EY673884

Overview
NameEY673884
Unique NameEY673884
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length967
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY673884 vs. ExPASy Swiss-Prot
Match: AMO_PEA (Primary amine oxidase OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.445e-37
Identity = 71/148 (47.97%), Postives = 104/148 (70.27%), Query Frame = 1
Query:   64 VVSILPISISKKRPLDSLSPAEFTLVQTIVKTSYP--SNNLSFHYVGLDEPDKAVVYSWLSN-SKIKIPRRAIVIG*QNNQTHEIIVDLSRRSIVSDKVYTGHGFPLLTLEEQRTGAAPVLAYEPFKASVKKRGLNISDVVCSSSTVG 498
            VVS+ P+ +  + PLD L+  EF  VQTIV+  YP  +N L+FHY+GLD+P+K  V  + ++ + + IPR+  V+   N+QTHEI+++L  RSIVSD ++ G+GFP+L+++EQ       L Y PF  SVKKRGLN+S++VCSS T+G
Sbjct:   23 VVSVTPLHV--QHPLDPLTKEEFLAVQTIVQNKYPISNNRLAFHYIGLDDPEKDHVLRYETHPTLVSIPRKIFVVAIINSQTHEILINLRIRSIVSDNIHNGYGFPILSVDEQSLAIKLPLKYPPFIDSVKKRGLNLSEIVCSSFTMG 168          

HSP 2 Score: 34.6538 bits (78), Expect = 1.445e-37
Identity = 18/51 (35.29%), Postives = 28/51 (54.90%), Query Frame = 2
Query:  569 VF*SPSKGITIVVDIEEMKVTQYNDGE-------GSTEYQIPNPLNKEGPK 700
            ++  P  GITIV D++ MK+ +Y+D +        +TEYQ+       GPK
Sbjct:  192 IYVRPITGITIVADLDLMKIVEYHDRDIEAVPTAENTEYQVSKQSPPFGPK 242          

HSP 3 Score: 26.1794 bits (56), Expect = 1.445e-37
Identity = 11/30 (36.67%), Postives = 19/30 (63.33%), Query Frame = 3
Query:  483 FFDGWCGEKESKRELKFPCFYTDQGTVNMF 572
            F  GW GE+++ R ++  CF   + TVN++
Sbjct:  165 FTMGWFGEEKNVRTVRLDCF-MKESTVNIY 193          
BLAST of EY673884 vs. ExPASy Swiss-Prot
Match: AMO_LENCU (Primary amine oxidase (Fragment) OS=Lens culinaris PE=1 SV=3)

HSP 1 Score: 133.65 bits (335), Expect = 1.987e-36
Identity = 68/137 (49.64%), Postives = 96/137 (70.07%), Query Frame = 1
Query:   97 KRPLDSLSPAEFTLVQTIVKTSYP--SNNLSFHYVGLDEPDKAVVYSW-LSNSKIKIPRRAIVIG*QNNQTHEIIVDLSRRSIVSDKVYTGHGFPLLTLEEQRTGAAPVLAYEPFKASVKKRGLNISDVVCSSSTVG 498
            + PLD ++  EF  VQTIV+  YP  +N L+FHY+G+D+P+K +V  +  S + I IPR+  V+   N+QTHEI++DL+ +SIVSD ++ G+GFP+L+  EQ       L Y PF ASV KRGLNIS++VCSS T+G
Sbjct:   25 QHPLDPITKEEFLAVQTIVQNKYPISNNKLAFHYIGVDDPEKDLVLKYETSPTLISIPRKIFVVAIINSQTHEILIDLTIKSIVSDNIHNGYGFPVLSAAEQFLAIDLPLKYPPFIASVNKRGLNISEIVCSSFTMG 161          

HSP 2 Score: 34.6538 bits (78), Expect = 1.987e-36
Identity = 18/51 (35.29%), Postives = 28/51 (54.90%), Query Frame = 2
Query:  569 VF*SPSKGITIVVDIEEMKVTQYNDGE-------GSTEYQIPNPLNKEGPK 700
            ++  P  GITIV D++ MK+ +Y+D +        +TEYQ+       GPK
Sbjct:  185 IYVRPITGITIVADLDLMKIVEYHDRDTEAVPTAENTEYQVSKQSPPFGPK 235          

HSP 3 Score: 26.5646 bits (57), Expect = 1.987e-36
Identity = 11/30 (36.67%), Postives = 19/30 (63.33%), Query Frame = 3
Query:  483 FFDGWCGEKESKRELKFPCFYTDQGTVNMF 572
            F  GW GE+++ R ++  CF   + TVN++
Sbjct:  158 FTMGWFGEEKNSRTVRVDCF-MKESTVNIY 186          
BLAST of EY673884 vs. ExPASy Swiss-Prot
Match: AMO_ARATH (Primary amine oxidase OS=Arabidopsis thaliana GN=At1g62810 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 5.586e-17
Identity = 48/135 (35.56%), Postives = 71/135 (52.59%), Query Frame = 1
Query:  103 PLDSLSPAEFTLVQTIVKTSYP---SNNLSFHYVGLDEPDKAVVYSWLSNSKIKIPRRAIVIG*QNNQTHEIIVDLSRRSIVSDKVYTGHGFPLLTLEEQRTGAAPVLAYEPFKASVKKRGLNISDVVCSSSTVG 498
            PLD L+  E   V+TI+    P   S + + H + LDEP+K+ V  W   +K+ + RRA V+     QTHEI VDL    +VSD +    G+P+LTL +    +   L    F  S++ RG+  SD+ C +   G
Sbjct:   61 PLDPLTVREINRVRTILSNHDPGFGSGSATIHSMALDEPEKSRVVQWKKGNKL-LSRRAAVVAYWGGQTHEITVDLDSGRVVSDVINRTSGYPILTLNDVFAASQVPLKSLEFNRSIEARGVKFSDLACITPFAG 194          

HSP 2 Score: 26.5646 bits (57), Expect = 5.586e-17
Identity = 14/30 (46.67%), Postives = 18/30 (60.00%), Query Frame = 3
Query:  486 FDGWCGEK-ESKRELKFPCFYTDQGTVNMF 572
            F GW G + E +R ++  CF T QGT N F
Sbjct:  192 FAGWFGSEEEGRRVIRVQCF-TLQGTTNYF 220          
The following BLAST results are available for this feature:
BLAST of EY673884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
AMO_PEA1.445e-3747.97Primary amine oxidase OS=Pisum sativum PE=1 SV=1[more]
AMO_LENCU1.987e-3649.64Primary amine oxidase (Fragment) OS=Lens culinaris... [more]
AMO_ARATH5.586e-1735.56Primary amine oxidase OS=Arabidopsis thaliana GN=A... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-004-C11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY673884 ID=EY673884; Name=EY673884; organism=Citrus sinensis; type=EST; length=967bp
CCACGCGTCCGGAAAGACACAATGGATTCAAAATTAAGATTATTGCTTTT
CTTCTTCTGCTTCGTCGTTTCTATCTTACCAATCTCAATTTCTAAGAAGC
GCCCACTAGACTCTCTATCCCCTGCTGAGTTCACCCTCGTTCAAACCATT
GTCAAAACCTCATACCCTAGCAACAACCTAAGCTTCCACTACGTAGGCTT
GGACGAGCCAGACAAAGCTGTTGTGTACTCATGGCTATCAAATTCCAAAA
TCAAAATCCCTCGCAGAGCCATTGTCATTGGTTGACAAAACAACCAAACT
CATGAAATCATCGTAGACTTGTCGAGACGTTCGATAGTTTCTGATAAAGT
TTACACAGGACACGGATTCCCTTTACTCACCTTAGAAGAGCAACGCACTG
GAGCTGCCCCGGTGCTGGCATATGAGCCGTTTAAAGCATCAGTGAAGAAG
AGGGGACTCAATATATCTGATGTGGTATGTTCTTCTTCGACGGTTGGTGT
GGCGAAAAGGAGAGTAAGAGAGAGCTCAAGTTCCCGTGTTTTTACACGGA
TCAAGGAACTGTCAATATGTTTTTTGAAGCCCATCGAAGGGAATAACGAT
TGTTGTTGATATAGAGGAGATGAAGGTAACTCAGTACAATGACGGGGAAG
GTAGCACCGAATACCAAATCCCGAACCCACTGAATAAAGAAGGGCCAAAG
CTAAACCCGCCGTTTTGGGTCCCACGGTTTAATAGCGTAACCCCCCTGGC
AACGGGAACTTGGGTTCAAAATTGAGGGGAAACACGGTGCAAGAAAGTCT
TGGTTTAATAAAACCCCCTTTTGTTTTAATTTTTTAAATTAACAAAAAAC
ACCCCATAAAAATGGGTTTTCTTTTTCCCCCCCAAAATTTAACAAAAATT
AAAAATTTTTTTTCGAAAAAGGGCCCCACAAAAACACAACACGAGGGGGG
GGAAATAATAACCCTAT
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