EY674769

Overview
NameEY674769
Unique NameEY674769
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length951
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSHC_ARATH (Cell division protease ftsH homolog 12, chloroplastic OS=Arabidopsis thaliana GN=FTSH12 PE=2 SV=2)

HSP 1 Score: 215.312 bits (547), Expect = 4.110e-55
Identity = 130/194 (67.01%), Postives = 143/194 (73.71%), Query Frame = 1
Query:   19 KERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQFALRVWVYLLTEEEQPEM*TKCFLLKKKRLLGLVHGSWGP*N*LHLFSSI*FGMHFLKLPTWGQGKLAKFCGFFPREE 600
            KE+TGIDRFSLRQAVIFICATNRPDELDLEFVR GRIDRRLYIGLPDAKQRVQIF VHSAGK LAED++F +LVFRTVGFSGADIRNLVNE+ IMSVRKG S I QQDIVDVLDKQ    + V LLTEEEQ +   +    +KKRLL  VH + G     HLF    +      LP    GK      F+PRE+
Sbjct:  622 KEKTGIDRFSLRQAVIFICATNRPDELDLEFVRSGRIDRRLYIGLPDAKQRVQIFGVHSAGKNLAEDIDFGKLVFRTVGFSGADIRNLVNEAAIMSVRKGRSYIYQQDIVDVLDKQLLEGMGV-LLTEEEQQKC-EQSVSYEKKRLLA-VHEA-GHIVLAHLFPRFDWHAFSQLLP---GGKETAVSVFYPRED 808          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH1_ORYSJ (Cell division protease ftsH homolog 1, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH1 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.862e-23
Identity = 53/115 (46.09%), Postives = 79/115 (68.70%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQFA 372
            T +D F+    VI + ATNRPD LD   +RPGR DR++ +  PD   RV+I +VHS GK LA+DV+FE++  RT GF+GAD++NL+NE+ I++ R+   +I + +I D L++  A
Sbjct:  360 TEMDGFAGNSGVIVLAATNRPDVLDAALLRPGRFDRQVTVDRPDVAGRVKILEVHSRGKALAKDVDFEKIARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIA 474          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_MEDSA (Cell division protease ftsH homolog, chloroplastic OS=Medicago sativa GN=FTSH PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 7.076e-23
Identity = 52/115 (45.22%), Postives = 77/115 (66.96%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQFA 372
            T +D FS    VI + ATNRPD LD   +RPGR DR++ +  PD   RV+I  VHS GK LA+DV+F+++  RT GF+G D++NL+NE+ I++ R+   +I + +I D L++  A
Sbjct:  381 TEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFDKIARRTPGFTGVDLQNLMNEAAILAARRDLKEISKDEIADALERIIA 495          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_CAPAN (Cell division protease ftsH homolog, chloroplastic (Fragment) OS=Capsicum annuum GN=FTSH PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 9.241e-23
Identity = 52/115 (45.22%), Postives = 78/115 (67.83%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQFA 372
            T +D FS    VI + ATNRPD LD   +RPG+ DR++ +  PD   RV+I  VHS GK LA+DV+F+++  RT GF+GAD++NL+NE+ I++ R+   +I + +I D L++  A
Sbjct:  358 TEMDGFSGNSGVIVLAATNRPDVLDSALLRPGKFDRQVTVDRPDVAGRVRILQVHSRGKALAKDVDFDKIARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIA 472          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH5_ARATH (Cell division protease ftsH homolog 5, chloroplastic OS=Arabidopsis thaliana GN=FTSH5 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.576e-22
Identity = 52/115 (45.22%), Postives = 77/115 (66.96%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQFA 372
            T +D FS    VI + ATNRPD LD   +RPGR DR++ +  PD   RVQI  VHS GK + +DV++E++  RT GF+GAD++NL+NE+ I++ R+   +I + +I D L++  A
Sbjct:  378 TEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQILKVHSRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALERIIA 492          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_TOBAC (Cell division protease ftsH homolog, chloroplastic OS=Nicotiana tabacum GN=FTSH PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 2.059e-22
Identity = 51/115 (44.35%), Postives = 77/115 (66.96%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQFA 372
            T +D FS    VI + ATNRPD LD   +RPGR DR++ +  PD   R++I  VHS GK L +DV+FE++  RT G++GAD++NL+NE+ I++ R+   +I + +I D L++  A
Sbjct:  381 TEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRIKILQVHSRGKALTKDVDFEKIARRTPGYTGADLQNLMNEAAILAARRELKEISKDEISDALERIIA 495          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH1_ARATH (Cell division protease ftsH homolog 1, chloroplastic OS=Arabidopsis thaliana GN=FTSH1 PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 2.059e-22
Identity = 52/115 (45.22%), Postives = 77/115 (66.96%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQFA 372
            T +D FS    VI + ATNRPD LD   +RPGR DR++ +  PD   RV+I  VHS GK L +DV+F+++  RT GF+GAD++NL+NE+ I++ R+   +I + +I D L++  A
Sbjct:  390 TEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALGKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALERIIA 504          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH6_ARATH (Cell division protease ftsH homolog 6, chloroplastic OS=Arabidopsis thaliana GN=FTSH6 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.022e-21
Identity = 52/112 (46.43%), Postives = 74/112 (66.07%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            T +D F+    VI I ATNRP+ LD   +RPGR DR++ +GLPD + R +I  VHS  K+L +DV+   +  RT GFSGAD+ NL+NE+ I++ R+G  KI   +I D +D+
Sbjct:  352 TEMDGFAGNTGVIVIAATNRPEILDSALLRPGRFDRQVSVGLPDIRGREEILKVHSRSKKLDKDVSLSVIAMRTPGFSGADLANLMNEAAILAGRRGKDKITLTEIDDSIDR 463          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_AQUAE (Cell division protease ftsH homolog OS=Aquifex aeolicus GN=ftsH PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.276e-21
Identity = 48/110 (43.64%), Postives = 73/110 (66.36%), Query Frame = 1
Query:   34 IDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 363
            +D F     +I I ATNRPD LD   +RPGR DR+++I  PD + R +I  VH+  K+LA+DV+ E +   T GF+GAD+ NL+NE+ +++ RKG  +I  ++I + LD+
Sbjct:  286 MDGFDTSDGIIVIAATNRPDILDPALLRPGRFDRQIFIPKPDVRGRYEILKVHARNKKLAKDVDLEFVARATPGFTGADLENLLNEAALLAARKGKEEITMEEIEEALDR 395          
BLAST of EY674769 vs. ExPASy Swiss-Prot
Match: FTSH_CYAME (Cell division protease ftsH homolog OS=Cyanidioschyzon merolae GN=ftsH PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.650e-21
Identity = 50/115 (43.48%), Postives = 73/115 (63.48%), Query Frame = 1
Query:   28 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQFA 372
            T +D F     VI I ATNR D LD   +RPGR DR++ + +PD K R+ I  VH+  K+L   V+ E +  RT GF+GAD+ NL+NE+ I++VR+G  +I  ++I D +D+  A
Sbjct:  282 TEMDGFEGNTGVIVIAATNRVDVLDAALLRPGRFDRQIMVSMPDVKSRIAILKVHANQKKLHPQVSLEAVARRTAGFAGADLANLLNEAAILAVRRGLKQITWKEIDDAIDRVIA 396          
The following BLAST results are available for this feature:
BLAST of EY674769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
FTSHC_ARATH4.110e-5567.01Cell division protease ftsH homolog 12, chloroplas... [more]
FTSH1_ORYSJ1.862e-2346.09Cell division protease ftsH homolog 1, chloroplast... [more]
FTSH_MEDSA7.076e-2345.22Cell division protease ftsH homolog, chloroplastic... [more]
FTSH_CAPAN9.241e-2345.22Cell division protease ftsH homolog, chloroplastic... [more]
FTSH5_ARATH1.576e-2245.22Cell division protease ftsH homolog 5, chloroplast... [more]
FTSH_TOBAC2.059e-2244.35Cell division protease ftsH homolog, chloroplastic... [more]
FTSH1_ARATH2.059e-2245.22Cell division protease ftsH homolog 1, chloroplast... [more]
FTSH6_ARATH1.022e-2146.43Cell division protease ftsH homolog 6, chloroplast... [more]
FTSH_AQUAE2.276e-2143.64Cell division protease ftsH homolog OS=Aquifex aeo... [more]
FTSH_CYAME8.650e-2143.48Cell division protease ftsH homolog OS=Cyanidiosch... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-001-C01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674769 ID=EY674769; Name=EY674769; organism=Citrus sinensis; type=EST; length=951bp
CTTACCATCCCATGTACCAAGGAAAGAACTGGTATTGATCGGTTTTCACT
TAGACAAGCTGTCATATTCATCTGCGCTACCAATAGGCCAGATGAATTGG
ACCTTGAGTTTGTCCGCCCTGGACGTATTGACCGCCGTTTATACATTGGT
TTGCCTGATGCAAAGCAACGAGTGCAAATATTTGATGTGCACAGTGCAGG
AAAGCAACTTGCAGAAGATGTAAACTTTGAAGAGCTTGTCTTCCGTACAG
TTGGTTTTTCTGGGGCAGATATTAGAAATCTTGTGAATGAATCAGGAATA
ATGTCGGTGAGAAAAGGACATTCCAAAATCCAGCAACAAGACATCGTTGA
TGTGCTAGATAAACAATTTGCTTTGAGGGTATGGGTGTACCTTCTTACAG
AAGAAGAGCAACCAGAAATGTGAACAAAGTGTTTTCTTTTGAAAAAAAAA
AGGCTCTTGGGCTTGGTACATGGAAGCTGGGGCCCTTAGAATTAGCTCCA
CCTTTTTTCCTCGATTTGATTTGGCATGCATTTTCTCAAGCTCCCAACCT
GGGGGCAAGGGAAACTGGCAAAATTCTGTGGTTTTTTCCCTCGTGAAGAA
CACAAAAAATCAAGGGTTAAACAACCTTTTGGCTACTAGAAAAATGCAAA
TGGGAGGGGGGCCATGGGGGGACAAAGGGGCGGAACGACTTTGTGTGTGG
GCAAATATGTAAACTGAAGGAAAGGAAGGGAGGCCACTTAGAAAAAAAAA
TTAAAATTTGGCTAGGGAAATAGGGGGTATTTTCCCACCAAAAAGGCAGG
TGTGGGGGGGTTAGGCGGTTTTTACAAAAAAAGAATTTGAGATTTTTTGG
AGTATAACACAAAAAAGTACAGAAATGGGGTTGTTATTTGAAAAAATAAT
AAGGGGGGATATCTCTCTTCTTGACACCTACCCCCCAATTTTTTTTACAT
T
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