EY684668
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684668 vs. ExPASy Swiss-Prot
Match: TBC13_MOUSE (TBC1 domain family member 13 OS=Mus musculus GN=Tbc1d13 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.869e-33 Identity = 81/210 (38.57%), Postives = 116/210 (55.24%), Query Frame = 3 Query: 57 EAMRNILLLFAKLNPVIRYVQGMNEVLAPMYYVFSTDPDEQNAVRITLCSWFSFCLFCAPYSIL*YPLGVQVQQSNIMLNLKNNI*VQENAEADSFSCFVRLLSDSVDHFCQQLDNSSGGILSTLSHLAELLKANDEELWRHLEYTNEIKPQFYAFRWITLLLTQEFNLQPILRIWDTLLSNPFGIQHMLLRVCCAMLLCMKNRLLSGDF 686 E + IL ++AKLNP I YVQGMNE++ P+YY F+TDP+ + W +E+AEAD+F CF L+++ D+F + LD+S GI + + LK D EL+ L+ IKPQF+AFRW+TLLL+QEF L ++RIWD+L ++ +LL VCCAML+ ++ +LL GDF Sbjct: 209 EVVERILFIYAKLNPGIAYVQGMNEIVGPLYYTFATDPNSE---------W------------------------------------KEHAEADTFFCFTNLMAEIRDNFIKSLDDSQCGITYKMEKVYSTLKDKDVELYLKLQ-EQSIKPQFFAFRWLTLLLSQEFLLPDVIRIWDSLFADGNRFDFLLL-VCCAMLILIREQLLEGDF 371
BLAST of EY684668 vs. ExPASy Swiss-Prot
Match: YLOH_SCHPO (TBC domain-containing protein C1952.17c OS=Schizosaccharomyces pombe GN=SPAC1952.17c PE=2 SV=4) HSP 1 Score: 111.694 bits (278), Expect = 4.615e-24 Identity = 72/225 (32.00%), Postives = 108/225 (48.00%), Query Frame = 3 Query: 54 QEAMRNILLLFAKLNPVIRYVQGMNEVLAPMYYVFSTDPDEQNAVRITLCSWFSFCLFCAPYSIL*YPLGVQVQQSNIMLNLKNNI*VQENAEADSFSCFVRLLSDSVDHFCQQLDNSSG-GILSTLSHLAELLKANDEELWRHLEYTNEIKPQFYAFRWITLLLTQEFNLQPILRIWDTLLSNPF-------------GIQHMLLRVCCAMLLCMKNRLLSGDF 686 +EA IL ++AKLNP I YVQGMNE+LAP+YYV +TDP +N LC E D+F F +++ D + + LD+ S GI +S E LK D ELW +LE +I P +Y+FRW T LL+QEF L ++R+WD+++++ G L+ CC++L+ ++ +L +F Sbjct: 249 REAAERILFIYAKLNPGIGYVQGMNEILAPLYYVLATDPTYENYY---LC------------------------------------------ECDAFFLFTQMMVQVRDLYEKTLDHDSDHGIHFLMSKFTERLKKYDYELWENLE-EKQIHPTYYSFRWFTCLLSQEFPLPDVIRLWDSIIADQMKARLFGKNDDGFNGAYDFLMDFCCSILIELRESILERNF 427
BLAST of EY684668 vs. ExPASy Swiss-Prot
Match: TB22A_MOUSE (TBC1 domain family member 22A OS=Mus musculus GN=Tbc1d22a PE=2 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 1.139e-14 Identity = 58/207 (28.02%), Postives = 95/207 (45.89%), Query Frame = 3 Query: 57 EAMRNILLLFAKLNPVIRYVQGMNEVLAPMYYVFSTD-PDEQNAVRITLCSWFSFCLFCAPYSIL*YPLGVQVQQSNIMLNLKNNI*VQENAEADSFSCFVRLLSDSVDHFCQQLDNSSGGILSTLSHLAELLKANDEELWRHLEYTNEIKPQFYAFRWITLLLTQEFNLQPILRIWDTLLSNPFGIQHMLLRVCCAMLLCMKNRLL 674 E IL ++A +P YVQG+N+++ P + VF + D ++ ++ + S P +L N EAD++ C +LL D++ + GI + L EL+ DE + RHL+ +E++ +AFRW+ LL +E L+ +R+WDT S P G H L VC A L+ + +L Sbjct: 299 EIFERILFIWAIRHPASGYVQGINDLVTPFFVVFICEYTDREDVDKVDVSS--------VPAEVL------------------------RNIEADTYWCMSKLLDGIQDNYTF----AQPGIQMKVKMLEELVSRIDERVHRHLD-GHEVRYLQFAFRWMNNLLMRELPLRCTIRLWDTYQSEPEGFSHFHLYVCAAFLVRWRREIL 468
BLAST of EY684668 vs. ExPASy Swiss-Prot
Match: TB22A_MACFA (TBC1 domain family member 22A (Fragment) OS=Macaca fascicularis GN=TBC1D22A PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.139e-14 Identity = 60/206 (29.13%), Postives = 93/206 (45.15%), Query Frame = 3 Query: 57 EAMRNILLLFAKLNPVIRYVQGMNEVLAPMYYVFSTDPDEQNAVRITLCSWFSFCLFCAPYSIL*YPLGVQVQQSNIMLNLKNNI*VQENAEADSFSCFVRLLSDSVDHFCQQLDNSSGGILSTLSHLAELLKANDEELWRHLEYTNEIKPQFYAFRWITLLLTQEFNLQPILRIWDTLLSNPFGIQHMLLRVCCAMLLCMKNRLL 674 E IL ++A +P YVQG+N+++ P + VF + E V S GV + V N EAD++ C +LL D++ + GI + L EL+ DE++ RHL+ +E++ +AFRW+ LL +E L+ +R+WDT S P G H L VC A L+ + +L Sbjct: 280 EIFERILFIWAIRHPASGYVQGINDLVTPFFVVFICEYIEAEEVDTVDVS------------------GVPAE-------------VLRNIEADTYWCMSKLLDGIQDNYTF----AQPGIQMKVKMLEELVSRIDEQVHRHLDQ-HEVRYLQFAFRWMNNLLMREVPLRCTIRLWDTYQSEPEGFSHFHLYVCAAFLVRWRKEIL 449
BLAST of EY684668 vs. ExPASy Swiss-Prot
Match: TB22A_HUMAN (TBC1 domain family member 22A OS=Homo sapiens GN=TBC1D22A PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.943e-14 Identity = 58/206 (28.16%), Postives = 91/206 (44.17%), Query Frame = 3 Query: 57 EAMRNILLLFAKLNPVIRYVQGMNEVLAPMYYVFSTDPDEQNAVRITLCSWFSFCLFCAPYSIL*YPLGVQVQQSNIMLNLKNNI*VQENAEADSFSCFVRLLSDSVDHFCQQLDNSSGGILSTLSHLAELLKANDEELWRHLEYTNEIKPQFYAFRWITLLLTQEFNLQPILRIWDTLLSNPFGIQHMLLRVCCAMLLCMKNRLL 674 E IL ++A +P YVQG+N+++ P + VF + E V S + C N EAD++ C +LL D++ + GI + L EL+ DE++ RHL+ +E++ +AFRW+ LL +E L+ +R+WDT S P G H L VC A L+ + +L Sbjct: 300 EIFERILFIWAIRHPASGYVQGINDLVTPFFVVFICEYIEAEEVDTVDVSGVPAEVLC-------------------------------NIEADTYWCMSKLLDGIQDNYTF----AQPGIQMKVKMLEELVSRIDEQVHRHLDQ-HEVRYLQFAFRWMNNLLMREVPLRCTIRLWDTYQSEPDGFSHFHLYVCAAFLVRWRKEIL 469
BLAST of EY684668 vs. ExPASy Swiss-Prot
Match: TBC13_HUMAN (TBC1 domain family member 13 OS=Homo sapiens GN=TBC1D13 PE=1 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 2.149e-13 Identity = 35/62 (56.45%), Postives = 48/62 (77.42%), Query Frame = 3 Query: 501 IKPQFYAFRWITLLLTQEFNLQPILRIWDTLLSNPFGIQHMLLRVCCAMLLCMKNRLLSGDF 686 IKPQF+AFRW+TLLL+QEF L ++RIWD+L ++ +LL VCCAML+ ++ +LL GDF Sbjct: 186 IKPQFFAFRWLTLLLSQEFLLPDVIRIWDSLFADDNRFDFLLL-VCCAMLMLIREQLLEGDF 246 The following BLAST results are available for this feature:
BLAST of EY684668 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY684668 ID=EY684668; Name=EY684668; organism=Citrus sinensis; type=EST; length=777bpback to top |