e-5173.39Probable CCR4-associated factor 1 homolog 9 OS=Ara... [more]
CAF1F_ARATH1.157e-3255.37Probable CCR4-associated factor 1 homolog 6 OS=Ara... [more]
CAF1G_ARATH9.798e-3255.83Probable CCR4-associated factor 1 homolog 7 OS=Ara... [more]
CAF1J_ARATH1.291e-3054.17Probable CCR4-associated factor 1 homolog 10 OS=Ar... [more]
CNOT7_XENLA1.324e-2854.17CCR4-NOT transcription complex subunit 7 OS=Xenopu... [more]
CNOT7_MOUSE1.730e-2854.17CCR4-NOT transcription complex subunit 7 OS=Mus mu... [more]
CNOT7_HUMAN1.730e-2854.17CCR4-NOT transcription complex subunit 7 OS=Homo s... [more]
CNOT7_CHICK1.730e-2854.17CCR4-NOT transcription complex subunit 7 OS=Gallus... [more]
CNOT7_BOVIN1.730e-2854.17CCR4-NOT transcription complex subunit 7 OS=Bos ta... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-001-D08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674787 ID=EY674787; Name=EY674787; organism=Citrus sinensis; type=EST; length=1064bp
GAAGGCGTTGACTCCCCTTTGTTCGCCGAGTTGATGATGTCGTCGGGACT
CGTCCCCCCCGAATCGGTGAGTTGGGTCACGTTCCACAGCGCGTACGATT
TCGGGTACCTGGTTAAGATCCTCACGCGCCCCAGCTTGCCCAGTGGCCTA
GACGAGTTCTTGACGATCCTCAGGGTGTTTTTCGGTAACAATATTTATGA
CGTCAAACACATTATGCGGTTCTGTCAGAGCTTGTACGGTGGTTTGGACC
GAGTGGCTCGTACGTTGGATGTGAGCCGGGCGGTCGGGAAGTGCCACCAG
GCCGGTTCGGATAGCCTTCTGACCTGGCATGCCTTTCAAAAAATTAGGGA
TGTGTATTTCGTCCATGACCGGACCGGAGAAACATGCCGGCGTATTGTAT
GGACTAGAAGTGTACTAGATTTAAATTTTGGCCAATTATATTAATTTGAT
TTTTTTAAAGTGCCTTTTGCAAATTAATAAGGAATTAAATTGGGGAATTA
AGGAAAATAAATTTCTTTGCATGTAAATTCAAAGGGTAATCCAAAAATGT
ATAAGGTTGAAGGCTCATTATAAGTATGAAAATTTTTGTATTGGGGGGGG
CCGTTTAAGGAGATTCTATTTTAGTTTCCCGTGGGAGGCAAAGAGCAAAG
CTTCTTTCAATTGGGGGGCCCGAATTATATTTTCGTGGGCCTTCTTTTTT
TTATGTTTGGGGGTTGGGGAAAATCCTTGGGGTTTCTCCATTTTAAGCAC
CTTTGGGGTTCGTACCCCCCTCTTTTCTCACAAGGGGAGAATAAATACAG
CAAAAAGCGCACCCCCCCCGTTTACCCCCTTCCCTCACATCTTTACCTCT
CCCTTTGAGTTTGGGCAACGTGGGGTCACCCCCCCCCTTGAAACTGAGTC
TCTTTTGATATGACTGGGTTGGAGGTGGAGGGGGGTGTATATTTGCATAA
GTGATGAGATCTCATATATGCAATTGTGTTGTGGGAGCAAGACGACCATT
GAGCGTACCTCCCACACGCCCCTCTTCTTATCTTTTTATATTTTTTGTTA
TCAGCGTCTTTTTT
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