EY684911

Overview
NameEY684911
Unique NameEY684911
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length556
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY684911 vs. ExPASy Swiss-Prot
Match: AKRP_ARATH (Ankyrin repeat domain-containing protein, chloroplastic OS=Arabidopsis thaliana GN=AKRP PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 5.506e-24
Identity = 51/72 (70.83%), Postives = 62/72 (86.11%), Query Frame = 1 
Query:   13 DINLQDNDGWTPLHLAVQARRTDIVKLLLIKGADKTLKNRDGLTPLDVCLYSGRDTRTFGMIKLLKQLPTSK 228
            DIN QD DGWTPLH+AVQARR+DIVKLLLIKGAD  +KN+DGLTPL +CLY GR+ RT+ ++KLLK+ P S+
Sbjct:  351 DINAQDRDGWTPLHVAVQARRSDIVKLLLIKGADIEVKNKDGLTPLGLCLYLGREIRTYEVMKLLKEFPLSR 422
[Close]
BLAST of EY684911 vs. ExPASy Swiss-Prot
Match: EM506_ARATH (Ankyrin repeat domain-containing protein EMB506, chloroplastic OS=Arabidopsis thaliana GN=EMB506 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 4.991e-17
Identity = 38/70 (54.29%), Postives = 53/70 (75.71%), Query Frame = 1 
Query:   13 DINLQDNDGWTPLHLAVQARRTDIVKLLLIKGADKTLKNRDGLTPLDVCLYSGRDTRTFGMIKLLKQLPT 222
            D+N+ DN+GWTPLH+AVQ+R  DI K+LL  GADKT + +DG   LD+ L  GRD +++ ++KLLK +PT
Sbjct:  243 DVNVADNEGWTPLHIAVQSRNRDITKILLTNGADKTRRTKDGKLALDLALCFGRDFKSYDLVKLLKIMPT 312
The following BLAST results are available for this feature:
BLAST of EY684911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
AKRP_ARATH5.506e-2470.83Ankyrin repeat domain-containing protein, chloropl... [more]
EM506_ARATH4.991e-1754.29Ankyrin repeat domain-containing protein EMB506, c... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-005-B12-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684911 ID=EY684911; Name=EY684911; organism=Citrus sinensis; type=EST; length=556bp
CCACGCGTCCGCGATATAAACCTTCAAGATAATGATGGATGGACACCATT
ACATCTTGCTGTTCAAGCTCGTAGGACTGACATAGTGAAACTGTTACTGA
TTAAAGGAGCTGATAAAACTTTGAAAAACCGGGATGGCTTGACTCCACTT
GATGTCTGCCTCTATTCTGGTCGAGACACAAGGACATTCGGAATGATCAA
GCTGTTGAAGCAGCTTCCTACATCCAAATGACTGCTCAACTTCCAATCCA
TTTGCATCTGTCTTGTGCCCAGTATTGTTAGATACAGCTTGATCCAAAGT
TACATTACATCACATGAAACTCAATTATGCATAGATTCCTCTGTACAAAC
CATTATCCTCTGCTAGAAGCAGAAGCGAATGCACTACAAGGTAAACAAGG
AGCATGATGTTTCCATACTCTGCTTATTTGTTTGTAAAATCAGTCTCGGA
CACGTCTGTCAACTCCTACTGTGGTATTTAGATATCACAGATATCTCGCT
GTTAAAATTCTCCGAAATTTAAAATAGAACTAAAAATCAACAAAAAAAAA
AAAAAA
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