EY673880

Overview
NameEY673880
Unique NameEY673880
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length795
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY673880 vs. ExPASy Swiss-Prot
Match: MDHG_CITLA (Malate dehydrogenase, glyoxysomal OS=Citrullus lanatus PE=1 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 2.198e-77
Identity = 150/182 (82.42%), Postives = 158/182 (86.81%), Query Frame = 2
Query:    2 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLDRAGIEEIYSLGPLNGYEKGWLGKGKKRINRETISKGIRFCR 547
            FKK GTYDPKRLLGVTMLDVVRANTFVAEVLGLDPR+VDVPVVGGHAGVTILPLLSQVKP  S T  EI YLTDRIQNGGTEVVEAK GAGSATLSMAYAA KFADACLRGLRGDAGVIECA+V+S VTELPFFASKVRL R GIEE+YSLGPLN YE+  L K KK +   +I KG+ F R
Sbjct:  175 FKKAGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPSSFTQEEISYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVIECAFVSSQVTELPFFASKVRLGRNGIEEVYSLGPLNEYERIGLEKAKKEL-AGSIEKGVSFIR 355          
BLAST of EY673880 vs. ExPASy Swiss-Prot
Match: MDHG_CUCSA (Malate dehydrogenase, glyoxysomal OS=Cucumis sativus GN=MDHG PE=2 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 4.145e-76
Identity = 146/182 (80.22%), Postives = 159/182 (87.36%), Query Frame = 2
Query:    2 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLDRAGIEEIYSLGPLNGYEKGWLGKGKKRINRETISKGIRFCR 547
            FKK GTYDPKRLLGVTMLDVVRANTFVAEVLGLDPR+V+VPVVGGHAGVTILPLLSQVKP  S T  EI+YLTDRIQNGGTEVVEAK GAGSATLSMAYAA KFADACLRGLRGDAGV+ECA+V+S VTELPFFA+KVRL R GI+E+YSLGPLN YE+  L K KK +   +I KG+ F R
Sbjct:  175 FKKAGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPRDVNVPVVGGHAGVTILPLLSQVKPPSSFTQEEINYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVSSQVTELPFFATKVRLGRNGIDEVYSLGPLNEYERIGLEKAKKEL-AGSIEKGVSFIR 355          
BLAST of EY673880 vs. ExPASy Swiss-Prot
Match: MDHG_SOYBN (Malate dehydrogenase, glyoxysomal OS=Glycine max PE=2 SV=2)

HSP 1 Score: 284.263 bits (726), Expect = 5.413e-76
Identity = 144/183 (78.69%), Postives = 156/183 (85.25%), Query Frame = 2
Query:    2 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLDRAGIEEIYSLGPLNGYEKGWLGKGKKRINRETISKGIRFCRE 550
            FK+ GTYDPKRLLGVTMLDVVRANTFVAEVLG+DPR+VDVPVVGGHAG+TILPLLSQ+KP CS TP EI+YLT RIQNGG EVVEAK GAGSATLSMAYAA KFADACL  LRGDAG+IECAYVAS VTELPFFASKVRL R G+EEI  LGPLN YE+  L K KK +   +I KGI F R+
Sbjct:  172 FKRAGTYDPKRLLGVTMLDVVRANTFVAEVLGVDPRDVDVPVVGGHAGITILPLLSQIKPPCSFTPKEIEYLTGRIQNGGPEVVEAKAGAGSATLSMAYAAVKFADACLHALRGDAGIIECAYVASQVTELPFFASKVRLGRVGVEEILPLGPLNDYERESLEKAKKEL-AASIEKGISFIRK 353          
BLAST of EY673880 vs. ExPASy Swiss-Prot
Match: MDHG2_ARATH (Probable malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At2g22780 PE=1 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.575e-75
Identity = 141/183 (77.05%), Postives = 159/183 (86.89%), Query Frame = 2
Query:    2 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLDRAGIEEIYSLGPLNGYEKGWLGKGKKRINRETISKGIRFCRE 550
            FKK GT+DPK+L+GVTMLDVVRANTFVAEV+ LDPREV+VPVVGGHAGVTILPLLSQVKP CS T  EI+YLTDRIQNGGTEVVEAK GAGSATLSMAYAA +FADACLRGLRGDA ++ECAYVAS VTELPFFASKVRL R GI+E+Y LGPLN YE+  L K KK ++  +I KG+ F ++
Sbjct:  173 FKKAGTFDPKKLMGVTMLDVVRANTFVAEVMSLDPREVEVPVVGGHAGVTILPLLSQVKPPCSFTQKEIEYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDANIVECAYVASHVTELPFFASKVRLGRCGIDEVYGLGPLNEYERMGLEKAKKELS-VSIHKGVTFAKK 354          
BLAST of EY673880 vs. ExPASy Swiss-Prot
Match: MDHG_ORYSJ (Malate dehydrogenase, glyoxysomal OS=Oryza sativa subsp. japonica GN=Os12g0632700 PE=1 SV=3)

HSP 1 Score: 282.337 bits (721), Expect = 2.057e-75
Identity = 143/180 (79.44%), Postives = 156/180 (86.67%), Query Frame = 2
Query:    2 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLDRAGIEEIYSLGPLNGYEKGWLGKGKKRINRETISKGIRF 541
            FKK GTYDPKRLLGVT LDVVRANTFVAEVLGLDPR+V+VPV+GGHAGVTILPLLSQV P CS T  EI YLT RIQNGGTEVVEAK GAGSATLSMAYAA+KFADACLRGLRGDAG++EC++VAS VTELPFFASKVRL R GIEEI SLGPLN +E+  L K KK +  E+I KG+ F
Sbjct:  175 FKKAGTYDPKRLLGVTTLDVVRANTFVAEVLGLDPRDVNVPVIGGHAGVTILPLLSQVNPPCSFTSEEISYLTTRIQNGGTEVVEAKAGAGSATLSMAYAASKFADACLRGLRGDAGIVECSFVASQVTELPFFASKVRLGRCGIEEILSLGPLNEFERAGLEKAKKEL-AESIQKGVAF 353          
BLAST of EY673880 vs. ExPASy Swiss-Prot
Match: MDHG2_BRANA (Malate dehydrogenase 2, glyoxysomal OS=Brassica napus GN=MDH2 PE=3 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 6.617e-74
Identity = 142/183 (77.60%), Postives = 157/183 (85.79%), Query Frame = 2
Query:    2 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLDRAGIEEIYSLGPLNGYEKGWLGKGKKRINRETISKGIRFCRE 550
            FKK GTYDPK+LLGVT LDV RANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKP  S TP+EI+YLT+RIQNGGTEVVEAK GAGSATLSMAYAAAKFADACLRGLRGDA VIEC++VAS VTEL FFA+KVRL R G EE++ LGPLN YE+  L K K+ +   +I KG+ F R+
Sbjct:  177 FKKAGTYDPKKLLGVTTLDVARANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPPSSFTPSEIEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDANVIECSFVASQVTELAFFATKVRLGRTGAEEVFQLGPLNEYERVGLEKAKEEL-AGSIQKGVDFIRK 358          
BLAST of EY673880 vs. ExPASy Swiss-Prot
Match: MDHG1_BRANA (Malate dehydrogenase 1, glyoxysomal OS=Brassica napus GN=MDH1 PE=2 SV=2)

HSP 1 Score: 277.33 bits (708), Expect = 6.617e-74
Identity = 142/183 (77.60%), Postives = 157/183 (85.79%), Query Frame = 2
Query:    2 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLDRAGIEEIYSLGPLNGYEKGWLGKGKKRINRETISKGIRFCRE 550
            FKK GTYDPK+LLGVT LDV RANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKP  S TP+EI+YLT+RIQNGGTEVVEAK GAGSATLSMAYAAAKFADACLRGLRGDA VIEC++VAS VTEL FFA+KVRL R G EE++ LGPLN YE+  L K K+ +   +I KG+ F R+
Sbjct:  177 FKKAGTYDPKKLLGVTTLDVARANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPPSSFTPSEIEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDANVIECSFVASQVTELAFFATKVRLGRTGAEEVFQLGPLNEYERVGLEKAKEEL-AGSIQKGVDFIRK 358          
BLAST of EY673880 vs. ExPASy Swiss-Prot
Match: MDHG1_ARATH (Malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At5g09660 PE=1 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 6.617e-74
Identity = 142/183 (77.60%), Postives = 155/183 (84.70%), Query Frame = 2
Query:    2 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLDRAGIEEIYSLGPLNGYEKGWLGKGKKRINRETISKGIRFCRE 550
            FKK GTYDPK+LLGVT LDV RANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKP  S TP EI+YLT+RIQNGGTEVVEAK GAGSATLSMAYAAAKFADACLRGLRGDA V+EC++VAS VTEL FFA+KVRL R G EE+Y LGPLN YE+  L K K  +   +I KG+ F R+
Sbjct:  173 FKKAGTYDPKKLLGVTTLDVARANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPPSSFTPQEIEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDANVVECSFVASQVTELAFFATKVRLGRTGAEEVYQLGPLNEYERIGLEKAKDEL-AGSIQKGVEFIRK 354          
BLAST of EY673880 vs. ExPASy Swiss-Prot
Match: MDHM2_ARATH (Malate dehydrogenase 2, mitochondrial OS=Arabidopsis thaliana GN=At3g15020 PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 7.606e-54
Identity = 110/183 (60.11%), Postives = 133/183 (72.68%), Query Frame = 2
Query:    2 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLDRAGIEEIYSLGPLNGYEKGWLGKGKKRINRETISKGIRFCRE 550
            FKK GTYD K+L GVT LDVVRA TF A    ++  EV+VPVVGGHAG+TILPL SQ  P  +L+   I  LT R Q+GGTEVVEAK G GSATLSMAYA A FADACL+GL G   V+EC++V ST+TELPFFASKVRL + G+EE+  LGPL+ +EK  L   K  + + +I KGI+F  +
Sbjct:  160 FKKAGTYDEKKLFGVTTLDVVRARTFYAGKSDVNVAEVNVPVVGGHAGITILPLFSQASPQANLSDDLIRALTKRTQDGGTEVVEAKAGKGSATLSMAYAGALFADACLKGLNGVPNVVECSFVQSTITELPFFASKVRLGKNGVEEVLDLGPLSDFEKEGLEALKAEL-KSSIEKGIKFANQ 341          
BLAST of EY673880 vs. ExPASy Swiss-Prot
Match: MDHM1_ARATH (Malate dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana GN=At1g53240 PE=1 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.890e-53
Identity = 109/183 (59.56%), Postives = 131/183 (71.58%), Query Frame = 2
Query:    2 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLDRAGIEEIYSLGPLNGYEKGWLGKGKKRINRETISKGIRFCRE 550
            FKK G YD K+L GVT LDVVRA TF A    +   EV+VPV+GGHAGVTILPL SQ  P  +L+   +  LT R Q+GGTEVVEAK G GSATLSMAYA A FADACL+GL G   VIEC+YV ST+TELPFFASKVRL + G+EE+  LGPL+ +EK  L   K  + + +I KG++F  +
Sbjct:  160 FKKAGMYDEKKLFGVTTLDVVRARTFYAGKANVPVAEVNVPVIGGHAGVTILPLFSQATPQANLSSDILTALTKRTQDGGTEVVEAKAGKGSATLSMAYAGALFADACLKGLNGVPDVIECSYVQSTITELPFFASKVRLGKNGVEEVLDLGPLSDFEKEGLEALKPEL-KSSIEKGVKFANQ 341          
The following BLAST results are available for this feature:
BLAST of EY673880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
MDHG_CITLA2.198e-7782.42Malate dehydrogenase, glyoxysomal OS=Citrullus lan... [more]
MDHG_CUCSA4.145e-7680.22Malate dehydrogenase, glyoxysomal OS=Cucumis sativ... [more]
MDHG_SOYBN5.413e-7678.69Malate dehydrogenase, glyoxysomal OS=Glycine max P... [more]
MDHG2_ARATH1.575e-7577.05Probable malate dehydrogenase, glyoxysomal OS=Arab... [more]
MDHG_ORYSJ2.057e-7579.44Malate dehydrogenase, glyoxysomal OS=Oryza sativa ... [more]
MDHG2_BRANA6.617e-7477.60Malate dehydrogenase 2, glyoxysomal OS=Brassica na... [more]
MDHG1_BRANA6.617e-7477.60Malate dehydrogenase 1, glyoxysomal OS=Brassica na... [more]
MDHG1_ARATH6.617e-7477.60Malate dehydrogenase, glyoxysomal OS=Arabidopsis t... [more]
MDHM2_ARATH7.606e-5460.11Malate dehydrogenase 2, mitochondrial OS=Arabidops... [more]
MDHM1_ARATH2.890e-5359.56Malate dehydrogenase 1, mitochondrial OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-004-C05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY673880 ID=EY673880; Name=EY673880; organism=Citrus sinensis; type=EST; length=795bp
TTTCAAGAAAGTTGGCACTTATGATCCAAAGCGACTTTTGGGAGTCACAA
TGCTTGATGTTGTTCGAGCCAATACTTTTGTGGCTGAGGTCTTGGGTCTT
GACCCCAGGGAAGTTGATGTTCCAGTTGTGGGAGGTCATGCAGGGGTTAC
TATTTTACCTCTTTTATCTCAGGTTAAACCATCATGCTCTCTCACCCCTA
CAGAAATTGACTACTTGACAGATCGTATCCAGAATGGTGGTACAGAAGTA
GTTGAGGCAAAAACTGGAGCTGGTTCGGCCACTCTATCGATGGCATATGC
TGCTGCCAAGTTTGCCGATGCTTGTCTCCGAGGCTTGAGGGGGGATGCCG
GTGTTATTGAGTGTGCATACGTGGCTTCTACGGTGACTGAACTCCCTTTC
TTTGCATCCAAAGTACGGCTTGACCGTGCTGGAATTGAGGAAATTTACTC
ACTTGGCCCCTTGAATGGATATGAAAAGGGCTGGTTGGGAAAAGGCAAAA
AAAGAATTAACCGGGAAACCATTTCAAAAGGAATTCGTTTTTGCCGGGAA
ATGATAAACAAACCCCCTGGGGGGAAAAAAGGGAAAATGGGTGGGGGTTT
TTGGTTTTTGCCCCCAATTTTCCACCAAAATATAGTTCCCCCAAAAAAAA
AAAGGGGGGGGTTTCTCTTTTTTCCCCCAGACCAAGATTAAATTATCTTT
TATTAACAAAAAAAAAAACCAAAAAGATTTCCCCTATTAGAGGGGGGGGG
GGGAGAGTGTGGAATATTTCTTAAGATTATCTTTGTGGTAAGGAA
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