EY703443

Overview
NameEY703443
Unique NameEY703443
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length961
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY703443 vs. ExPASy Swiss-Prot
Match: PIP_ARATH (Proline iminopeptidase OS=Arabidopsis thaliana GN=PIP PE=2 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 1.189e-17
Identity = 51/128 (39.84%), Postives = 60/128 (46.88%), Query Frame = 2
Query:  344 FLGIIIFDQAGARNTAPHASLDQDTTWHLIGYITYLRPRLTIP*WRGLDGSWGITRPHAYNHIQLNKVTDXXXXXXXXXXXXEIDWFYGGWCCCYLPCCMGAISRPHFYNET-SCHVDAYSMTLNSLD 724
            F  I++FDQ GA  + PHA L+++TTW L+  I  LR  L IP W    GSWG T   AY+    +KVT             EIDWFY G      P            NE  S  VDAY   LNS D
Sbjct:  122 FYRIVLFDQRGAGKSTPHACLEENTTWDLVNDIEKLREHLKIPEWLVFGGSWGSTLALAYSQSHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWEEFRDLIPENERGSSLVDAYHKRLNSDD 249          

HSP 2 Score: 27.7202 bits (60), Expect = 1.189e-17
Identity = 15/37 (40.54%), Postives = 19/37 (51.35%), Query Frame = 3
Query:  738 YATE*AWTTWDIMTVALIQKTKTYDMA-DDVLSLSLA 845
            YA   AWT W++MT  L    +    A DD  SL+ A
Sbjct:  254 YAAARAWTKWEMMTAYLRPNLENVQKAEDDKFSLAFA 290          

HSP 3 Score: 21.1718 bits (43), Expect = 1.189e-17
Identity = 9/20 (45.00%), Postives = 11/20 (55.00%), Query Frame = 3
Query:  285 LHGRS**GNTPLHRTFFHPD 344
            LHG    G  P +R FF P+
Sbjct:  102 LHGGPGGGTAPSNRRFFDPE 121          
The following BLAST results are available for this feature:
BLAST of EY703443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PIP_ARATH1.189e-1739.84Proline iminopeptidase OS=Arabidopsis thaliana GN=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-019-F05-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703443 ID=EY703443; Name=EY703443; organism=Citrus sinensis; type=EST; length=961bp
CCACGCGTCCGCTTTATCTATTCTGCAGTTCCTACCTTCATCCCATCAAA
ATTTCACTCTCGCGAGGGCAGAACGATTTGCTCATACATACACAACACTT
TGGTGTCAACAATGACCCCAACCTCATCGATTTGATGAAATTAGGAGAGG
AATTACCCGAATACTAATACGAATCTTTATCCTTATGTAAAGCCATACAA
CACATGCATTGACAACGTTTCTGTTATTGCACACAATCTACTGCGACCGG
TTCGGACACCCTACCTATCATCCTTGAGTCCACCCTTCATGGTAGATCCT
GATGAGGCAATACACCACTTCATCGAACATTCTTCCATCCTGATTCTTGG
GTATCATAATATTCGATCAGGCAGGCGCTAGAAATACTGCCCCTCATGCT
AGCTTGGATCAAGACACCACATGGCATCTCATTGGTTACATTACATATCT
GAGACCTCGCCTAACTATTCCTTAATGGCGGGGATTAGATGGATCATGGG
GTATCACACGTCCTCATGCTTACAACCACATTCAGCTCAACAAAGTTACT
GACTAGCTCCTCAGAGGGATCTCCCTCTTGCTAGCGTAAGAGATTGATTG
GTTTTATGGCGGGTGGTGCTGCTGCTATCTACCCTGCTGCATGGGAGCTA
TCTCGAGACCTCATTTCTATAATGAAACAAGTTGTCATGTAGATGCCTAC
AGCATGACGCTAAACTCTCTTGACAAAGCCTACACATTATGCAACTGAAT
GAGCATGGACCACATGGGACATTATGACTGTCGCTCTTATCCAAAAGACC
AAAACATATGACATGGCAGATGACGTTCTTTCATTGTCGTTAGCAGGATC
GACCTCATTATGTTCTTAACAAGCTCGTTGCCGTTCGGATACCTCCTGTT
GGGCAACATGTTAATATACGCACATCACCGCTCCANCGNTAGGGAAGTTT
TATTTTCGCGC
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